RNA–Protein interactions for RNA: ENST00000316099.8

HNF4A-201, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNF4A, Length 6,445 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-201ENST00000316099 FRAS1Q86XX4 4008 aa5.66□□□□□ -1.5
HNF4A-201ENST00000316099 KRTAP10-8P60410 259 aa5.64□□□□□ -1.51
HNF4A-201ENST00000316099 KRTAP13-3Q3SY46 172 aa5.61□□□□□ -1.51
HNF4A-201ENST00000316099 DNAH8Q96JB1 4490 aa5.61□□□□□ -1.51
HNF4A-201ENST00000316099 KRTAP10-4P60372 401 aaPredicted RBP5.6□□□□□ -1.51
HNF4A-201ENST00000316099 XP32Q5T750 250 aa5.59□□□□□ -1.51
HNF4A-201ENST00000316099 DNAH5Q8TE73 4624 aa5.59□□□□□ -1.51
HNF4A-201ENST00000316099 LRP1BQ9NZR2 4599 aa5.54□□□□□ -1.52
HNF4A-201ENST00000316099 VPS13BQ7Z7G8 4022 aa5.52□□□□□ -1.53
HNF4A-201ENST00000316099 HYDINQ4G0P3 5121 aa5.52□□□□□ -1.53
HNF4A-201ENST00000316099 FAT2Q9NYQ8 4349 aa5.51□□□□□ -1.53
HNF4A-201ENST00000316099 SACSQ9NZJ4 4579 aa5.49□□□□□ -1.53
HNF4A-201ENST00000316099 TPRXLQ17RH7 258 aa5.49□□□□□ -1.53
HNF4A-201ENST00000316099 DYNC1H1Q14204 4646 aaKnown RBP5.48□□□□□ -1.53
HNF4A-201ENST00000316099 PKD1P98161 4303 aa5.44□□□□□ -1.54
HNF4A-201ENST00000316099 MT1HL1P0DM35 61 aa5.43□□□□□ -1.54
HNF4A-201ENST00000316099 KRTAP4-5Q9BYR2 181 aa5.4□□□□□ -1.54
HNF4A-201ENST00000316099 FAT1Q14517 4588 aa5.4□□□□□ -1.55
HNF4A-201ENST00000316099 PKHD1P08F94 4074 aa5.39□□□□□ -1.55
HNF4A-201ENST00000316099 KRTAP12-2P59991 146 aa5.36□□□□□ -1.55
HNF4A-201ENST00000316099 APOBP04114 4563 aaKnown RBP5.34□□□□□ -1.56
HNF4A-201ENST00000316099 KRTAP3-1Q9BYR8 98 aa5.32□□□□□ -1.56
HNF4A-201ENST00000316099 KRTAP10-10P60014 251 aa5.3□□□□□ -1.56
HNF4A-201ENST00000316099 RYR2Q92736 4967 aa5.3□□□□□ -1.56
HNF4A-201ENST00000316099 KRTAP13-4Q3LI77 160 aa5.28□□□□□ -1.56
HNF4A-201ENST00000316099 KRTAP12-1P59990 96 aa5.27□□□□□ -1.57
HNF4A-201ENST00000316099 KRTAP17-1Q9BYP8 105 aa5.23□□□□□ -1.57
HNF4A-201ENST00000316099 PRO2289Q9P1D8 64 aa5.21□□□□□ -1.57
HNF4A-201ENST00000316099 HSPG2P98160 4391 aa5.21□□□□□ -1.58
HNF4A-201ENST00000316099 KMT2CQ8NEZ4 4911 aaKnown RBP5.19□□□□□ -1.58
HNF4A-201ENST00000316099 LRP1Q07954 4544 aaKnown RBP5.15□□□□□ -1.59
HNF4A-201ENST00000316099 KRTAP10-6P60371 365 aaPredicted RBP5.13□□□□□ -1.59
HNF4A-201ENST00000316099 RYR3Q15413 4870 aa5.13□□□□□ -1.59
HNF4A-201ENST00000316099 KRTAP15-1Q3LI76 137 aa5.11□□□□□ -1.59
HNF4A-201ENST00000316099 PKHD1L1Q86WI1 4243 aa5.1□□□□□ -1.59
HNF4A-201ENST00000316099 RYR1P21817 5038 aa5.1□□□□□ -1.59
HNF4A-201ENST00000316099 KRTAP3-3Q9BYR6 98 aa5.07□□□□□ -1.6
HNF4A-201ENST00000316099 TNXBP22105 4242 aa5.07□□□□□ -1.6
HNF4A-201ENST00000316099 FAT3Q8TDW7 4589 aa5.06□□□□□ -1.6
HNF4A-201ENST00000316099 KIAA1109Q2LD37 5005 aa5.05□□□□□ -1.6
HNF4A-201ENST00000316099 INE1O15225 51 aa4.99□□□□□ -1.61
HNF4A-201ENST00000316099 MYCBP2O75592 4640 aa4.96□□□□□ -1.61
HNF4A-201ENST00000316099 KRTAP3-2Q9BYR7 98 aa4.96□□□□□ -1.62
HNF4A-201ENST00000316099 KRTAP4-1Q9BYQ7 146 aa4.93□□□□□ -1.62
HNF4A-201ENST00000316099 EPPK1P58107 5090 aaKnown RBP4.9□□□□□ -1.62
HNF4A-201ENST00000316099 LPAP08519 4548 aa4.87□□□□□ -1.63
HNF4A-201ENST00000316099 KRTAP23-1A1A580 65 aa4.8□□□□□ -1.64
HNF4A-201ENST00000316099 LRP2P98164 4655 aa4.78□□□□□ -1.64
HNF4A-201ENST00000316099 HERC2O95714 4834 aa4.78□□□□□ -1.64
HNF4A-201ENST00000316099 BIRC6Q9NR09 4857 aa4.78□□□□□ -1.64
HNF4A-201ENST00000316099 LORP23490 312 aaPredicted RBP4.76□□□□□ -1.65
HNF4A-201ENST00000316099 KRTAP10-12P60413 245 aa4.68□□□□□ -1.66
HNF4A-201ENST00000316099 ABCA13Q86UQ4 5058 aa4.66□□□□□ -1.66
HNF4A-201ENST00000316099 MT1HP80294 61 aa4.64□□□□□ -1.67
HNF4A-201ENST00000316099 CRCT1Q9UGL9 99 aa4.62□□□□□ -1.67
HNF4A-201ENST00000316099 KRTAP12-3P60328 96 aa4.6□□□□□ -1.67
HNF4A-201ENST00000316099 LCE3AQ5TA76 89 aa4.57□□□□□ -1.68
HNF4A-201ENST00000316099 MUC17Q685J3 4493 aa4.57□□□□□ -1.68
HNF4A-201ENST00000316099 HERC1Q15751 4861 aa4.51□□□□□ -1.69
HNF4A-201ENST00000316099 MT2AP02795 61 aa4.49□□□□□ -1.69
HNF4A-201ENST00000316099 KRTAP19-2Q3LHN2 52 aa4.49□□□□□ -1.69
HNF4A-201ENST00000316099 LCE2CQ5TA81 110 aa4.48□□□□□ -1.69
HNF4A-201ENST00000316099 MT1FP04733 61 aa4.46□□□□□ -1.69
HNF4A-201ENST00000316099 PCLOQ9Y6V0 5065 aa4.44□□□□□ -1.7
HNF4A-201ENST00000316099 SPRR2GQ9BYE4 73 aa4.44□□□□□ -1.7
HNF4A-201ENST00000316099 FLGP20930 4061 aaPredicted RBP4.42□□□□□ -1.7
HNF4A-201ENST00000316099 KRTAP19-1Q8IUB9 90 aa4.33□□□□□ -1.72
HNF4A-201ENST00000316099 KRTAP9-8Q9BYQ0 159 aa4.33□□□□□ -1.72
HNF4A-201ENST00000316099 HMCN2Q8NDA2 5059 aa4.31□□□□□ -1.72
HNF4A-201ENST00000316099 MUC2Q02817 5179 aa4.3□□□□□ -1.72
HNF4A-201ENST00000316099 KRTAP10-5P60370 271 aa4.28□□□□□ -1.72
HNF4A-201ENST00000316099 KRTAP19-4Q3LI73 84 aa4.25□□□□□ -1.73
HNF4A-201ENST00000316099 KRTAP8-1Q8IUC2 63 aa4.24□□□□□ -1.73
HNF4A-201ENST00000316099 KRTAP19-8Q3LI54 63 aa4.22□□□□□ -1.73
HNF4A-201ENST00000316099 RNF213Q63HN8 5207 aa4.19□□□□□ -1.74
HNF4A-201ENST00000316099 KRTAP9-3Q9BYQ3 159 aa4.18□□□□□ -1.74
HNF4A-201ENST00000316099 MT1BP07438 61 aa4.17□□□□□ -1.74
HNF4A-201ENST00000316099 FAT4Q6V0I7 4981 aa4.17□□□□□ -1.74
HNF4A-201ENST00000316099 UBR4Q5T4S7 5183 aa4.16□□□□□ -1.74
HNF4A-201ENST00000316099 MT1XP80297 61 aa4.12□□□□□ -1.75
HNF4A-201ENST00000316099 LCE3CQ5T5A8 94 aa4.08□□□□□ -1.76
HNF4A-201ENST00000316099 KRTAP10-7P60409 375 aaPredicted RBP4.08□□□□□ -1.76
HNF4A-201ENST00000316099 LCE2BO14633 110 aa4.05□□□□□ -1.76
HNF4A-201ENST00000316099 SPRR2FQ96RM1 72 aa4.04□□□□□ -1.76
HNF4A-201ENST00000316099 KRTAP19-5Q3LI72 72 aa4.03□□□□□ -1.76
HNF4A-201ENST00000316099 LCE2AQ5TA79 106 aaPredicted RBP4.03□□□□□ -1.76
HNF4A-201ENST00000316099 SPRR5A0A1B0GTR4 108 aa3.95□□□□□ -1.78
HNF4A-201ENST00000316099 SPRR2EP22531 72 aa3.93□□□□□ -1.78
HNF4A-201ENST00000316099 SPRR2BP35325 72 aa3.93□□□□□ -1.78
HNF4A-201ENST00000316099 SPRR2AP35326 72 aa3.93□□□□□ -1.78
HNF4A-201ENST00000316099 KRTAP4-8A0A0G2JLE6 195 aa3.89□□□□□ -1.79
HNF4A-201ENST00000316099 KRTAP4-8Q9BYQ9 185 aa3.89□□□□□ -1.79
HNF4A-201ENST00000316099 SPRR2DP22532 72 aa3.81□□□□□ -1.8
HNF4A-201ENST00000316099 KRTAP19-6Q3LI70 58 aa3.75□□□□□ -1.81
HNF4A-201ENST00000316099 KRTAP9-6A0A140TA67 174 aa3.73□□□□□ -1.81
HNF4A-201ENST00000316099 KRTAP12-4P60329 112 aa3.71□□□□□ -1.82
HNF4A-201ENST00000316099 MT1GP13640 62 aa3.71□□□□□ -1.82
HNF4A-201ENST00000316099 LCE2DQ5TA82 110 aaPredicted RBP3.71□□□□□ -1.82
HNF4A-201ENST00000316099 KRTAP9-2Q9BYQ4 174 aa3.68□□□□□ -1.82
HNF4A-201ENST00000316099 FSIP2Q5CZC0 6907 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms