RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 LCE3AQ5TA76 89 aa2.01□□□□□ -2.09
SMCO3-201ENST00000316048 SPINK6Q6UWN8 80 aa2.01□□□□□ -2.09
SMCO3-201ENST00000316048 TMEM254Q8TBM7 123 aa2.01□□□□□ -2.09
SMCO3-201ENST00000316048 ROMO1P60602 79 aa2□□□□□ -2.09
SMCO3-201ENST00000316048 Q96NJ1 140 aa2□□□□□ -2.09
SMCO3-201ENST00000316048 KMT2AQ03164 3969 aa2□□□□□ -2.09
SMCO3-201ENST00000316048 hDV103S1A0JD37 113 aa2□□□□□ -2.09
SMCO3-201ENST00000316048 ASB16-AS1Q495Z4 193 aa2□□□□□ -2.09
SMCO3-201ENST00000316048 SNURFQ9Y675 71 aa2□□□□□ -2.09
SMCO3-201ENST00000316048 TGP01266 2768 aa2□□□□□ -2.09
SMCO3-201ENST00000316048 P0C880 135 aa1.99□□□□□ -2.09
SMCO3-201ENST00000316048 LIMD2Q9BT23 127 aa1.99□□□□□ -2.09
SMCO3-201ENST00000316048 TP53AIP1Q9HCN2 124 aa1.99□□□□□ -2.09
SMCO3-201ENST00000316048 ALMS1Q8TCU4 4167 aa1.99□□□□□ -2.09
SMCO3-201ENST00000316048 MMP24-AS1A0A0U1RRL7 71 aa1.99□□□□□ -2.09
SMCO3-201ENST00000316048 H3BPC8 53 aa1.99□□□□□ -2.09
SMCO3-201ENST00000316048 SPINK1P00995 79 aa1.99□□□□□ -2.09
SMCO3-201ENST00000316048 DNAH6Q9C0G6 4158 aa1.98□□□□□ -2.09
SMCO3-201ENST00000316048 DNAH17Q9UFH2 4485 aa1.98□□□□□ -2.09
SMCO3-201ENST00000316048 DNAH2Q9P225 4427 aa1.98□□□□□ -2.09
SMCO3-201ENST00000316048 SMR3BP02814 79 aaPredicted RBP1.98□□□□□ -2.09
SMCO3-201ENST00000316048 SPAG11AQ6PDA7 123 aa1.98□□□□□ -2.09
SMCO3-201ENST00000316048 MRPL34Q9BQ48 92 aaKnown RBP1.97□□□□□ -2.09
SMCO3-201ENST00000316048 HECTD4Q9Y4D8 3996 aa1.97□□□□□ -2.09
SMCO3-201ENST00000316048 H0Y9P7 68 aa1.97□□□□□ -2.09
SMCO3-201ENST00000316048 SPTSSBQ8NFR3 76 aa1.97□□□□□ -2.09
SMCO3-201ENST00000316048 LINC00208Q96KT6 92 aa1.97□□□□□ -2.09
SMCO3-201ENST00000316048 TRAV22A0A0B4J277 110 aa1.96□□□□□ -2.1
SMCO3-201ENST00000316048 RPS29P62273 56 aaKnown RBP1.96□□□□□ -2.1
SMCO3-201ENST00000316048 ZCCHC13Q8WW36 166 aaKnown RBP1.96□□□□□ -2.1
SMCO3-201ENST00000316048 SRRM2Q9UQ35 2752 aaKnown RBP1.96□□□□□ -2.1
SMCO3-201ENST00000316048 AHNAKQ09666 5890 aaKnown RBP1.96□□□□□ -2.1
SMCO3-201ENST00000316048 HYDINQ4G0P3 5121 aa1.95□□□□□ -2.1
SMCO3-201ENST00000316048 KRTAP4-3Q9BYR4 195 aa1.95□□□□□ -2.1
SMCO3-201ENST00000316048 Q5VV11 94 aa1.94□□□□□ -2.1
SMCO3-201ENST00000316048 PP632Q6XCG6 107 aa1.94□□□□□ -2.1
SMCO3-201ENST00000316048 FRAS1Q86XX4 4008 aa1.94□□□□□ -2.1
SMCO3-201ENST00000316048 PKD1P98161 4303 aa1.94□□□□□ -2.1
SMCO3-201ENST00000316048 DNAH8Q96JB1 4490 aa1.94□□□□□ -2.1
SMCO3-201ENST00000316048 KRTAP10-4P60372 401 aaPredicted RBP1.94□□□□□ -2.1
SMCO3-201ENST00000316048 DNAH5Q8TE73 4624 aa1.94□□□□□ -2.1
SMCO3-201ENST00000316048 DNAH11Q96DT5 4516 aa1.93□□□□□ -2.1
SMCO3-201ENST00000316048 C20orf166-AS1Q96NR2 134 aa1.93□□□□□ -2.1
SMCO3-201ENST00000316048 LOC101927531A0A1B0GV80 90 aa1.93□□□□□ -2.1
SMCO3-201ENST00000316048 CYP4F30PQ9H0H9 118 aa1.93□□□□□ -2.1
SMCO3-201ENST00000316048 CDC42SE1Q9NRR8 79 aa1.93□□□□□ -2.1
SMCO3-201ENST00000316048 FAT2Q9NYQ8 4349 aa1.92□□□□□ -2.1
SMCO3-201ENST00000316048 Q5VSD8 79 aa1.91□□□□□ -2.1
SMCO3-201ENST00000316048 MIR22HGQ0VDD5 57 aa1.91□□□□□ -2.1
SMCO3-201ENST00000316048 PCOTHQ58A44 107 aa1.91□□□□□ -2.1
SMCO3-201ENST00000316048 LRP1BQ9NZR2 4599 aa1.9□□□□□ -2.1
SMCO3-201ENST00000316048 SACSQ9NZJ4 4579 aa1.89□□□□□ -2.11
SMCO3-201ENST00000316048 CHKB-CPT1BH3BT56 60 aa1.89□□□□□ -2.11
SMCO3-201ENST00000316048 RYR2Q92736 4967 aa1.89□□□□□ -2.11
SMCO3-201ENST00000316048 C9orf92A6NGG3 77 aa1.88□□□□□ -2.11
SMCO3-201ENST00000316048 ACYP2P14621 99 aa1.88□□□□□ -2.11
SMCO3-201ENST00000316048 DYNC1H1Q14204 4646 aaKnown RBP1.87□□□□□ -2.11
SMCO3-201ENST00000316048 CSAG1Q6PB30 78 aa1.87□□□□□ -2.11
SMCO3-201ENST00000316048 VPS13BQ7Z7G8 4022 aa1.87□□□□□ -2.11
SMCO3-201ENST00000316048 COA5Q86WW8 74 aa1.87□□□□□ -2.11
SMCO3-201ENST00000316048 KRTAP5-5Q701N2 237 aaPredicted RBP1.86□□□□□ -2.11
SMCO3-201ENST00000316048 DMAC1Q96GE9 116 aa1.85□□□□□ -2.11
SMCO3-201ENST00000316048 KMT2CQ8NEZ4 4911 aaKnown RBP1.85□□□□□ -2.11
SMCO3-201ENST00000316048 PKHD1P08F94 4074 aa1.85□□□□□ -2.11
SMCO3-201ENST00000316048 APOBP04114 4563 aaKnown RBP1.84□□□□□ -2.11
SMCO3-201ENST00000316048 MT1HL1P0DM35 61 aa1.83□□□□□ -2.12
SMCO3-201ENST00000316048 SPINK7P58062 85 aa1.83□□□□□ -2.12
SMCO3-201ENST00000316048 KRTAP6-3Q3LI67 103 aa1.83□□□□□ -2.12
SMCO3-201ENST00000316048 RPL37P61927 97 aaKnown RBP1.82□□□□□ -2.12
SMCO3-201ENST00000316048 LINC01558Q9Y6Z2 57 aa1.82□□□□□ -2.12
SMCO3-201ENST00000316048 PRR15LQ9BU68 103 aa1.81□□□□□ -2.12
SMCO3-201ENST00000316048 RYR3Q15413 4870 aa1.81□□□□□ -2.12
SMCO3-201ENST00000316048 FAT1Q14517 4588 aa1.81□□□□□ -2.12
SMCO3-201ENST00000316048 FLG2Q5D862 2391 aaPredicted RBP1.8□□□□□ -2.12
SMCO3-201ENST00000316048 RYR1P21817 5038 aa1.8□□□□□ -2.12
SMCO3-201ENST00000316048 TPRXLQ17RH7 258 aa1.79□□□□□ -2.12
SMCO3-201ENST00000316048 OBSCNQ5VST9 7968 aa1.79□□□□□ -2.12
SMCO3-201ENST00000316048 PKHD1L1Q86WI1 4243 aa1.79□□□□□ -2.12
SMCO3-201ENST00000316048 A0A1B0GU69 56 aa1.79□□□□□ -2.12
SMCO3-201ENST00000316048 COX6B2Q6YFQ2 88 aa1.79□□□□□ -2.12
SMCO3-201ENST00000316048 HSPG2P98160 4391 aa1.78□□□□□ -2.12
SMCO3-201ENST00000316048 DMBT1Q9UGM3 2413 aaPredicted RBP1.76□□□□□ -2.13
SMCO3-201ENST00000316048 KIAA1109Q2LD37 5005 aa1.76□□□□□ -2.13
SMCO3-201ENST00000316048 LRP1Q07954 4544 aaKnown RBP1.75□□□□□ -2.13
SMCO3-201ENST00000316048 TNXBP22105 4242 aa1.75□□□□□ -2.13
SMCO3-201ENST00000316048 FAT3Q8TDW7 4589 aa1.75□□□□□ -2.13
SMCO3-201ENST00000316048 EPPK1P58107 5090 aaKnown RBP1.75□□□□□ -2.13
SMCO3-201ENST00000316048 UQCR11O14957 56 aa1.75□□□□□ -2.13
SMCO3-201ENST00000316048 CRCT1Q9UGL9 99 aa1.75□□□□□ -2.13
SMCO3-201ENST00000316048 H1FX-AS1Q4G0G2 97 aa1.74□□□□□ -2.13
SMCO3-201ENST00000316048 PRO2289Q9P1D8 64 aa1.74□□□□□ -2.13
SMCO3-201ENST00000316048 S4R3F8 94 aa1.73□□□□□ -2.13
SMCO3-201ENST00000316048 SPATA8Q6RVD6 105 aa1.72□□□□□ -2.13
SMCO3-201ENST00000316048 KRTAP12-3P60328 96 aa1.72□□□□□ -2.13
SMCO3-201ENST00000316048 KRTAP12-1P59990 96 aa1.71□□□□□ -2.14
SMCO3-201ENST00000316048 MYCBP2O75592 4640 aa1.7□□□□□ -2.14
SMCO3-201ENST00000316048 PCLOQ9Y6V0 5065 aa1.69□□□□□ -2.14
SMCO3-201ENST00000316048 BIRC6Q9NR09 4857 aa1.68□□□□□ -2.14
SMCO3-201ENST00000316048 HERC2O95714 4834 aa1.66□□□□□ -2.14
SMCO3-201ENST00000316048 LCE1CQ5T751 118 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms