RNA–Protein interactions for RNA: ENST00000315965.6

CCDC71L-201, Transcript of coiled-coil domain containing 71 like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC71L, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71L-201ENST00000315965 MT1HP80294 61 aa11.74□□□□□ -0.53
CCDC71L-201ENST00000315965 CHKB-CPT1BH3BT56 60 aa11.71□□□□□ -0.53
CCDC71L-201ENST00000315965 COA5Q86WW8 74 aa11.71□□□□□ -0.53
CCDC71L-201ENST00000315965 KRTAP3-3Q9BYR6 98 aa11.66□□□□□ -0.54
CCDC71L-201ENST00000315965 M0R2T5 61 aa11.64□□□□□ -0.55
CCDC71L-201ENST00000315965 CSAG1Q6PB30 78 aa11.61□□□□□ -0.55
CCDC71L-201ENST00000315965 SPTSSBQ8NFR3 76 aa11.58□□□□□ -0.55
CCDC71L-201ENST00000315965 SERP1Q9Y6X1 66 aa11.55□□□□□ -0.56
CCDC71L-201ENST00000315965 LCE2AQ5TA79 106 aaPredicted RBP11.54□□□□□ -0.56
CCDC71L-201ENST00000315965 RPS28P62857 69 aaKnown RBP11.5□□□□□ -0.57
CCDC71L-201ENST00000315965 KRTAP10-6P60371 365 aaPredicted RBP11.37□□□□□ -0.59
CCDC71L-201ENST00000315965 LORP23490 312 aaPredicted RBP11.32□□□□□ -0.6
CCDC71L-201ENST00000315965 H0YAA0 97 aa11.31□□□□□ -0.6
CCDC71L-201ENST00000315965 KRTAP9-8Q9BYQ0 159 aa11.25□□□□□ -0.61
CCDC71L-201ENST00000315965 ADM2Q7Z4H4 148 aa11.24□□□□□ -0.61
CCDC71L-201ENST00000315965 SMIM26A0A096LP01 95 aa11.2□□□□□ -0.62
CCDC71L-201ENST00000315965 MT2AP02795 61 aa11.19□□□□□ -0.62
CCDC71L-201ENST00000315965 SEC61GP60059 68 aa11.17□□□□□ -0.62
CCDC71L-201ENST00000315965 KRTAP3-2Q9BYR7 98 aa11.15□□□□□ -0.62
CCDC71L-201ENST00000315965 LINC01558Q9Y6Z2 57 aa11.15□□□□□ -0.62
CCDC71L-201ENST00000315965 A0A1B0GU69 56 aa11.11□□□□□ -0.63
CCDC71L-201ENST00000315965 MT1FP04733 61 aa11.11□□□□□ -0.63
CCDC71L-201ENST00000315965 KRTAP10-10P60014 251 aa11.11□□□□□ -0.63
CCDC71L-201ENST00000315965 V9GYY9 64 aa11.1□□□□□ -0.63
CCDC71L-201ENST00000315965 P0C880 135 aa11.09□□□□□ -0.63
CCDC71L-201ENST00000315965 Q1T7F1 81 aa11.07□□□□□ -0.64
CCDC71L-201ENST00000315965 PRR15LQ9BU68 103 aa11.06□□□□□ -0.64
CCDC71L-201ENST00000315965 CRIPTQ9P021 101 aa10.97□□□□□ -0.65
CCDC71L-201ENST00000315965 PSPHP1O15172 72 aa10.89□□□□□ -0.67
CCDC71L-201ENST00000315965 A0A1B0GU33 70 aa10.88□□□□□ -0.67
CCDC71L-201ENST00000315965 R4GN34 69 aa10.88□□□□□ -0.67
CCDC71L-201ENST00000315965 KRTAP9-3Q9BYQ3 159 aa10.86□□□□□ -0.67
CCDC71L-201ENST00000315965 M0QZ58 72 aa10.84□□□□□ -0.67
CCDC71L-201ENST00000315965 SPRR2GQ9BYE4 73 aa10.79□□□□□ -0.68
CCDC71L-201ENST00000315965 Q5VV11 94 aa10.78□□□□□ -0.68
CCDC71L-201ENST00000315965 KRTAP19-1Q8IUB9 90 aa10.77□□□□□ -0.68
CCDC71L-201ENST00000315965 KRTAP13-4Q3LI77 160 aa10.73□□□□□ -0.69
CCDC71L-201ENST00000315965 UQCR11O14957 56 aa10.71□□□□□ -0.69
CCDC71L-201ENST00000315965 SPATA8Q6RVD6 105 aa10.69□□□□□ -0.7
CCDC71L-201ENST00000315965 LCE2DQ5TA82 110 aaPredicted RBP10.65□□□□□ -0.7
CCDC71L-201ENST00000315965 LINC01554Q52M75 96 aa10.64□□□□□ -0.71
CCDC71L-201ENST00000315965 LCE2BO14633 110 aa10.6□□□□□ -0.71
CCDC71L-201ENST00000315965 A6NED7 52 aa10.58□□□□□ -0.72
CCDC71L-201ENST00000315965 KRTAP19-8Q3LI54 63 aa10.56□□□□□ -0.72
CCDC71L-201ENST00000315965 MIR22HGQ0VDD5 57 aa10.55□□□□□ -0.72
CCDC71L-201ENST00000315965 A0A0D9SG42 100 aa10.53□□□□□ -0.72
CCDC71L-201ENST00000315965 A8MU10 97 aa10.48□□□□□ -0.73
CCDC71L-201ENST00000315965 A6NN06 94 aa10.46□□□□□ -0.74
CCDC71L-201ENST00000315965 USH2AO75445 5202 aa10.43□□□□□ -0.74
CCDC71L-201ENST00000315965 MT1BP07438 61 aa10.43□□□□□ -0.74
CCDC71L-201ENST00000315965 KRTAP9-2Q9BYQ4 174 aa10.42□□□□□ -0.74
CCDC71L-201ENST00000315965 PLAC4Q8WY50 150 aa10.39□□□□□ -0.75
CCDC71L-201ENST00000315965 SPINT4Q6UDR6 99 aa10.33□□□□□ -0.76
CCDC71L-201ENST00000315965 CDC42SE1Q9NRR8 79 aa10.33□□□□□ -0.76
CCDC71L-201ENST00000315965 KRTAP12-1P59990 96 aa10.32□□□□□ -0.76
CCDC71L-201ENST00000315965 BRK1Q8WUW1 75 aa10.29□□□□□ -0.76
CCDC71L-201ENST00000315965 KRTAP12-2P59991 146 aa10.27□□□□□ -0.76
CCDC71L-201ENST00000315965 FSIP2Q5CZC0 6907 aa10.27□□□□□ -0.77
CCDC71L-201ENST00000315965 K7ERS5 55 aa10.18□□□□□ -0.78
CCDC71L-201ENST00000315965 PRO0628Q9UI54 55 aa10.18□□□□□ -0.78
CCDC71L-201ENST00000315965 SSPOA2VEC9 5147 aa10.16□□□□□ -0.78
CCDC71L-201ENST00000315965 CAMK2N1Q7Z7J9 78 aa10.15□□□□□ -0.78
CCDC71L-201ENST00000315965 KRTAP19-6Q3LI70 58 aa10.08□□□□□ -0.8
CCDC71L-201ENST00000315965 PRO2289Q9P1D8 64 aa10.02□□□□□ -0.81
CCDC71L-201ENST00000315965 MT1XP80297 61 aa10.01□□□□□ -0.81
CCDC71L-201ENST00000315965 CRCT1Q9UGL9 99 aa10.01□□□□□ -0.81
CCDC71L-201ENST00000315965 KRTAP10-5P60370 271 aa10□□□□□ -0.81
CCDC71L-201ENST00000315965 KRTAP9-6A0A140TA67 174 aa9.88□□□□□ -0.83
CCDC71L-201ENST00000315965 FCGBPQ9Y6R7 5405 aaPredicted RBP9.8□□□□□ -0.84
CCDC71L-201ENST00000315965 C10orf95Q9H7T3 257 aa9.79□□□□□ -0.84
CCDC71L-201ENST00000315965 PMAIP1Q13794 54 aa9.76□□□□□ -0.85
CCDC71L-201ENST00000315965 ROMO1P60602 79 aa9.66□□□□□ -0.86
CCDC71L-201ENST00000315965 TNP1P09430 55 aa9.59□□□□□ -0.87
CCDC71L-201ENST00000315965 KRTAP10-7P60409 375 aaPredicted RBP9.58□□□□□ -0.88
CCDC71L-201ENST00000315965 KRTAP10-12P60413 245 aa9.52□□□□□ -0.89
CCDC71L-201ENST00000315965 KRTAP25-1Q3LHN0 102 aa9.5□□□□□ -0.89
CCDC71L-201ENST00000315965 SVIPQ8NHG7 77 aa9.46□□□□□ -0.9
CCDC71L-201ENST00000315965 KTN1-AS1Q86SY8 53 aa9.41□□□□□ -0.9
CCDC71L-201ENST00000315965 MACF1Q9UPN3 7388 aaKnown RBP9.41□□□□□ -0.9
CCDC71L-201ENST00000315965 KMT2DO14686 5537 aa9.34□□□□□ -0.92
CCDC71L-201ENST00000315965 KRTAP4-8A0A0G2JLE6 195 aa9.29□□□□□ -0.92
CCDC71L-201ENST00000315965 KRTAP4-8Q9BYQ9 185 aa9.29□□□□□ -0.92
CCDC71L-201ENST00000315965 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.27□□□□□ -0.93
CCDC71L-201ENST00000315965 LCE3AQ5TA76 89 aa9.22□□□□□ -0.93
CCDC71L-201ENST00000315965 SYNE2Q8WXH0 6885 aaKnown RBP9.2□□□□□ -0.94
CCDC71L-201ENST00000315965 KRTAP23-1A1A580 65 aa9.2□□□□□ -0.94
CCDC71L-201ENST00000315965 KRTAP8-1Q8IUC2 63 aa9.18□□□□□ -0.94
CCDC71L-201ENST00000315965 PP632Q6XCG6 107 aa9.12□□□□□ -0.95
CCDC71L-201ENST00000315965 PRAC1Q96KF2 57 aa9.02□□□□□ -0.97
CCDC71L-201ENST00000315965 KRTAP19-5Q3LI72 72 aa8.97□□□□□ -0.97
CCDC71L-201ENST00000315965 KRTAP6-3Q3LI67 103 aa8.96□□□□□ -0.97
CCDC71L-201ENST00000315965 KRTAP5-9P26371 169 aa8.94□□□□□ -0.98
CCDC71L-201ENST00000315965 KRTAP19-7Q3SYF9 63 aa8.94□□□□□ -0.98
CCDC71L-201ENST00000315965 KRTAP9-7A8MTY7 169 aa8.91□□□□□ -0.98
CCDC71L-201ENST00000315965 SPRR2FQ96RM1 72 aa8.91□□□□□ -0.98
CCDC71L-201ENST00000315965 KRTAP12-3P60328 96 aa8.88□□□□□ -0.99
CCDC71L-201ENST00000315965 MT1EP04732 61 aa8.82□□□□□ -1
CCDC71L-201ENST00000315965 MUC12Q9UKN1 5478 aa8.75□□□□□ -1.01
CCDC71L-201ENST00000315965 MDN1Q9NU22 5596 aa8.61□□□□□ -1.03
CCDC71L-201ENST00000315965 KRTAP15-1Q3LI76 137 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms