RNA–Protein interactions for RNA: ENST00000315183.11

TNRC6A-201, Transcript of trinucleotide repeat containing 6A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNRC6A, Length 8,303 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-201ENST00000315183 DNAH2Q9P225 4427 aa3.92□□□□□ -1.78
TNRC6A-201ENST00000315183 KRTAP13-4Q3LI77 160 aa3.9□□□□□ -1.78
TNRC6A-201ENST00000315183 DNAH10Q8IVF4 4471 aa3.87□□□□□ -1.79
TNRC6A-201ENST00000315183 PKD1P98161 4303 aa3.86□□□□□ -1.79
TNRC6A-201ENST00000315183 HYDINQ4G0P3 5121 aa3.86□□□□□ -1.79
TNRC6A-201ENST00000315183 DNAH6Q9C0G6 4158 aa3.86□□□□□ -1.79
TNRC6A-201ENST00000315183 KMT2AQ03164 3969 aa3.86□□□□□ -1.79
TNRC6A-201ENST00000315183 PKHD1P08F94 4074 aa3.85□□□□□ -1.79
TNRC6A-201ENST00000315183 INE1O15225 51 aa3.85□□□□□ -1.79
TNRC6A-201ENST00000315183 RYR1P21817 5038 aa3.84□□□□□ -1.79
TNRC6A-201ENST00000315183 KIAA1109Q2LD37 5005 aa3.84□□□□□ -1.8
TNRC6A-201ENST00000315183 RYR2Q92736 4967 aa3.84□□□□□ -1.8
TNRC6A-201ENST00000315183 DNAH17Q9UFH2 4485 aa3.83□□□□□ -1.8
TNRC6A-201ENST00000315183 DNAH11Q96DT5 4516 aa3.83□□□□□ -1.8
TNRC6A-201ENST00000315183 RYR3Q15413 4870 aa3.82□□□□□ -1.8
TNRC6A-201ENST00000315183 KRTAP23-1A1A580 65 aa3.82□□□□□ -1.8
TNRC6A-201ENST00000315183 FAT2Q9NYQ8 4349 aa3.81□□□□□ -1.8
TNRC6A-201ENST00000315183 PCLOQ9Y6V0 5065 aa3.81□□□□□ -1.8
TNRC6A-201ENST00000315183 LRP1BQ9NZR2 4599 aa3.79□□□□□ -1.8
TNRC6A-201ENST00000315183 A0A1B0GVY2 172 aa3.76□□□□□ -1.81
TNRC6A-201ENST00000315183 DNAH5Q8TE73 4624 aa3.74□□□□□ -1.81
TNRC6A-201ENST00000315183 SACSQ9NZJ4 4579 aa3.71□□□□□ -1.82
TNRC6A-201ENST00000315183 KRTAP19-4Q3LI73 84 aa3.7□□□□□ -1.82
TNRC6A-201ENST00000315183 APOBP04114 4563 aaKnown RBP3.7□□□□□ -1.82
TNRC6A-201ENST00000315183 DNAH8Q96JB1 4490 aa3.68□□□□□ -1.82
TNRC6A-201ENST00000315183 KRTAP12-2P59991 146 aa3.66□□□□□ -1.82
TNRC6A-201ENST00000315183 KRTAP15-1Q3LI76 137 aa3.66□□□□□ -1.82
TNRC6A-201ENST00000315183 EPPK1P58107 5090 aaKnown RBP3.66□□□□□ -1.82
TNRC6A-201ENST00000315183 ABCA13Q86UQ4 5058 aa3.65□□□□□ -1.83
TNRC6A-201ENST00000315183 MYCBP2O75592 4640 aa3.64□□□□□ -1.83
TNRC6A-201ENST00000315183 KRTAP12-1P59990 96 aa3.63□□□□□ -1.83
TNRC6A-201ENST00000315183 VPS13BQ7Z7G8 4022 aa3.63□□□□□ -1.83
TNRC6A-201ENST00000315183 ALMS1Q8TCU4 4167 aa3.62□□□□□ -1.83
TNRC6A-201ENST00000315183 PKHD1L1Q86WI1 4243 aa3.62□□□□□ -1.83
TNRC6A-201ENST00000315183 DYNC1H1Q14204 4646 aaKnown RBP3.57□□□□□ -1.84
TNRC6A-201ENST00000315183 KRTAP10-12P60413 245 aa3.54□□□□□ -1.84
TNRC6A-201ENST00000315183 UBR4Q5T4S7 5183 aa3.53□□□□□ -1.84
TNRC6A-201ENST00000315183 FAT1Q14517 4588 aa3.51□□□□□ -1.85
TNRC6A-201ENST00000315183 LRP1Q07954 4544 aaKnown RBP3.49□□□□□ -1.85
TNRC6A-201ENST00000315183 RNF213Q63HN8 5207 aa3.48□□□□□ -1.85
TNRC6A-201ENST00000315183 HSPG2P98160 4391 aa3.46□□□□□ -1.86
TNRC6A-201ENST00000315183 HERC2O95714 4834 aa3.42□□□□□ -1.86
TNRC6A-201ENST00000315183 KRTAP10-6P60371 365 aaPredicted RBP3.41□□□□□ -1.86
TNRC6A-201ENST00000315183 KRTAP12-3P60328 96 aa3.41□□□□□ -1.86
TNRC6A-201ENST00000315183 MUC2Q02817 5179 aa3.4□□□□□ -1.86
TNRC6A-201ENST00000315183 HMCN2Q8NDA2 5059 aa3.39□□□□□ -1.87
TNRC6A-201ENST00000315183 BIRC6Q9NR09 4857 aa3.38□□□□□ -1.87
TNRC6A-201ENST00000315183 LRP2P98164 4655 aa3.37□□□□□ -1.87
TNRC6A-201ENST00000315183 FAT3Q8TDW7 4589 aa3.37□□□□□ -1.87
TNRC6A-201ENST00000315183 KRTAP10-4P60372 401 aaPredicted RBP3.37□□□□□ -1.87
TNRC6A-201ENST00000315183 TNXBP22105 4242 aa3.37□□□□□ -1.87
TNRC6A-201ENST00000315183 KRTAP3-1Q9BYR8 98 aa3.36□□□□□ -1.87
TNRC6A-201ENST00000315183 HERC1Q15751 4861 aa3.36□□□□□ -1.87
TNRC6A-201ENST00000315183 MT1HL1P0DM35 61 aa3.33□□□□□ -1.88
TNRC6A-201ENST00000315183 KRTAP8-1Q8IUC2 63 aa3.27□□□□□ -1.89
TNRC6A-201ENST00000315183 KRTAP3-2Q9BYR7 98 aa3.22□□□□□ -1.89
TNRC6A-201ENST00000315183 FAT4Q6V0I7 4981 aa3.22□□□□□ -1.89
TNRC6A-201ENST00000315183 KRTAP3-3Q9BYR6 98 aa3.19□□□□□ -1.9
TNRC6A-201ENST00000315183 KRTAP10-7P60409 375 aaPredicted RBP3.18□□□□□ -1.9
TNRC6A-201ENST00000315183 KRTAP17-1Q9BYP8 105 aa3.17□□□□□ -1.9
TNRC6A-201ENST00000315183 FLGP20930 4061 aaPredicted RBP3.14□□□□□ -1.91
TNRC6A-201ENST00000315183 KRTAP19-2Q3LHN2 52 aa3.13□□□□□ -1.91
TNRC6A-201ENST00000315183 MUC17Q685J3 4493 aa3.13□□□□□ -1.91
TNRC6A-201ENST00000315183 SPRR2GQ9BYE4 73 aa3.12□□□□□ -1.91
TNRC6A-201ENST00000315183 LORP23490 312 aaPredicted RBP3.1□□□□□ -1.91
TNRC6A-201ENST00000315183 LCE3AQ5TA76 89 aa3.08□□□□□ -1.92
TNRC6A-201ENST00000315183 KRTAP10-5P60370 271 aa3.07□□□□□ -1.92
TNRC6A-201ENST00000315183 CRCT1Q9UGL9 99 aa3.05□□□□□ -1.92
TNRC6A-201ENST00000315183 LPAP08519 4548 aa2.98□□□□□ -1.93
TNRC6A-201ENST00000315183 KRTAP12-4P60329 112 aa2.97□□□□□ -1.93
TNRC6A-201ENST00000315183 LCE3CQ5T5A8 94 aa2.93□□□□□ -1.94
TNRC6A-201ENST00000315183 USH2AO75445 5202 aa2.92□□□□□ -1.94
TNRC6A-201ENST00000315183 SPRR2FQ96RM1 72 aa2.91□□□□□ -1.94
TNRC6A-201ENST00000315183 MT1HP80294 61 aa2.9□□□□□ -1.95
TNRC6A-201ENST00000315183 MT2AP02795 61 aa2.87□□□□□ -1.95
TNRC6A-201ENST00000315183 MT3P25713 68 aa2.87□□□□□ -1.95
TNRC6A-201ENST00000315183 KRTAP19-8Q3LI54 63 aa2.86□□□□□ -1.95
TNRC6A-201ENST00000315183 SSPOA2VEC9 5147 aa2.85□□□□□ -1.95
TNRC6A-201ENST00000315183 KRTAP4-5Q9BYR2 181 aa2.82□□□□□ -1.96
TNRC6A-201ENST00000315183 MT1GP13640 62 aa2.82□□□□□ -1.96
TNRC6A-201ENST00000315183 LCE2BO14633 110 aa2.8□□□□□ -1.96
TNRC6A-201ENST00000315183 MT1FP04733 61 aa2.79□□□□□ -1.96
TNRC6A-201ENST00000315183 KRTAP19-5Q3LI72 72 aa2.77□□□□□ -1.97
TNRC6A-201ENST00000315183 SPRR2EP22531 72 aa2.76□□□□□ -1.97
TNRC6A-201ENST00000315183 SPRR2BP35325 72 aa2.76□□□□□ -1.97
TNRC6A-201ENST00000315183 SPRR2AP35326 72 aa2.76□□□□□ -1.97
TNRC6A-201ENST00000315183 LCE2CQ5TA81 110 aa2.74□□□□□ -1.97
TNRC6A-201ENST00000315183 SPRR2DP22532 72 aa2.73□□□□□ -1.97
TNRC6A-201ENST00000315183 MT1LQ93083 61 aa2.66□□□□□ -1.98
TNRC6A-201ENST00000315183 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.98
TNRC6A-201ENST00000315183 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.99
TNRC6A-201ENST00000315183 KRTAP4-1Q9BYQ7 146 aa2.61□□□□□ -1.99
TNRC6A-201ENST00000315183 SPRR5A0A1B0GTR4 108 aa2.6□□□□□ -1.99
TNRC6A-201ENST00000315183 KRTAP19-1Q8IUB9 90 aa2.6□□□□□ -1.99
TNRC6A-201ENST00000315183 FCGBPQ9Y6R7 5405 aaPredicted RBP2.59□□□□□ -1.99
TNRC6A-201ENST00000315183 KMT2DO14686 5537 aa2.58□□□□□ -2
TNRC6A-201ENST00000315183 KRTAP19-3Q7Z4W3 81 aa2.57□□□□□ -2
TNRC6A-201ENST00000315183 MT1XP80297 61 aa2.54□□□□□ -2
TNRC6A-201ENST00000315183 LCE2AQ5TA79 106 aaPredicted RBP2.53□□□□□ -2
TNRC6A-201ENST00000315183 LCE3BQ5TA77 95 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms