RNA–Protein interactions for RNA: ENST00000311160.13

TNS3-201, Transcript of tensin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNS3, Length 7,618 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNS3-201ENST00000311160 KRTAP23-1A1A580 65 aa4.47□□□□□ -1.69
TNS3-201ENST00000311160 KRTAP10-4P60372 401 aaPredicted RBP4.45□□□□□ -1.7
TNS3-201ENST00000311160 SPRR2FQ96RM1 72 aa4.38□□□□□ -1.71
TNS3-201ENST00000311160 BIRC6Q9NR09 4857 aa4.36□□□□□ -1.71
TNS3-201ENST00000311160 ALMS1Q8TCU4 4167 aa4.35□□□□□ -1.71
TNS3-201ENST00000311160 MT1HL1P0DM35 61 aa4.31□□□□□ -1.72
TNS3-201ENST00000311160 HUWE1Q7Z6Z7 4374 aaKnown RBP4.31□□□□□ -1.72
TNS3-201ENST00000311160 KRTAP3-2Q9BYR7 98 aa4.3□□□□□ -1.72
TNS3-201ENST00000311160 RYR2Q92736 4967 aa4.29□□□□□ -1.72
TNS3-201ENST00000311160 KRTAP3-3Q9BYR6 98 aa4.28□□□□□ -1.72
TNS3-201ENST00000311160 KRTAP4-5Q9BYR2 181 aa4.28□□□□□ -1.72
TNS3-201ENST00000311160 FRAS1Q86XX4 4008 aa4.23□□□□□ -1.73
TNS3-201ENST00000311160 LCE3BQ5TA77 95 aa4.19□□□□□ -1.74
TNS3-201ENST00000311160 PLECQ15149 4684 aaKnown RBP4.19□□□□□ -1.74
TNS3-201ENST00000311160 LYSTQ99698 3801 aa4.18□□□□□ -1.74
TNS3-201ENST00000311160 SPRR2EP22531 72 aa4.17□□□□□ -1.74
TNS3-201ENST00000311160 SPRR2BP35325 72 aa4.17□□□□□ -1.74
TNS3-201ENST00000311160 SPRR2AP35326 72 aa4.17□□□□□ -1.74
TNS3-201ENST00000311160 DNAH1Q9P2D7 4330 aa4.16□□□□□ -1.74
TNS3-201ENST00000311160 DNAH9Q9NYC9 4486 aa4.15□□□□□ -1.75
TNS3-201ENST00000311160 RYR1P21817 5038 aa4.11□□□□□ -1.75
TNS3-201ENST00000311160 KRTAP19-5Q3LI72 72 aa4.1□□□□□ -1.75
TNS3-201ENST00000311160 KIAA1109Q2LD37 5005 aa4.1□□□□□ -1.75
TNS3-201ENST00000311160 KMT2AQ03164 3969 aa4.09□□□□□ -1.75
TNS3-201ENST00000311160 RYR3Q15413 4870 aa4.09□□□□□ -1.75
TNS3-201ENST00000311160 HERC2O95714 4834 aa4.09□□□□□ -1.76
TNS3-201ENST00000311160 DNAH11Q96DT5 4516 aa4.08□□□□□ -1.76
TNS3-201ENST00000311160 ANK2Q01484 3957 aa4.08□□□□□ -1.76
TNS3-201ENST00000311160 CMYA5Q8N3K9 4069 aa4.07□□□□□ -1.76
TNS3-201ENST00000311160 LCE3CQ5T5A8 94 aa4.05□□□□□ -1.76
TNS3-201ENST00000311160 DNAH3Q8TD57 4116 aa4.03□□□□□ -1.76
TNS3-201ENST00000311160 EPPK1P58107 5090 aaKnown RBP4.03□□□□□ -1.76
TNS3-201ENST00000311160 SPRR2DP22532 72 aa4.02□□□□□ -1.77
TNS3-201ENST00000311160 DYNC1H1Q14204 4646 aaKnown RBP4.02□□□□□ -1.77
TNS3-201ENST00000311160 KRTAP12-4P60329 112 aa4.01□□□□□ -1.77
TNS3-201ENST00000311160 DNAH7Q8WXX0 4024 aa4.01□□□□□ -1.77
TNS3-201ENST00000311160 DNAH2Q9P225 4427 aa4.01□□□□□ -1.77
TNS3-201ENST00000311160 DYNC2H1Q8NCM8 4307 aaKnown RBP3.99□□□□□ -1.77
TNS3-201ENST00000311160 VPS13BQ7Z7G8 4022 aa3.98□□□□□ -1.77
TNS3-201ENST00000311160 SACSQ9NZJ4 4579 aa3.97□□□□□ -1.77
TNS3-201ENST00000311160 PCLOQ9Y6V0 5065 aa3.97□□□□□ -1.77
TNS3-201ENST00000311160 HYDINQ4G0P3 5121 aa3.96□□□□□ -1.77
TNS3-201ENST00000311160 KMT2CQ8NEZ4 4911 aaKnown RBP3.96□□□□□ -1.78
TNS3-201ENST00000311160 LCE2BO14633 110 aa3.94□□□□□ -1.78
TNS3-201ENST00000311160 ABCA13Q86UQ4 5058 aa3.94□□□□□ -1.78
TNS3-201ENST00000311160 DNAH5Q8TE73 4624 aa3.94□□□□□ -1.78
TNS3-201ENST00000311160 DNAH10Q8IVF4 4471 aa3.93□□□□□ -1.78
TNS3-201ENST00000311160 SPRR5A0A1B0GTR4 108 aa3.93□□□□□ -1.78
TNS3-201ENST00000311160 DNAH6Q9C0G6 4158 aa3.92□□□□□ -1.78
TNS3-201ENST00000311160 STARD9Q9P2P6 4700 aa3.9□□□□□ -1.78
TNS3-201ENST00000311160 MT1HP80294 61 aa3.89□□□□□ -1.79
TNS3-201ENST00000311160 VPS13DQ5THJ4 4388 aa3.88□□□□□ -1.79
TNS3-201ENST00000311160 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
TNS3-201ENST00000311160 KRTAP17-1Q9BYP8 105 aa3.88□□□□□ -1.79
TNS3-201ENST00000311160 PRKDCP78527 4128 aaKnown RBP3.88□□□□□ -1.79
TNS3-201ENST00000311160 MT1GP13640 62 aa3.88□□□□□ -1.79
TNS3-201ENST00000311160 FAT2Q9NYQ8 4349 aa3.84□□□□□ -1.79
TNS3-201ENST00000311160 LCE3DQ9BYE3 92 aa3.83□□□□□ -1.8
TNS3-201ENST00000311160 LCE2CQ5TA81 110 aa3.82□□□□□ -1.8
TNS3-201ENST00000311160 DNAH17Q9UFH2 4485 aa3.82□□□□□ -1.8
TNS3-201ENST00000311160 MT2AP02795 61 aa3.8□□□□□ -1.8
TNS3-201ENST00000311160 LRP1BQ9NZR2 4599 aa3.78□□□□□ -1.8
TNS3-201ENST00000311160 KRTAP4-1Q9BYQ7 146 aa3.77□□□□□ -1.81
TNS3-201ENST00000311160 LCE2DQ5TA82 110 aaPredicted RBP3.76□□□□□ -1.81
TNS3-201ENST00000311160 HECTD4Q9Y4D8 3996 aa3.75□□□□□ -1.81
TNS3-201ENST00000311160 SPRR2GQ9BYE4 73 aa3.73□□□□□ -1.81
TNS3-201ENST00000311160 LCE1BQ5T7P3 118 aa3.72□□□□□ -1.81
TNS3-201ENST00000311160 FAT1Q14517 4588 aa3.72□□□□□ -1.81
TNS3-201ENST00000311160 HERC1Q15751 4861 aa3.72□□□□□ -1.81
TNS3-201ENST00000311160 MT1FP04733 61 aa3.71□□□□□ -1.82
TNS3-201ENST00000311160 APOBP04114 4563 aaKnown RBP3.7□□□□□ -1.82
TNS3-201ENST00000311160 MT4P47944 62 aa3.7□□□□□ -1.82
TNS3-201ENST00000311160 HMCN2Q8NDA2 5059 aa3.66□□□□□ -1.82
TNS3-201ENST00000311160 DNAH8Q96JB1 4490 aa3.64□□□□□ -1.83
TNS3-201ENST00000311160 LCE1DQ5T752 114 aa3.63□□□□□ -1.83
TNS3-201ENST00000311160 MYCBP2O75592 4640 aa3.62□□□□□ -1.83
TNS3-201ENST00000311160 KRTAP19-4Q3LI73 84 aa3.61□□□□□ -1.83
TNS3-201ENST00000311160 PRM1P04553 51 aa3.57□□□□□ -1.84
TNS3-201ENST00000311160 RNF213Q63HN8 5207 aa3.55□□□□□ -1.84
TNS3-201ENST00000311160 HSPG2P98160 4391 aa3.53□□□□□ -1.84
TNS3-201ENST00000311160 MT3P25713 68 aa3.52□□□□□ -1.85
TNS3-201ENST00000311160 LCE5AQ5TCM9 118 aa3.52□□□□□ -1.85
TNS3-201ENST00000311160 UBR4Q5T4S7 5183 aa3.51□□□□□ -1.85
TNS3-201ENST00000311160 FLGP20930 4061 aaPredicted RBP3.51□□□□□ -1.85
TNS3-201ENST00000311160 PKHD1L1Q86WI1 4243 aa3.5□□□□□ -1.85
TNS3-201ENST00000311160 KRTAP4-8A0A0G2JLE6 195 aa3.47□□□□□ -1.85
TNS3-201ENST00000311160 KRTAP4-8Q9BYQ9 185 aa3.47□□□□□ -1.85
TNS3-201ENST00000311160 PKD1P98161 4303 aa3.45□□□□□ -1.86
TNS3-201ENST00000311160 PKHD1P08F94 4074 aa3.45□□□□□ -1.86
TNS3-201ENST00000311160 LCE1CQ5T751 118 aa3.44□□□□□ -1.86
TNS3-201ENST00000311160 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
TNS3-201ENST00000311160 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
TNS3-201ENST00000311160 LCE1AQ5T7P2 110 aa3.44□□□□□ -1.86
TNS3-201ENST00000311160 FAT3Q8TDW7 4589 aa3.43□□□□□ -1.86
TNS3-201ENST00000311160 KRTAP19-1Q8IUB9 90 aa3.4□□□□□ -1.86
TNS3-201ENST00000311160 LRP1Q07954 4544 aaKnown RBP3.4□□□□□ -1.87
TNS3-201ENST00000311160 KRTAP19-8Q3LI54 63 aa3.36□□□□□ -1.87
TNS3-201ENST00000311160 MT1XP80297 61 aa3.34□□□□□ -1.87
TNS3-201ENST00000311160 LCE4AQ5TA78 99 aa3.33□□□□□ -1.88
TNS3-201ENST00000311160 KRTAP19-3Q7Z4W3 81 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms