RNA–Protein interactions for RNA: ENST00000309602.4

LRFN4-201, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN4, Length 2,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-201ENST00000309602 MIR22HGQ0VDD5 57 aa10.46□□□□□ -0.73
LRFN4-201ENST00000309602 MYCBP2O75592 4640 aa10.39□□□□□ -0.75
LRFN4-201ENST00000309602 COX6B2Q6YFQ2 88 aa10.38□□□□□ -0.75
LRFN4-201ENST00000309602 DMBT1Q9UGM3 2413 aaPredicted RBP10.37□□□□□ -0.75
LRFN4-201ENST00000309602 RPL37P61927 97 aaKnown RBP10.33□□□□□ -0.76
LRFN4-201ENST00000309602 XP32Q5T750 250 aa10.31□□□□□ -0.76
LRFN4-201ENST00000309602 MT1HL1P0DM35 61 aa10.27□□□□□ -0.76
LRFN4-201ENST00000309602 KRTAP4-5Q9BYR2 181 aa10.24□□□□□ -0.77
LRFN4-201ENST00000309602 CSAG1Q6PB30 78 aa10.22□□□□□ -0.77
LRFN4-201ENST00000309602 H0YAA0 97 aa10.21□□□□□ -0.77
LRFN4-201ENST00000309602 A0A1B0GU33 70 aa10.18□□□□□ -0.78
LRFN4-201ENST00000309602 BIRC6Q9NR09 4857 aa10.18□□□□□ -0.78
LRFN4-201ENST00000309602 H1FX-AS1Q4G0G2 97 aa10.16□□□□□ -0.78
LRFN4-201ENST00000309602 ABCA13Q86UQ4 5058 aa10.15□□□□□ -0.78
LRFN4-201ENST00000309602 KRTAP3-3Q9BYR6 98 aa10.12□□□□□ -0.79
LRFN4-201ENST00000309602 HERC2O95714 4834 aa10.08□□□□□ -0.8
LRFN4-201ENST00000309602 S4R3F8 94 aa10.03□□□□□ -0.8
LRFN4-201ENST00000309602 KRTAP10-6P60371 365 aaPredicted RBP9.97□□□□□ -0.81
LRFN4-201ENST00000309602 TPRXLQ17RH7 258 aa9.97□□□□□ -0.81
LRFN4-201ENST00000309602 LPAP08519 4548 aa9.95□□□□□ -0.82
LRFN4-201ENST00000309602 LRP2P98164 4655 aa9.95□□□□□ -0.82
LRFN4-201ENST00000309602 KRTAP3-2Q9BYR7 98 aa9.93□□□□□ -0.82
LRFN4-201ENST00000309602 PCLOQ9Y6V0 5065 aa9.86□□□□□ -0.83
LRFN4-201ENST00000309602 KRTAP13-4Q3LI77 160 aa9.85□□□□□ -0.83
LRFN4-201ENST00000309602 ROMO1P60602 79 aa9.83□□□□□ -0.84
LRFN4-201ENST00000309602 KRTAP25-1Q3LHN0 102 aa9.82□□□□□ -0.84
LRFN4-201ENST00000309602 P0C880 135 aa9.81□□□□□ -0.84
LRFN4-201ENST00000309602 K7ERS5 55 aa9.77□□□□□ -0.85
LRFN4-201ENST00000309602 J3QL48 77 aa9.75□□□□□ -0.85
LRFN4-201ENST00000309602 A0A0D9SG42 100 aa9.73□□□□□ -0.85
LRFN4-201ENST00000309602 HERC1Q15751 4861 aa9.68□□□□□ -0.86
LRFN4-201ENST00000309602 SEC61BP60468 96 aaKnown RBP9.59□□□□□ -0.87
LRFN4-201ENST00000309602 CRIPTQ9P021 101 aa9.59□□□□□ -0.87
LRFN4-201ENST00000309602 MUC17Q685J3 4493 aa9.56□□□□□ -0.88
LRFN4-201ENST00000309602 KRTAP4-1Q9BYQ7 146 aa9.52□□□□□ -0.89
LRFN4-201ENST00000309602 KRTAP12-2P59991 146 aa9.51□□□□□ -0.89
LRFN4-201ENST00000309602 M0QZ58 72 aa9.46□□□□□ -0.9
LRFN4-201ENST00000309602 KRTAP12-1P59990 96 aa9.45□□□□□ -0.9
LRFN4-201ENST00000309602 SPINT4Q6UDR6 99 aa9.42□□□□□ -0.9
LRFN4-201ENST00000309602 HMCN2Q8NDA2 5059 aa9.4□□□□□ -0.9
LRFN4-201ENST00000309602 KRTAP19-2Q3LHN2 52 aa9.34□□□□□ -0.91
LRFN4-201ENST00000309602 MUC2Q02817 5179 aa9.28□□□□□ -0.92
LRFN4-201ENST00000309602 R4GN34 69 aa9.27□□□□□ -0.92
LRFN4-201ENST00000309602 LORP23490 312 aaPredicted RBP9.26□□□□□ -0.93
LRFN4-201ENST00000309602 C10orf95Q9H7T3 257 aa9.23□□□□□ -0.93
LRFN4-201ENST00000309602 NDUFAF8A1L188 74 aa9.2□□□□□ -0.94
LRFN4-201ENST00000309602 KRTAP15-1Q3LI76 137 aa9.16□□□□□ -0.94
LRFN4-201ENST00000309602 UBR4Q5T4S7 5183 aa9.12□□□□□ -0.95
LRFN4-201ENST00000309602 FLGP20930 4061 aaPredicted RBP9.07□□□□□ -0.96
LRFN4-201ENST00000309602 RNF213Q63HN8 5207 aa9.04□□□□□ -0.96
LRFN4-201ENST00000309602 FAT4Q6V0I7 4981 aa8.88□□□□□ -0.99
LRFN4-201ENST00000309602 A0A0A0MQY5 61 aa8.86□□□□□ -0.99
LRFN4-201ENST00000309602 LCE2CQ5TA81 110 aa8.84□□□□□ -0.99
LRFN4-201ENST00000309602 CAMK2N1Q7Z7J9 78 aa8.78□□□□□ -1
LRFN4-201ENST00000309602 MT1HP80294 61 aa8.6□□□□□ -1.03
LRFN4-201ENST00000309602 M0R2T5 61 aa8.58□□□□□ -1.04
LRFN4-201ENST00000309602 SPRR2GQ9BYE4 73 aa8.54□□□□□ -1.04
LRFN4-201ENST00000309602 LUZP6Q538Z0 58 aa8.52□□□□□ -1.05
LRFN4-201ENST00000309602 KRTAP19-1Q8IUB9 90 aa8.52□□□□□ -1.05
LRFN4-201ENST00000309602 PP632Q6XCG6 107 aa8.5□□□□□ -1.05
LRFN4-201ENST00000309602 TNP1P09430 55 aa8.43□□□□□ -1.06
LRFN4-201ENST00000309602 MT2AP02795 61 aa8.43□□□□□ -1.06
LRFN4-201ENST00000309602 MT1FP04733 61 aa8.43□□□□□ -1.06
LRFN4-201ENST00000309602 PLAC4Q8WY50 150 aa8.42□□□□□ -1.06
LRFN4-201ENST00000309602 KRTAP10-10P60014 251 aa8.39□□□□□ -1.07
LRFN4-201ENST00000309602 KRTAP9-8Q9BYQ0 159 aa8.39□□□□□ -1.07
LRFN4-201ENST00000309602 KRTAP23-1A1A580 65 aa8.28□□□□□ -1.08
LRFN4-201ENST00000309602 KRTAP19-8Q3LI54 63 aa8.2□□□□□ -1.1
LRFN4-201ENST00000309602 MT1BP07438 61 aa8.11□□□□□ -1.11
LRFN4-201ENST00000309602 LCE2AQ5TA79 106 aaPredicted RBP8.1□□□□□ -1.11
LRFN4-201ENST00000309602 LCE3AQ5TA76 89 aa8.04□□□□□ -1.12
LRFN4-201ENST00000309602 KRTAP9-3Q9BYQ3 159 aa8.04□□□□□ -1.12
LRFN4-201ENST00000309602 KRTAP10-5P60370 271 aa8.02□□□□□ -1.13
LRFN4-201ENST00000309602 MT1XP80297 61 aa8.01□□□□□ -1.13
LRFN4-201ENST00000309602 SPRR5A0A1B0GTR4 108 aa7.9□□□□□ -1.15
LRFN4-201ENST00000309602 KRTAP8-1Q8IUC2 63 aa7.83□□□□□ -1.16
LRFN4-201ENST00000309602 KRTAP10-12P60413 245 aa7.78□□□□□ -1.16
LRFN4-201ENST00000309602 KRTAP10-7P60409 375 aaPredicted RBP7.77□□□□□ -1.17
LRFN4-201ENST00000309602 USH2AO75445 5202 aa7.75□□□□□ -1.17
LRFN4-201ENST00000309602 LCE2BO14633 110 aa7.74□□□□□ -1.17
LRFN4-201ENST00000309602 PRO2289Q9P1D8 64 aa7.7□□□□□ -1.18
LRFN4-201ENST00000309602 KRTAP12-3P60328 96 aa7.66□□□□□ -1.18
LRFN4-201ENST00000309602 FSIP2Q5CZC0 6907 aa7.6□□□□□ -1.19
LRFN4-201ENST00000309602 KRTAP19-5Q3LI72 72 aa7.41□□□□□ -1.22
LRFN4-201ENST00000309602 SSPOA2VEC9 5147 aa7.4□□□□□ -1.22
LRFN4-201ENST00000309602 KMT2DO14686 5537 aa7.35□□□□□ -1.23
LRFN4-201ENST00000309602 KRTAP4-8A0A0G2JLE6 195 aa7.33□□□□□ -1.24
LRFN4-201ENST00000309602 KRTAP4-8Q9BYQ9 185 aa7.33□□□□□ -1.24
LRFN4-201ENST00000309602 LCE2DQ5TA82 110 aaPredicted RBP7.26□□□□□ -1.25
LRFN4-201ENST00000309602 INE1O15225 51 aa7.23□□□□□ -1.25
LRFN4-201ENST00000309602 LCE3CQ5T5A8 94 aa7.2□□□□□ -1.26
LRFN4-201ENST00000309602 KRTAP19-7Q3SYF9 63 aa7.14□□□□□ -1.27
LRFN4-201ENST00000309602 KRTAP9-2Q9BYQ4 174 aa7.12□□□□□ -1.27
LRFN4-201ENST00000309602 KRTAP19-6Q3LI70 58 aa7.09□□□□□ -1.27
LRFN4-201ENST00000309602 FCGBPQ9Y6R7 5405 aaPredicted RBP7.07□□□□□ -1.28
LRFN4-201ENST00000309602 KRTAP9-6A8MVA2 160 aa6.95□□□□□ -1.3
LRFN4-201ENST00000309602 MT1EP04732 61 aa6.95□□□□□ -1.3
LRFN4-201ENST00000309602 KRTAP4-7Q9BYR0 210 aa6.95□□□□□ -1.3
LRFN4-201ENST00000309602 MT1LQ93083 61 aa6.91□□□□□ -1.3
LRFN4-201ENST00000309602 CRCT1Q9UGL9 99 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms