RNA–Protein interactions for RNA: ENST00000306627.7

UBE2E1-201, Transcript of ubiquitin conjugating enzyme E2 E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E1, Length 1,511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E1-201ENST00000306627 H1FX-AS1Q4G0G2 97 aa9.61□□□□□ -0.87
UBE2E1-201ENST00000306627 CHKB-CPT1BH3BT56 60 aa9.58□□□□□ -0.88
UBE2E1-201ENST00000306627 LCA10Q71F78 164 aa9.52□□□□□ -0.88
UBE2E1-201ENST00000306627 S4R3F8 94 aa9.52□□□□□ -0.88
UBE2E1-201ENST00000306627 KRTAP3-3Q9BYR6 98 aa9.51□□□□□ -0.89
UBE2E1-201ENST00000306627 LCE2CQ5TA81 110 aa9.48□□□□□ -0.89
UBE2E1-201ENST00000306627 SMIM26A0A096LP01 95 aa9.46□□□□□ -0.89
UBE2E1-201ENST00000306627 FLGP20930 4061 aaPredicted RBP9.44□□□□□ -0.9
UBE2E1-201ENST00000306627 SPTSSBQ8NFR3 76 aa9.37□□□□□ -0.91
UBE2E1-201ENST00000306627 KRTAP9-6A0A140TA67 174 aa9.36□□□□□ -0.91
UBE2E1-201ENST00000306627 Q1T7F1 81 aa9.32□□□□□ -0.92
UBE2E1-201ENST00000306627 LINC01558Q9Y6Z2 57 aa9.31□□□□□ -0.92
UBE2E1-201ENST00000306627 CSAG1Q6PB30 78 aa9.3□□□□□ -0.92
UBE2E1-201ENST00000306627 SVIPQ8NHG7 77 aa9.28□□□□□ -0.92
UBE2E1-201ENST00000306627 MT1HP80294 61 aa9.27□□□□□ -0.93
UBE2E1-201ENST00000306627 LCE2DQ5TA82 110 aaPredicted RBP9.24□□□□□ -0.93
UBE2E1-201ENST00000306627 V9GYY9 64 aa9.24□□□□□ -0.93
UBE2E1-201ENST00000306627 PRR15LQ9BU68 103 aa9.21□□□□□ -0.94
UBE2E1-201ENST00000306627 PSPHP1O15172 72 aa9.2□□□□□ -0.94
UBE2E1-201ENST00000306627 A0A1B0GU69 56 aa9.16□□□□□ -0.94
UBE2E1-201ENST00000306627 KRTAP3-2Q9BYR7 98 aa9.15□□□□□ -0.95
UBE2E1-201ENST00000306627 Q5VV11 94 aa9.13□□□□□ -0.95
UBE2E1-201ENST00000306627 KRTAP10-6P60371 365 aaPredicted RBP9.11□□□□□ -0.95
UBE2E1-201ENST00000306627 ADM2Q7Z4H4 148 aa9.1□□□□□ -0.95
UBE2E1-201ENST00000306627 M0R2T5 61 aa9.1□□□□□ -0.95
UBE2E1-201ENST00000306627 SEC61GP60059 68 aa9.1□□□□□ -0.95
UBE2E1-201ENST00000306627 H0YAA0 97 aa9.08□□□□□ -0.96
UBE2E1-201ENST00000306627 P0C880 135 aa9.08□□□□□ -0.96
UBE2E1-201ENST00000306627 CRCT1Q9UGL9 99 aa9.06□□□□□ -0.96
UBE2E1-201ENST00000306627 FSIP2Q5CZC0 6907 aa9.03□□□□□ -0.96
UBE2E1-201ENST00000306627 LORP23490 312 aaPredicted RBP9.02□□□□□ -0.97
UBE2E1-201ENST00000306627 A0A1B0GU33 70 aa8.94□□□□□ -0.98
UBE2E1-201ENST00000306627 KRTAP9-8Q9BYQ0 159 aa8.92□□□□□ -0.98
UBE2E1-201ENST00000306627 MT2AP02795 61 aa8.88□□□□□ -0.99
UBE2E1-201ENST00000306627 KRTAP13-4Q3LI77 160 aa8.88□□□□□ -0.99
UBE2E1-201ENST00000306627 A6NED7 52 aa8.87□□□□□ -0.99
UBE2E1-201ENST00000306627 UQCR11O14957 56 aa8.85□□□□□ -0.99
UBE2E1-201ENST00000306627 SPATA8Q6RVD6 105 aa8.85□□□□□ -0.99
UBE2E1-201ENST00000306627 MT1FP04733 61 aa8.84□□□□□ -0.99
UBE2E1-201ENST00000306627 A8MU10 97 aa8.78□□□□□ -1
UBE2E1-201ENST00000306627 MIR22HGQ0VDD5 57 aa8.77□□□□□ -1.01
UBE2E1-201ENST00000306627 KRTAP10-10P60014 251 aa8.76□□□□□ -1.01
UBE2E1-201ENST00000306627 M0QZ58 72 aa8.75□□□□□ -1.01
UBE2E1-201ENST00000306627 R4GN34 69 aa8.75□□□□□ -1.01
UBE2E1-201ENST00000306627 CDC42SE1Q9NRR8 79 aa8.71□□□□□ -1.01
UBE2E1-201ENST00000306627 BRK1Q8WUW1 75 aa8.7□□□□□ -1.02
UBE2E1-201ENST00000306627 CRIPTQ9P021 101 aa8.7□□□□□ -1.02
UBE2E1-201ENST00000306627 A0A0D9SG42 100 aa8.66□□□□□ -1.02
UBE2E1-201ENST00000306627 KRTAP19-1Q8IUB9 90 aa8.64□□□□□ -1.03
UBE2E1-201ENST00000306627 LINC01554Q52M75 96 aa8.61□□□□□ -1.03
UBE2E1-201ENST00000306627 SPRR2GQ9BYE4 73 aa8.61□□□□□ -1.03
UBE2E1-201ENST00000306627 KRTAP9-3Q9BYQ3 159 aa8.6□□□□□ -1.03
UBE2E1-201ENST00000306627 USH2AO75445 5202 aa8.52□□□□□ -1.05
UBE2E1-201ENST00000306627 KRTAP12-1P59990 96 aa8.49□□□□□ -1.05
UBE2E1-201ENST00000306627 SSPOA2VEC9 5147 aa8.48□□□□□ -1.05
UBE2E1-201ENST00000306627 KRTAP12-2P59991 146 aa8.48□□□□□ -1.05
UBE2E1-201ENST00000306627 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.45□□□□□ -1.06
UBE2E1-201ENST00000306627 SPINT4Q6UDR6 99 aa8.44□□□□□ -1.06
UBE2E1-201ENST00000306627 PRO0628Q9UI54 55 aa8.44□□□□□ -1.06
UBE2E1-201ENST00000306627 A6NN06 94 aa8.42□□□□□ -1.06
UBE2E1-201ENST00000306627 KRTAP19-8Q3LI54 63 aa8.41□□□□□ -1.06
UBE2E1-201ENST00000306627 KRTAP9-7A8MTY7 169 aa8.4□□□□□ -1.06
UBE2E1-201ENST00000306627 LCE2BO14633 110 aa8.4□□□□□ -1.06
UBE2E1-201ENST00000306627 MT1BP07438 61 aa8.34□□□□□ -1.07
UBE2E1-201ENST00000306627 K7ERS5 55 aa8.32□□□□□ -1.08
UBE2E1-201ENST00000306627 FCGBPQ9Y6R7 5405 aaPredicted RBP8.32□□□□□ -1.08
UBE2E1-201ENST00000306627 PLAC4Q8WY50 150 aa8.25□□□□□ -1.09
UBE2E1-201ENST00000306627 PMAIP1Q13794 54 aa8.21□□□□□ -1.1
UBE2E1-201ENST00000306627 CAMK2N1Q7Z7J9 78 aa8.17□□□□□ -1.1
UBE2E1-201ENST00000306627 KRTAP19-6Q3LI70 58 aa8.13□□□□□ -1.11
UBE2E1-201ENST00000306627 MACF1Q9UPN3 7388 aaKnown RBP8.09□□□□□ -1.11
UBE2E1-201ENST00000306627 C10orf95Q9H7T3 257 aa8.07□□□□□ -1.12
UBE2E1-201ENST00000306627 MT1XP80297 61 aa8.05□□□□□ -1.12
UBE2E1-201ENST00000306627 KRTAP10-5P60370 271 aa8.03□□□□□ -1.12
UBE2E1-201ENST00000306627 ROMO1P60602 79 aa8.03□□□□□ -1.12
UBE2E1-201ENST00000306627 SYNE2Q8WXH0 6885 aaKnown RBP8.01□□□□□ -1.13
UBE2E1-201ENST00000306627 PRO2289Q9P1D8 64 aa7.86□□□□□ -1.15
UBE2E1-201ENST00000306627 KRTAP6-3Q3LI67 103 aa7.84□□□□□ -1.15
UBE2E1-201ENST00000306627 KTN1-AS1Q86SY8 53 aa7.83□□□□□ -1.16
UBE2E1-201ENST00000306627 PRAC1Q96KF2 57 aa7.78□□□□□ -1.16
UBE2E1-201ENST00000306627 TNP1P09430 55 aa7.76□□□□□ -1.17
UBE2E1-201ENST00000306627 KRTAP25-1Q3LHN0 102 aa7.75□□□□□ -1.17
UBE2E1-201ENST00000306627 KRTAP10-7P60409 375 aaPredicted RBP7.73□□□□□ -1.17
UBE2E1-201ENST00000306627 KRTAP10-12P60413 245 aa7.6□□□□□ -1.19
UBE2E1-201ENST00000306627 NEBP20929 6669 aa7.54□□□□□ -1.2
UBE2E1-201ENST00000306627 LCE3AQ5TA76 89 aa7.52□□□□□ -1.2
UBE2E1-201ENST00000306627 MUC12Q9UKN1 5478 aa7.51□□□□□ -1.21
UBE2E1-201ENST00000306627 KMT2DO14686 5537 aa7.49□□□□□ -1.21
UBE2E1-201ENST00000306627 KRTAP4-8A0A0G2JLE6 195 aa7.47□□□□□ -1.21
UBE2E1-201ENST00000306627 KRTAP23-1A1A580 65 aa7.47□□□□□ -1.21
UBE2E1-201ENST00000306627 KRTAP4-8Q9BYQ9 185 aa7.47□□□□□ -1.21
UBE2E1-201ENST00000306627 PP632Q6XCG6 107 aa7.43□□□□□ -1.22
UBE2E1-201ENST00000306627 KRTAP5-9P26371 169 aa7.42□□□□□ -1.22
UBE2E1-201ENST00000306627 KRTAP20-1Q3LI63 56 aa7.34□□□□□ -1.23
UBE2E1-201ENST00000306627 KRTAP8-1Q8IUC2 63 aa7.33□□□□□ -1.24
UBE2E1-201ENST00000306627 MDN1Q9NU22 5596 aa7.26□□□□□ -1.25
UBE2E1-201ENST00000306627 KRTAP19-5Q3LI72 72 aa7.24□□□□□ -1.25
UBE2E1-201ENST00000306627 KRTAP12-3P60328 96 aa7.19□□□□□ -1.26
UBE2E1-201ENST00000306627 KRTAP19-7Q3SYF9 63 aa7.18□□□□□ -1.26
UBE2E1-201ENST00000306627 SPRR2FQ96RM1 72 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms