RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 A8MUU9 505 aa7.65□□□□□ -1.18
SDC2-201ENST00000302190 H1FX-AS1Q4G0G2 97 aa7.62□□□□□ -1.19
SDC2-201ENST00000302190 Q5VSD8 79 aa7.6□□□□□ -1.19
SDC2-201ENST00000302190 COX6B2Q6YFQ2 88 aa7.59□□□□□ -1.19
SDC2-201ENST00000302190 RYR1P21817 5038 aa7.58□□□□□ -1.2
SDC2-201ENST00000302190 P0C880 135 aa7.55□□□□□ -1.2
SDC2-201ENST00000302190 S4R3F8 94 aa7.54□□□□□ -1.2
SDC2-201ENST00000302190 FAT3Q8TDW7 4589 aa7.52□□□□□ -1.21
SDC2-201ENST00000302190 H0YAA0 97 aa7.52□□□□□ -1.21
SDC2-201ENST00000302190 NDUFAF8A1L188 74 aa7.51□□□□□ -1.21
SDC2-201ENST00000302190 KRTAP4-5Q9BYR2 181 aa7.5□□□□□ -1.21
SDC2-201ENST00000302190 PKHD1L1Q86WI1 4243 aa7.49□□□□□ -1.21
SDC2-201ENST00000302190 RPL37P61927 97 aaKnown RBP7.48□□□□□ -1.21
SDC2-201ENST00000302190 KRTAP10-4P60372 401 aaPredicted RBP7.46□□□□□ -1.21
SDC2-201ENST00000302190 C20orf166-AS1Q96NR2 134 aa7.46□□□□□ -1.22
SDC2-201ENST00000302190 A0A0A0MQY5 61 aa7.46□□□□□ -1.22
SDC2-201ENST00000302190 J3QL48 77 aa7.44□□□□□ -1.22
SDC2-201ENST00000302190 ABCA13Q86UQ4 5058 aa7.43□□□□□ -1.22
SDC2-201ENST00000302190 RPS29P62273 56 aaKnown RBP7.42□□□□□ -1.22
SDC2-201ENST00000302190 HERC2O95714 4834 aa7.35□□□□□ -1.23
SDC2-201ENST00000302190 KRTAP3-1Q9BYR8 98 aa7.34□□□□□ -1.23
SDC2-201ENST00000302190 C10orf95Q9H7T3 257 aa7.33□□□□□ -1.24
SDC2-201ENST00000302190 TNXBP22105 4242 aa7.32□□□□□ -1.24
SDC2-201ENST00000302190 R4GN34 69 aa7.31□□□□□ -1.24
SDC2-201ENST00000302190 PCLOQ9Y6V0 5065 aa7.29□□□□□ -1.24
SDC2-201ENST00000302190 M0QZ58 72 aa7.29□□□□□ -1.24
SDC2-201ENST00000302190 XP32Q5T750 250 aa7.28□□□□□ -1.24
SDC2-201ENST00000302190 BIRC6Q9NR09 4857 aa7.26□□□□□ -1.25
SDC2-201ENST00000302190 LPAP08519 4548 aa7.26□□□□□ -1.25
SDC2-201ENST00000302190 HERC1Q15751 4861 aa7.23□□□□□ -1.25
SDC2-201ENST00000302190 CAMK2N1Q7Z7J9 78 aa7.21□□□□□ -1.25
SDC2-201ENST00000302190 KRTAP10-8P60410 259 aa7.19□□□□□ -1.26
SDC2-201ENST00000302190 TPRXLQ17RH7 258 aa7.18□□□□□ -1.26
SDC2-201ENST00000302190 LRP2P98164 4655 aa7.16□□□□□ -1.26
SDC2-201ENST00000302190 MT1HL1P0DM35 61 aa7.15□□□□□ -1.26
SDC2-201ENST00000302190 LUZP6Q538Z0 58 aa7.14□□□□□ -1.27
SDC2-201ENST00000302190 KRTAP15-1Q3LI76 137 aa7.1□□□□□ -1.27
SDC2-201ENST00000302190 MUC2Q02817 5179 aa7.09□□□□□ -1.27
SDC2-201ENST00000302190 KRTAP13-4Q3LI77 160 aa7.09□□□□□ -1.28
SDC2-201ENST00000302190 SEC61BP60468 96 aaKnown RBP7.06□□□□□ -1.28
SDC2-201ENST00000302190 KRTAP12-2P59991 146 aa7□□□□□ -1.29
SDC2-201ENST00000302190 KRTAP10-6P60371 365 aaPredicted RBP7□□□□□ -1.29
SDC2-201ENST00000302190 M0R2T5 61 aa6.98□□□□□ -1.29
SDC2-201ENST00000302190 RNF213Q63HN8 5207 aa6.93□□□□□ -1.3
SDC2-201ENST00000302190 KRTAP3-3Q9BYR6 98 aa6.92□□□□□ -1.3
SDC2-201ENST00000302190 UBR4Q5T4S7 5183 aa6.88□□□□□ -1.31
SDC2-201ENST00000302190 KRTAP3-2Q9BYR7 98 aa6.86□□□□□ -1.31
SDC2-201ENST00000302190 KRTAP12-1P59990 96 aa6.85□□□□□ -1.31
SDC2-201ENST00000302190 PLAC4Q8WY50 150 aa6.77□□□□□ -1.33
SDC2-201ENST00000302190 HMCN2Q8NDA2 5059 aa6.76□□□□□ -1.33
SDC2-201ENST00000302190 FAT4Q6V0I7 4981 aa6.71□□□□□ -1.33
SDC2-201ENST00000302190 KRTAP4-1Q9BYQ7 146 aa6.63□□□□□ -1.35
SDC2-201ENST00000302190 LORP23490 312 aaPredicted RBP6.57□□□□□ -1.36
SDC2-201ENST00000302190 TNP1P09430 55 aa6.56□□□□□ -1.36
SDC2-201ENST00000302190 MUC17Q685J3 4493 aa6.54□□□□□ -1.36
SDC2-201ENST00000302190 KRTAP10-10P60014 251 aa6.39□□□□□ -1.39
SDC2-201ENST00000302190 PP632Q6XCG6 107 aa6.38□□□□□ -1.39
SDC2-201ENST00000302190 FLGP20930 4061 aaPredicted RBP6.2□□□□□ -1.42
SDC2-201ENST00000302190 KRTAP19-2Q3LHN2 52 aa6.2□□□□□ -1.42
SDC2-201ENST00000302190 LCE2CQ5TA81 110 aa6.14□□□□□ -1.43
SDC2-201ENST00000302190 FSIP2Q5CZC0 6907 aa6.11□□□□□ -1.43
SDC2-201ENST00000302190 MT1HP80294 61 aa6.05□□□□□ -1.44
SDC2-201ENST00000302190 PRO2289Q9P1D8 64 aa6.05□□□□□ -1.44
SDC2-201ENST00000302190 USH2AO75445 5202 aa5.99□□□□□ -1.45
SDC2-201ENST00000302190 LCE3AQ5TA76 89 aa5.91□□□□□ -1.46
SDC2-201ENST00000302190 MT1FP04733 61 aa5.84□□□□□ -1.47
SDC2-201ENST00000302190 INE1O15225 51 aa5.82□□□□□ -1.48
SDC2-201ENST00000302190 MT2AP02795 61 aa5.81□□□□□ -1.48
SDC2-201ENST00000302190 KRTAP9-8Q9BYQ0 159 aa5.8□□□□□ -1.48
SDC2-201ENST00000302190 SPRR5A0A1B0GTR4 108 aa5.77□□□□□ -1.49
SDC2-201ENST00000302190 KRTAP10-12P60413 245 aa5.74□□□□□ -1.49
SDC2-201ENST00000302190 LCE2AQ5TA79 106 aaPredicted RBP5.7□□□□□ -1.5
SDC2-201ENST00000302190 KRTAP12-3P60328 96 aa5.7□□□□□ -1.5
SDC2-201ENST00000302190 KRTAP23-1A1A580 65 aa5.7□□□□□ -1.5
SDC2-201ENST00000302190 KRTAP19-1Q8IUB9 90 aa5.68□□□□□ -1.5
SDC2-201ENST00000302190 SPRR2GQ9BYE4 73 aa5.66□□□□□ -1.5
SDC2-201ENST00000302190 KMT2DO14686 5537 aa5.56□□□□□ -1.52
SDC2-201ENST00000302190 KRTAP9-3Q9BYQ3 159 aa5.55□□□□□ -1.52
SDC2-201ENST00000302190 LCE2BO14633 110 aa5.54□□□□□ -1.52
SDC2-201ENST00000302190 SSPOA2VEC9 5147 aa5.46□□□□□ -1.53
SDC2-201ENST00000302190 KRTAP10-7P60409 375 aaPredicted RBP5.45□□□□□ -1.54
SDC2-201ENST00000302190 MT1BP07438 61 aa5.44□□□□□ -1.54
SDC2-201ENST00000302190 CRCT1Q9UGL9 99 aa5.41□□□□□ -1.54
SDC2-201ENST00000302190 KRTAP8-1Q8IUC2 63 aa5.39□□□□□ -1.55
SDC2-201ENST00000302190 MT1XP80297 61 aa5.38□□□□□ -1.55
SDC2-201ENST00000302190 KRTAP10-5P60370 271 aa5.36□□□□□ -1.55
SDC2-201ENST00000302190 KRTAP19-5Q3LI72 72 aa5.34□□□□□ -1.56
SDC2-201ENST00000302190 KRTAP19-8Q3LI54 63 aa5.32□□□□□ -1.56
SDC2-201ENST00000302190 KRTAP4-8A0A0G2JLE6 195 aa5.27□□□□□ -1.57
SDC2-201ENST00000302190 KRTAP4-8Q9BYQ9 185 aa5.27□□□□□ -1.57
SDC2-201ENST00000302190 OBSCNQ5VST9 7968 aa5.25□□□□□ -1.57
SDC2-201ENST00000302190 FCGBPQ9Y6R7 5405 aaPredicted RBP5.21□□□□□ -1.57
SDC2-201ENST00000302190 SYNE2Q8WXH0 6885 aaKnown RBP5.19□□□□□ -1.58
SDC2-201ENST00000302190 MACF1Q9UPN3 7388 aaKnown RBP5.16□□□□□ -1.58
SDC2-201ENST00000302190 KRTAP9-2Q9BYQ4 174 aa5.16□□□□□ -1.58
SDC2-201ENST00000302190 LCE3CQ5T5A8 94 aa5.15□□□□□ -1.59
SDC2-201ENST00000302190 SYNE1Q8NF91 8797 aaKnown RBP5.12□□□□□ -1.59
SDC2-201ENST00000302190 KRTAP4-7Q9BYR0 210 aa5.1□□□□□ -1.59
SDC2-201ENST00000302190 DSTQ03001 7570 aaKnown RBP5.09□□□□□ -1.59
SDC2-201ENST00000302190 MUC12Q9UKN1 5478 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms