RNA–Protein interactions for RNA: ENST00000301904.3

SCARA3-201, Transcript of scavenger receptor class A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARA3, Length 3,510 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARA3-201ENST00000301904 S4R3F8 94 aa5.43□□□□□ -1.54
SCARA3-201ENST00000301904 KRTAP10-6P60371 365 aaPredicted RBP5.41□□□□□ -1.54
SCARA3-201ENST00000301904 PLAC4Q8WY50 150 aa5.41□□□□□ -1.54
SCARA3-201ENST00000301904 FAT1Q14517 4588 aa5.38□□□□□ -1.55
SCARA3-201ENST00000301904 PKD1P98161 4303 aa5.36□□□□□ -1.55
SCARA3-201ENST00000301904 KRTAP12-2P59991 146 aa5.36□□□□□ -1.55
SCARA3-201ENST00000301904 KRTAP3-3Q9BYR6 98 aa5.35□□□□□ -1.55
SCARA3-201ENST00000301904 KRTAP3-2Q9BYR7 98 aa5.34□□□□□ -1.55
SCARA3-201ENST00000301904 PKHD1P08F94 4074 aa5.34□□□□□ -1.55
SCARA3-201ENST00000301904 KRTAP10-8P60410 259 aa5.32□□□□□ -1.56
SCARA3-201ENST00000301904 MYCBP2O75592 4640 aa5.32□□□□□ -1.56
SCARA3-201ENST00000301904 DYNC1H1Q14204 4646 aaKnown RBP5.27□□□□□ -1.57
SCARA3-201ENST00000301904 SACSQ9NZJ4 4579 aa5.26□□□□□ -1.57
SCARA3-201ENST00000301904 J3QL48 77 aa5.24□□□□□ -1.57
SCARA3-201ENST00000301904 KRTAP12-1P59990 96 aa5.22□□□□□ -1.57
SCARA3-201ENST00000301904 HSPG2P98160 4391 aa5.22□□□□□ -1.57
SCARA3-201ENST00000301904 RPS29P62273 56 aaKnown RBP5.21□□□□□ -1.58
SCARA3-201ENST00000301904 CAMK2N1Q7Z7J9 78 aa5.21□□□□□ -1.58
SCARA3-201ENST00000301904 APOBP04114 4563 aaKnown RBP5.19□□□□□ -1.58
SCARA3-201ENST00000301904 LRP1Q07954 4544 aaKnown RBP5.19□□□□□ -1.58
SCARA3-201ENST00000301904 XP32Q5T750 250 aa5.14□□□□□ -1.59
SCARA3-201ENST00000301904 M0QZ58 72 aa5.14□□□□□ -1.59
SCARA3-201ENST00000301904 LPAP08519 4548 aa5.13□□□□□ -1.59
SCARA3-201ENST00000301904 Q5VSD8 79 aa5.12□□□□□ -1.59
SCARA3-201ENST00000301904 FAT3Q8TDW7 4589 aa5.1□□□□□ -1.59
SCARA3-201ENST00000301904 R4GN34 69 aa5.1□□□□□ -1.59
SCARA3-201ENST00000301904 KMT2CQ8NEZ4 4911 aaKnown RBP5.1□□□□□ -1.59
SCARA3-201ENST00000301904 PKHD1L1Q86WI1 4243 aa5.1□□□□□ -1.59
SCARA3-201ENST00000301904 KRTAP10-4P60372 401 aaPredicted RBP5.05□□□□□ -1.6
SCARA3-201ENST00000301904 A0A1B0GVY2 172 aa5.05□□□□□ -1.6
SCARA3-201ENST00000301904 LRP2P98164 4655 aa4.99□□□□□ -1.61
SCARA3-201ENST00000301904 KIAA1109Q2LD37 5005 aa4.96□□□□□ -1.62
SCARA3-201ENST00000301904 LORP23490 312 aaPredicted RBP4.94□□□□□ -1.62
SCARA3-201ENST00000301904 TNXBP22105 4242 aa4.93□□□□□ -1.62
SCARA3-201ENST00000301904 RYR3Q15413 4870 aa4.91□□□□□ -1.62
SCARA3-201ENST00000301904 RYR2Q92736 4967 aa4.9□□□□□ -1.62
SCARA3-201ENST00000301904 PRO2289Q9P1D8 64 aa4.89□□□□□ -1.63
SCARA3-201ENST00000301904 KRTAP4-5Q9BYR2 181 aa4.85□□□□□ -1.63
SCARA3-201ENST00000301904 RYR1P21817 5038 aa4.84□□□□□ -1.63
SCARA3-201ENST00000301904 PP632Q6XCG6 107 aa4.82□□□□□ -1.64
SCARA3-201ENST00000301904 KRTAP17-1Q9BYP8 105 aa4.79□□□□□ -1.64
SCARA3-201ENST00000301904 EPPK1P58107 5090 aaKnown RBP4.79□□□□□ -1.64
SCARA3-201ENST00000301904 ABCA13Q86UQ4 5058 aa4.72□□□□□ -1.65
SCARA3-201ENST00000301904 TNP1P09430 55 aa4.71□□□□□ -1.66
SCARA3-201ENST00000301904 MT1HL1P0DM35 61 aa4.69□□□□□ -1.66
SCARA3-201ENST00000301904 HERC2O95714 4834 aa4.64□□□□□ -1.67
SCARA3-201ENST00000301904 MUC2Q02817 5179 aa4.63□□□□□ -1.67
SCARA3-201ENST00000301904 INE1O15225 51 aa4.63□□□□□ -1.67
SCARA3-201ENST00000301904 KRTAP4-1Q9BYQ7 146 aa4.6□□□□□ -1.67
SCARA3-201ENST00000301904 MUC17Q685J3 4493 aa4.53□□□□□ -1.68
SCARA3-201ENST00000301904 BIRC6Q9NR09 4857 aa4.52□□□□□ -1.69
SCARA3-201ENST00000301904 M0R2T5 61 aa4.47□□□□□ -1.69
SCARA3-201ENST00000301904 HERC1Q15751 4861 aa4.45□□□□□ -1.7
SCARA3-201ENST00000301904 SPRR5A0A1B0GTR4 108 aa4.44□□□□□ -1.7
SCARA3-201ENST00000301904 PCLOQ9Y6V0 5065 aa4.39□□□□□ -1.71
SCARA3-201ENST00000301904 FAT4Q6V0I7 4981 aa4.37□□□□□ -1.71
SCARA3-201ENST00000301904 KRTAP19-2Q3LHN2 52 aa4.36□□□□□ -1.71
SCARA3-201ENST00000301904 LCE3AQ5TA76 89 aa4.36□□□□□ -1.71
SCARA3-201ENST00000301904 RNF213Q63HN8 5207 aa4.3□□□□□ -1.72
SCARA3-201ENST00000301904 FLGP20930 4061 aaPredicted RBP4.26□□□□□ -1.73
SCARA3-201ENST00000301904 UBR4Q5T4S7 5183 aa4.24□□□□□ -1.73
SCARA3-201ENST00000301904 KRTAP23-1A1A580 65 aa4.24□□□□□ -1.73
SCARA3-201ENST00000301904 HMCN2Q8NDA2 5059 aa4.22□□□□□ -1.73
SCARA3-201ENST00000301904 KRTAP19-1Q8IUB9 90 aa4.16□□□□□ -1.74
SCARA3-201ENST00000301904 KRTAP10-10P60014 251 aa4.09□□□□□ -1.75
SCARA3-201ENST00000301904 SPRR2GQ9BYE4 73 aa4.08□□□□□ -1.76
SCARA3-201ENST00000301904 KRTAP12-3P60328 96 aa4.07□□□□□ -1.76
SCARA3-201ENST00000301904 KRTAP8-1Q8IUC2 63 aa4.05□□□□□ -1.76
SCARA3-201ENST00000301904 LCE2CQ5TA81 110 aa4.01□□□□□ -1.77
SCARA3-201ENST00000301904 MT1FP04733 61 aa4.01□□□□□ -1.77
SCARA3-201ENST00000301904 KRTAP10-12P60413 245 aa4□□□□□ -1.77
SCARA3-201ENST00000301904 KMT2DO14686 5537 aa3.99□□□□□ -1.77
SCARA3-201ENST00000301904 KRTAP10-7P60409 375 aaPredicted RBP3.98□□□□□ -1.77
SCARA3-201ENST00000301904 FSIP2Q5CZC0 6907 aa3.98□□□□□ -1.77
SCARA3-201ENST00000301904 KRTAP10-5P60370 271 aa3.96□□□□□ -1.77
SCARA3-201ENST00000301904 MT2AP02795 61 aa3.95□□□□□ -1.78
SCARA3-201ENST00000301904 MT1HP80294 61 aa3.95□□□□□ -1.78
SCARA3-201ENST00000301904 MT1XP80297 61 aa3.95□□□□□ -1.78
SCARA3-201ENST00000301904 MT1BP07438 61 aa3.89□□□□□ -1.79
SCARA3-201ENST00000301904 USH2AO75445 5202 aa3.87□□□□□ -1.79
SCARA3-201ENST00000301904 KRTAP9-8Q9BYQ0 159 aa3.85□□□□□ -1.79
SCARA3-201ENST00000301904 KRTAP19-5Q3LI72 72 aa3.85□□□□□ -1.79
SCARA3-201ENST00000301904 KRTAP9-6A8MVA2 160 aa3.82□□□□□ -1.8
SCARA3-201ENST00000301904 LCE3CQ5T5A8 94 aa3.81□□□□□ -1.8
SCARA3-201ENST00000301904 KRTAP19-8Q3LI54 63 aa3.81□□□□□ -1.8
SCARA3-201ENST00000301904 KRTAP4-7Q9BYR0 210 aa3.81□□□□□ -1.8
SCARA3-201ENST00000301904 KRTAP4-8A0A0G2JLE6 195 aa3.76□□□□□ -1.81
SCARA3-201ENST00000301904 KRTAP4-8Q9BYQ9 185 aa3.76□□□□□ -1.81
SCARA3-201ENST00000301904 SYNE1Q8NF91 8797 aaKnown RBP3.72□□□□□ -1.81
SCARA3-201ENST00000301904 OBSCNQ5VST9 7968 aa3.69□□□□□ -1.82
SCARA3-201ENST00000301904 CRCT1Q9UGL9 99 aa3.68□□□□□ -1.82
SCARA3-201ENST00000301904 KRTAP9-3Q9BYQ3 159 aa3.65□□□□□ -1.83
SCARA3-201ENST00000301904 KRTAP12-4P60329 112 aa3.64□□□□□ -1.83
SCARA3-201ENST00000301904 LCE2AQ5TA79 106 aaPredicted RBP3.62□□□□□ -1.83
SCARA3-201ENST00000301904 KRTAP2-3P0C7H8 128 aa3.61□□□□□ -1.83
SCARA3-201ENST00000301904 KRTAP2-4Q9BYR9 128 aa3.61□□□□□ -1.83
SCARA3-201ENST00000301904 KRTAP2-1Q9BYU5 128 aa3.61□□□□□ -1.83
SCARA3-201ENST00000301904 LCE2BO14633 110 aa3.56□□□□□ -1.84
SCARA3-201ENST00000301904 LOC100996750A0A140TA64 210 aa3.52□□□□□ -1.85
SCARA3-201ENST00000301904 KRTAP19-7Q3SYF9 63 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms