RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 DNAH1Q9P2D7 4330 aa4.62□□□□□ -1.67
GCN1-201ENST00000300648 HUWE1Q7Z6Z7 4374 aaKnown RBP4.61□□□□□ -1.67
GCN1-201ENST00000300648 KRTAP8-1Q8IUC2 63 aa4.58□□□□□ -1.68
GCN1-201ENST00000300648 ANK3Q12955 4377 aaKnown RBP4.57□□□□□ -1.68
GCN1-201ENST00000300648 CSMD2Q7Z408 3487 aa4.56□□□□□ -1.68
GCN1-201ENST00000300648 LYSTQ99698 3801 aa4.55□□□□□ -1.68
GCN1-201ENST00000300648 CSMD3Q7Z407 3707 aa4.53□□□□□ -1.69
GCN1-201ENST00000300648 SPRR2GQ9BYE4 73 aa4.51□□□□□ -1.69
GCN1-201ENST00000300648 KRTAP4-5Q9BYR2 181 aa4.46□□□□□ -1.69
GCN1-201ENST00000300648 LORP23490 312 aaPredicted RBP4.41□□□□□ -1.7
GCN1-201ENST00000300648 DNAH7Q8WXX0 4024 aa4.39□□□□□ -1.71
GCN1-201ENST00000300648 LCE3CQ5T5A8 94 aa4.37□□□□□ -1.71
GCN1-201ENST00000300648 ZNF469Q96JG9 3925 aaPredicted RBP4.36□□□□□ -1.71
GCN1-201ENST00000300648 KRTAP10-7P60409 375 aaPredicted RBP4.36□□□□□ -1.71
GCN1-201ENST00000300648 ANK2Q01484 3957 aa4.36□□□□□ -1.71
GCN1-201ENST00000300648 DNAH3Q8TD57 4116 aa4.36□□□□□ -1.71
GCN1-201ENST00000300648 HECTD4Q9Y4D8 3996 aa4.33□□□□□ -1.72
GCN1-201ENST00000300648 MT1HP80294 61 aa4.29□□□□□ -1.72
GCN1-201ENST00000300648 MT3P25713 68 aa4.28□□□□□ -1.72
GCN1-201ENST00000300648 DNAH2Q9P225 4427 aa4.27□□□□□ -1.73
GCN1-201ENST00000300648 DNAH10Q8IVF4 4471 aa4.27□□□□□ -1.73
GCN1-201ENST00000300648 MT2AP02795 61 aa4.24□□□□□ -1.73
GCN1-201ENST00000300648 DNAH6Q9C0G6 4158 aa4.23□□□□□ -1.73
GCN1-201ENST00000300648 KRTAP19-5Q3LI72 72 aa4.22□□□□□ -1.73
GCN1-201ENST00000300648 KMT2AQ03164 3969 aa4.16□□□□□ -1.74
GCN1-201ENST00000300648 DNAH11Q96DT5 4516 aa4.16□□□□□ -1.74
GCN1-201ENST00000300648 VPS13BQ7Z7G8 4022 aa4.15□□□□□ -1.74
GCN1-201ENST00000300648 KRTAP19-8Q3LI54 63 aa4.15□□□□□ -1.75
GCN1-201ENST00000300648 DNAH9Q9NYC9 4486 aa4.12□□□□□ -1.75
GCN1-201ENST00000300648 SPRR2FQ96RM1 72 aa4.12□□□□□ -1.75
GCN1-201ENST00000300648 KRTAP4-1Q9BYQ7 146 aa4.09□□□□□ -1.75
GCN1-201ENST00000300648 DNAH5Q8TE73 4624 aa4.09□□□□□ -1.75
GCN1-201ENST00000300648 FAT2Q9NYQ8 4349 aa4.07□□□□□ -1.76
GCN1-201ENST00000300648 FRAS1Q86XX4 4008 aa4.07□□□□□ -1.76
GCN1-201ENST00000300648 MT1FP04733 61 aa4.07□□□□□ -1.76
GCN1-201ENST00000300648 SPRR5A0A1B0GTR4 108 aa4.07□□□□□ -1.76
GCN1-201ENST00000300648 DYNC2H1Q8NCM8 4307 aaKnown RBP4.06□□□□□ -1.76
GCN1-201ENST00000300648 VPS13DQ5THJ4 4388 aa4.02□□□□□ -1.77
GCN1-201ENST00000300648 KRTAP12-4P60329 112 aa4□□□□□ -1.77
GCN1-201ENST00000300648 LRP1Q07954 4544 aaKnown RBP4□□□□□ -1.77
GCN1-201ENST00000300648 PRKDCP78527 4128 aaKnown RBP3.98□□□□□ -1.77
GCN1-201ENST00000300648 DNAH17Q9UFH2 4485 aa3.96□□□□□ -1.77
GCN1-201ENST00000300648 FLGP20930 4061 aaPredicted RBP3.95□□□□□ -1.78
GCN1-201ENST00000300648 PLECQ15149 4684 aaKnown RBP3.93□□□□□ -1.78
GCN1-201ENST00000300648 KRTAP19-1Q8IUB9 90 aa3.93□□□□□ -1.78
GCN1-201ENST00000300648 MT1GP13640 62 aa3.92□□□□□ -1.78
GCN1-201ENST00000300648 LCE3BQ5TA77 95 aa3.91□□□□□ -1.78
GCN1-201ENST00000300648 DYNC1H1Q14204 4646 aaKnown RBP3.9□□□□□ -1.79
GCN1-201ENST00000300648 LCE3DQ9BYE3 92 aa3.88□□□□□ -1.79
GCN1-201ENST00000300648 DNAH8Q96JB1 4490 aa3.88□□□□□ -1.79
GCN1-201ENST00000300648 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
GCN1-201ENST00000300648 MT1XP80297 61 aa3.85□□□□□ -1.79
GCN1-201ENST00000300648 LCE2BO14633 110 aa3.84□□□□□ -1.79
GCN1-201ENST00000300648 SPRR2EP22531 72 aa3.83□□□□□ -1.8
GCN1-201ENST00000300648 SPRR2BP35325 72 aa3.83□□□□□ -1.8
GCN1-201ENST00000300648 SPRR2AP35326 72 aa3.83□□□□□ -1.8
GCN1-201ENST00000300648 STARD9Q9P2P6 4700 aa3.82□□□□□ -1.8
GCN1-201ENST00000300648 LRP1BQ9NZR2 4599 aa3.79□□□□□ -1.8
GCN1-201ENST00000300648 SPRR2DP22532 72 aa3.77□□□□□ -1.81
GCN1-201ENST00000300648 RYR1P21817 5038 aa3.76□□□□□ -1.81
GCN1-201ENST00000300648 SACSQ9NZJ4 4579 aa3.75□□□□□ -1.81
GCN1-201ENST00000300648 MT1LQ93083 61 aa3.75□□□□□ -1.81
GCN1-201ENST00000300648 KRTAP9-8Q9BYQ0 159 aa3.74□□□□□ -1.81
GCN1-201ENST00000300648 PKHD1L1Q86WI1 4243 aa3.74□□□□□ -1.81
GCN1-201ENST00000300648 FAT1Q14517 4588 aa3.73□□□□□ -1.81
GCN1-201ENST00000300648 MT1BP07438 61 aa3.73□□□□□ -1.81
GCN1-201ENST00000300648 DNHD1Q96M86 4753 aa3.71□□□□□ -1.82
GCN1-201ENST00000300648 APOBP04114 4563 aaKnown RBP3.71□□□□□ -1.82
GCN1-201ENST00000300648 PKHD1P08F94 4074 aa3.71□□□□□ -1.82
GCN1-201ENST00000300648 KRTAP9-3Q9BYQ3 159 aa3.68□□□□□ -1.82
GCN1-201ENST00000300648 PKD1P98161 4303 aa3.68□□□□□ -1.82
GCN1-201ENST00000300648 KRTAP19-3Q7Z4W3 81 aa3.67□□□□□ -1.82
GCN1-201ENST00000300648 HSPG2P98160 4391 aa3.61□□□□□ -1.83
GCN1-201ENST00000300648 LCE2CQ5TA81 110 aa3.58□□□□□ -1.84
GCN1-201ENST00000300648 MT1EP04732 61 aa3.57□□□□□ -1.84
GCN1-201ENST00000300648 FAT3Q8TDW7 4589 aa3.55□□□□□ -1.84
GCN1-201ENST00000300648 RYR3Q15413 4870 aa3.54□□□□□ -1.84
GCN1-201ENST00000300648 PRM1P04553 51 aa3.51□□□□□ -1.85
GCN1-201ENST00000300648 KRTAP19-6Q3LI70 58 aa3.51□□□□□ -1.85
GCN1-201ENST00000300648 MYCBP2O75592 4640 aa3.51□□□□□ -1.85
GCN1-201ENST00000300648 KRTAP17-1Q9BYP8 105 aa3.5□□□□□ -1.85
GCN1-201ENST00000300648 KRTAP4-8A0A0G2JLE6 195 aa3.46□□□□□ -1.86
GCN1-201ENST00000300648 KRTAP4-8Q9BYQ9 185 aa3.46□□□□□ -1.86
GCN1-201ENST00000300648 PCLOQ9Y6V0 5065 aa3.45□□□□□ -1.86
GCN1-201ENST00000300648 MT1MQ8N339 61 aa3.45□□□□□ -1.86
GCN1-201ENST00000300648 RYR2Q92736 4967 aa3.43□□□□□ -1.86
GCN1-201ENST00000300648 LCE2DQ5TA82 110 aaPredicted RBP3.43□□□□□ -1.86
GCN1-201ENST00000300648 KRTAP19-2Q3LHN2 52 aa3.4□□□□□ -1.87
GCN1-201ENST00000300648 LCE1AQ5T7P2 110 aa3.35□□□□□ -1.87
GCN1-201ENST00000300648 KRTAP2-3P0C7H8 128 aa3.33□□□□□ -1.88
GCN1-201ENST00000300648 KRTAP2-4Q9BYR9 128 aa3.33□□□□□ -1.88
GCN1-201ENST00000300648 KRTAP2-1Q9BYU5 128 aa3.33□□□□□ -1.88
GCN1-201ENST00000300648 TNXBP22105 4242 aa3.32□□□□□ -1.88
GCN1-201ENST00000300648 MT1AP04731 61 aa3.32□□□□□ -1.88
GCN1-201ENST00000300648 KRTAP9-2Q9BYQ4 174 aa3.31□□□□□ -1.88
GCN1-201ENST00000300648 KIAA1109Q2LD37 5005 aa3.28□□□□□ -1.88
GCN1-201ENST00000300648 HERC1Q15751 4861 aa3.27□□□□□ -1.89
GCN1-201ENST00000300648 LRP2P98164 4655 aa3.26□□□□□ -1.89
GCN1-201ENST00000300648 KRTAP4-7Q9BYR0 210 aa3.25□□□□□ -1.89
GCN1-201ENST00000300648 HERC2O95714 4834 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms