RNA–Protein interactions for RNA: ENST00000299240.10

TTC17-202, Transcript of tetratricopeptide repeat domain 17, humanhuman

TSL 1 (best) BASIC

Gene TTC17, Length 3,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-202ENST00000299240 SEC61GP60059 68 aa6.45□□□□□ -1.38
TTC17-202ENST00000299240 FAT4Q6V0I7 4981 aa6.45□□□□□ -1.38
TTC17-202ENST00000299240 Q5VV11 94 aa6.44□□□□□ -1.38
TTC17-202ENST00000299240 RBM12B-AS1Q9P1G2 102 aa6.43□□□□□ -1.38
TTC17-202ENST00000299240 SEC61BP60468 96 aaKnown RBP6.42□□□□□ -1.38
TTC17-202ENST00000299240 Q1T7F1 81 aa6.42□□□□□ -1.38
TTC17-202ENST00000299240 LCA10Q71F78 164 aa6.42□□□□□ -1.38
TTC17-202ENST00000299240 V9GYY9 64 aa6.4□□□□□ -1.38
TTC17-202ENST00000299240 KRTAP4-1Q9BYQ7 146 aa6.4□□□□□ -1.39
TTC17-202ENST00000299240 S4R3F8 94 aa6.39□□□□□ -1.39
TTC17-202ENST00000299240 A0A0D9SG42 100 aa6.38□□□□□ -1.39
TTC17-202ENST00000299240 SPATA8Q6RVD6 105 aa6.36□□□□□ -1.39
TTC17-202ENST00000299240 LINC01558Q9Y6Z2 57 aa6.35□□□□□ -1.39
TTC17-202ENST00000299240 LINC01554Q52M75 96 aa6.34□□□□□ -1.39
TTC17-202ENST00000299240 HMCN2Q8NDA2 5059 aa6.32□□□□□ -1.4
TTC17-202ENST00000299240 H1FX-AS1Q4G0G2 97 aa6.29□□□□□ -1.4
TTC17-202ENST00000299240 SVIPQ8NHG7 77 aa6.29□□□□□ -1.4
TTC17-202ENST00000299240 M0R2T5 61 aa6.28□□□□□ -1.4
TTC17-202ENST00000299240 ADM2Q7Z4H4 148 aa6.26□□□□□ -1.41
TTC17-202ENST00000299240 PMAIP1Q13794 54 aa6.25□□□□□ -1.41
TTC17-202ENST00000299240 P0C880 135 aa6.24□□□□□ -1.41
TTC17-202ENST00000299240 MIR22HGQ0VDD5 57 aa6.24□□□□□ -1.41
TTC17-202ENST00000299240 CSAG1Q6PB30 78 aa6.24□□□□□ -1.41
TTC17-202ENST00000299240 UQCR11O14957 56 aa6.23□□□□□ -1.41
TTC17-202ENST00000299240 A0A1B0GU33 70 aa6.23□□□□□ -1.41
TTC17-202ENST00000299240 KRTAP3-3Q9BYR6 98 aa6.21□□□□□ -1.42
TTC17-202ENST00000299240 PRO0628Q9UI54 55 aa6.2□□□□□ -1.42
TTC17-202ENST00000299240 SPINT4Q6UDR6 99 aa6.14□□□□□ -1.43
TTC17-202ENST00000299240 CDC42SE1Q9NRR8 79 aa6.12□□□□□ -1.43
TTC17-202ENST00000299240 CRIPTQ9P021 101 aa6.1□□□□□ -1.43
TTC17-202ENST00000299240 H0YAA0 97 aa6.1□□□□□ -1.43
TTC17-202ENST00000299240 MUC17Q685J3 4493 aa6.09□□□□□ -1.43
TTC17-202ENST00000299240 M0QZ58 72 aa6.08□□□□□ -1.44
TTC17-202ENST00000299240 KRTAP13-4Q3LI77 160 aa6.07□□□□□ -1.44
TTC17-202ENST00000299240 R4GN34 69 aa6.06□□□□□ -1.44
TTC17-202ENST00000299240 KRTAP10-6P60371 365 aaPredicted RBP6.05□□□□□ -1.44
TTC17-202ENST00000299240 LORP23490 312 aaPredicted RBP6.04□□□□□ -1.44
TTC17-202ENST00000299240 KRTAP3-2Q9BYR7 98 aa6.01□□□□□ -1.45
TTC17-202ENST00000299240 PRAC1Q96KF2 57 aa6□□□□□ -1.45
TTC17-202ENST00000299240 FSIP2Q5CZC0 6907 aa5.99□□□□□ -1.45
TTC17-202ENST00000299240 K7ERS5 55 aa5.95□□□□□ -1.46
TTC17-202ENST00000299240 KRTAP10-10P60014 251 aa5.87□□□□□ -1.47
TTC17-202ENST00000299240 KRTAP19-2Q3LHN2 52 aa5.87□□□□□ -1.47
TTC17-202ENST00000299240 FLGP20930 4061 aaPredicted RBP5.86□□□□□ -1.47
TTC17-202ENST00000299240 KRTAP12-2P59991 146 aa5.86□□□□□ -1.47
TTC17-202ENST00000299240 A6NN06 94 aa5.84□□□□□ -1.48
TTC17-202ENST00000299240 LCE2CQ5TA81 110 aa5.82□□□□□ -1.48
TTC17-202ENST00000299240 CAMK2N1Q7Z7J9 78 aa5.81□□□□□ -1.48
TTC17-202ENST00000299240 MT1HP80294 61 aa5.81□□□□□ -1.48
TTC17-202ENST00000299240 USH2AO75445 5202 aa5.79□□□□□ -1.48
TTC17-202ENST00000299240 KTN1-AS1Q86SY8 53 aa5.74□□□□□ -1.49
TTC17-202ENST00000299240 C10orf95Q9H7T3 257 aa5.74□□□□□ -1.49
TTC17-202ENST00000299240 KRTAP12-1P59990 96 aa5.74□□□□□ -1.49
TTC17-202ENST00000299240 MT1FP04733 61 aa5.65□□□□□ -1.5
TTC17-202ENST00000299240 ROMO1P60602 79 aa5.63□□□□□ -1.51
TTC17-202ENST00000299240 MT2AP02795 61 aa5.62□□□□□ -1.51
TTC17-202ENST00000299240 PLAC4Q8WY50 150 aa5.57□□□□□ -1.52
TTC17-202ENST00000299240 KRTAP9-8Q9BYQ0 159 aa5.54□□□□□ -1.52
TTC17-202ENST00000299240 KRTAP19-1Q8IUB9 90 aa5.49□□□□□ -1.53
TTC17-202ENST00000299240 KRTAP25-1Q3LHN0 102 aa5.43□□□□□ -1.54
TTC17-202ENST00000299240 KMT2DO14686 5537 aa5.4□□□□□ -1.54
TTC17-202ENST00000299240 SPRR2GQ9BYE4 73 aa5.34□□□□□ -1.55
TTC17-202ENST00000299240 LCE2AQ5TA79 106 aaPredicted RBP5.3□□□□□ -1.56
TTC17-202ENST00000299240 TNP1P09430 55 aa5.3□□□□□ -1.56
TTC17-202ENST00000299240 KRTAP9-3Q9BYQ3 159 aa5.3□□□□□ -1.56
TTC17-202ENST00000299240 LCE2BO14633 110 aa5.29□□□□□ -1.56
TTC17-202ENST00000299240 MT1BP07438 61 aa5.25□□□□□ -1.57
TTC17-202ENST00000299240 SSPOA2VEC9 5147 aa5.17□□□□□ -1.58
TTC17-202ENST00000299240 MT1XP80297 61 aa5.13□□□□□ -1.59
TTC17-202ENST00000299240 KRTAP10-5P60370 271 aa5.11□□□□□ -1.59
TTC17-202ENST00000299240 KRTAP10-7P60409 375 aaPredicted RBP5.11□□□□□ -1.59
TTC17-202ENST00000299240 KRTAP19-8Q3LI54 63 aa5.11□□□□□ -1.59
TTC17-202ENST00000299240 LCE3AQ5TA76 89 aa5.11□□□□□ -1.59
TTC17-202ENST00000299240 PRO2289Q9P1D8 64 aa5.08□□□□□ -1.6
TTC17-202ENST00000299240 KRTAP4-8A0A0G2JLE6 195 aa5.06□□□□□ -1.6
TTC17-202ENST00000299240 KRTAP4-8Q9BYQ9 185 aa5.06□□□□□ -1.6
TTC17-202ENST00000299240 KRTAP10-12P60413 245 aa5.02□□□□□ -1.61
TTC17-202ENST00000299240 DSTQ03001 7570 aaKnown RBP4.96□□□□□ -1.61
TTC17-202ENST00000299240 MUC12Q9UKN1 5478 aa4.94□□□□□ -1.62
TTC17-202ENST00000299240 FCGBPQ9Y6R7 5405 aaPredicted RBP4.93□□□□□ -1.62
TTC17-202ENST00000299240 SYNE2Q8WXH0 6885 aaKnown RBP4.91□□□□□ -1.62
TTC17-202ENST00000299240 PP632Q6XCG6 107 aa4.91□□□□□ -1.62
TTC17-202ENST00000299240 MACF1Q9UPN3 7388 aaKnown RBP4.87□□□□□ -1.63
TTC17-202ENST00000299240 NDUFAF8A1L188 74 aa4.86□□□□□ -1.63
TTC17-202ENST00000299240 KRTAP12-3P60328 96 aa4.85□□□□□ -1.63
TTC17-202ENST00000299240 KRTAP19-5Q3LI72 72 aa4.82□□□□□ -1.64
TTC17-202ENST00000299240 KRTAP9-2Q9BYQ4 174 aa4.8□□□□□ -1.64
TTC17-202ENST00000299240 KRTAP15-1Q3LI76 137 aa4.74□□□□□ -1.65
TTC17-202ENST00000299240 LUZP6Q538Z0 58 aa4.74□□□□□ -1.65
TTC17-202ENST00000299240 KRTAP8-1Q8IUC2 63 aa4.72□□□□□ -1.65
TTC17-202ENST00000299240 KRTAP4-7Q9BYR0 210 aa4.71□□□□□ -1.66
TTC17-202ENST00000299240 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
TTC17-202ENST00000299240 KRTAP19-6Q3LI70 58 aa4.65□□□□□ -1.66
TTC17-202ENST00000299240 MDN1Q9NU22 5596 aa4.64□□□□□ -1.67
TTC17-202ENST00000299240 CRCT1Q9UGL9 99 aa4.64□□□□□ -1.67
TTC17-202ENST00000299240 SPRR2FQ96RM1 72 aa4.63□□□□□ -1.67
TTC17-202ENST00000299240 SYNE1Q8NF91 8797 aaKnown RBP4.61□□□□□ -1.67
TTC17-202ENST00000299240 LCE2DQ5TA82 110 aaPredicted RBP4.58□□□□□ -1.68
TTC17-202ENST00000299240 KRTAP23-1A1A580 65 aa4.56□□□□□ -1.68
TTC17-202ENST00000299240 KRTAP19-7Q3SYF9 63 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms