RNA–Protein interactions for RNA: ENST00000298552.7

TSC1-201, Transcript of TSC complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC1, Length 8,604 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-201ENST00000298552 DNAH7Q8WXX0 4024 aa3.24□□□□□ -1.89
TSC1-201ENST00000298552 CMYA5Q8N3K9 4069 aa3.15□□□□□ -1.9
TSC1-201ENST00000298552 KRTAP3-1Q9BYR8 98 aa3.11□□□□□ -1.91
TSC1-201ENST00000298552 LCE3AQ5TA76 89 aa3.11□□□□□ -1.91
TSC1-201ENST00000298552 KRTAP10-4P60372 401 aaPredicted RBP3.09□□□□□ -1.91
TSC1-201ENST00000298552 ALMS1Q8TCU4 4167 aa3.08□□□□□ -1.92
TSC1-201ENST00000298552 ANK3Q12955 4377 aaKnown RBP3.07□□□□□ -1.92
TSC1-201ENST00000298552 DNAH3Q8TD57 4116 aa3.05□□□□□ -1.92
TSC1-201ENST00000298552 CSMD3Q7Z407 3707 aa3.03□□□□□ -1.92
TSC1-201ENST00000298552 LORP23490 312 aaPredicted RBP3.02□□□□□ -1.93
TSC1-201ENST00000298552 MT1HL1P0DM35 61 aa3.02□□□□□ -1.93
TSC1-201ENST00000298552 KRTAP3-2Q9BYR7 98 aa3□□□□□ -1.93
TSC1-201ENST00000298552 KRTAP12-4P60329 112 aa2.97□□□□□ -1.93
TSC1-201ENST00000298552 HUWE1Q7Z6Z7 4374 aaKnown RBP2.95□□□□□ -1.94
TSC1-201ENST00000298552 KRTAP3-3Q9BYR6 98 aa2.92□□□□□ -1.94
TSC1-201ENST00000298552 SPRR2FQ96RM1 72 aa2.91□□□□□ -1.94
TSC1-201ENST00000298552 KMT2AQ03164 3969 aa2.9□□□□□ -1.95
TSC1-201ENST00000298552 LCE3CQ5T5A8 94 aa2.89□□□□□ -1.95
TSC1-201ENST00000298552 DNAH6Q9C0G6 4158 aa2.88□□□□□ -1.95
TSC1-201ENST00000298552 KRTAP4-5Q9BYR2 181 aa2.87□□□□□ -1.95
TSC1-201ENST00000298552 DNAH1Q9P2D7 4330 aa2.86□□□□□ -1.95
TSC1-201ENST00000298552 VPS13BQ7Z7G8 4022 aa2.86□□□□□ -1.95
TSC1-201ENST00000298552 FRAS1Q86XX4 4008 aa2.8□□□□□ -1.96
TSC1-201ENST00000298552 PRKDCP78527 4128 aaKnown RBP2.8□□□□□ -1.96
TSC1-201ENST00000298552 SPRR2GQ9BYE4 73 aa2.78□□□□□ -1.97
TSC1-201ENST00000298552 SPRR2EP22531 72 aa2.77□□□□□ -1.97
TSC1-201ENST00000298552 SPRR2BP35325 72 aa2.77□□□□□ -1.97
TSC1-201ENST00000298552 SPRR2AP35326 72 aa2.77□□□□□ -1.97
TSC1-201ENST00000298552 FLGP20930 4061 aaPredicted RBP2.77□□□□□ -1.97
TSC1-201ENST00000298552 LCE2BO14633 110 aa2.76□□□□□ -1.97
TSC1-201ENST00000298552 DNAH2Q9P225 4427 aa2.75□□□□□ -1.97
TSC1-201ENST00000298552 DNAH9Q9NYC9 4486 aa2.74□□□□□ -1.97
TSC1-201ENST00000298552 SPRR2DP22532 72 aa2.74□□□□□ -1.97
TSC1-201ENST00000298552 KRTAP19-5Q3LI72 72 aa2.73□□□□□ -1.97
TSC1-201ENST00000298552 LCE3DQ9BYE3 92 aa2.72□□□□□ -1.97
TSC1-201ENST00000298552 LCE3BQ5TA77 95 aa2.69□□□□□ -1.98
TSC1-201ENST00000298552 LCE3EQ5T5B0 92 aa2.69□□□□□ -1.98
TSC1-201ENST00000298552 PKHD1P08F94 4074 aa2.67□□□□□ -1.98
TSC1-201ENST00000298552 FAT2Q9NYQ8 4349 aa2.65□□□□□ -1.98
TSC1-201ENST00000298552 MT1HP80294 61 aa2.64□□□□□ -1.99
TSC1-201ENST00000298552 LCE2CQ5TA81 110 aa2.63□□□□□ -1.99
TSC1-201ENST00000298552 DYNC2H1Q8NCM8 4307 aaKnown RBP2.63□□□□□ -1.99
TSC1-201ENST00000298552 KRTAP4-1Q9BYQ7 146 aa2.61□□□□□ -1.99
TSC1-201ENST00000298552 MT1GP13640 62 aa2.59□□□□□ -1.99
TSC1-201ENST00000298552 DNAH10Q8IVF4 4471 aa2.59□□□□□ -2
TSC1-201ENST00000298552 MT2AP02795 61 aa2.58□□□□□ -2
TSC1-201ENST00000298552 VPS13DQ5THJ4 4388 aa2.57□□□□□ -2
TSC1-201ENST00000298552 DNAH11Q96DT5 4516 aa2.54□□□□□ -2
TSC1-201ENST00000298552 PLECQ15149 4684 aaKnown RBP2.54□□□□□ -2
TSC1-201ENST00000298552 DNAH5Q8TE73 4624 aa2.53□□□□□ -2
TSC1-201ENST00000298552 LCE2DQ5TA82 110 aaPredicted RBP2.53□□□□□ -2
TSC1-201ENST00000298552 DNAH17Q9UFH2 4485 aa2.53□□□□□ -2.01
TSC1-201ENST00000298552 MT1FP04733 61 aa2.52□□□□□ -2.01
TSC1-201ENST00000298552 STARD9Q9P2P6 4700 aa2.51□□□□□ -2.01
TSC1-201ENST00000298552 DNAH8Q96JB1 4490 aa2.49□□□□□ -2.01
TSC1-201ENST00000298552 LRP1BQ9NZR2 4599 aa2.48□□□□□ -2.01
TSC1-201ENST00000298552 SPRR5A0A1B0GTR4 108 aa2.45□□□□□ -2.02
TSC1-201ENST00000298552 MT1LQ93083 61 aa2.43□□□□□ -2.02
TSC1-201ENST00000298552 KRTAP19-8Q3LI54 63 aa2.43□□□□□ -2.02
TSC1-201ENST00000298552 PKHD1L1Q86WI1 4243 aa2.41□□□□□ -2.02
TSC1-201ENST00000298552 FAT1Q14517 4588 aa2.38□□□□□ -2.03
TSC1-201ENST00000298552 KRTAP19-1Q8IUB9 90 aa2.37□□□□□ -2.03
TSC1-201ENST00000298552 PRM1P04553 51 aa2.36□□□□□ -2.03
TSC1-201ENST00000298552 KRTAP19-3Q7Z4W3 81 aa2.36□□□□□ -2.03
TSC1-201ENST00000298552 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
TSC1-201ENST00000298552 SACSQ9NZJ4 4579 aa2.35□□□□□ -2.03
TSC1-201ENST00000298552 LCE1DQ5T752 114 aa2.34□□□□□ -2.03
TSC1-201ENST00000298552 MT1XP80297 61 aa2.33□□□□□ -2.04
TSC1-201ENST00000298552 PKD1P98161 4303 aa2.32□□□□□ -2.04
TSC1-201ENST00000298552 DYNC1H1Q14204 4646 aaKnown RBP2.31□□□□□ -2.04
TSC1-201ENST00000298552 LRP1Q07954 4544 aaKnown RBP2.31□□□□□ -2.04
TSC1-201ENST00000298552 KRTAP9-8Q9BYQ0 159 aa2.3□□□□□ -2.04
TSC1-201ENST00000298552 APOBP04114 4563 aaKnown RBP2.3□□□□□ -2.04
TSC1-201ENST00000298552 FAT3Q8TDW7 4589 aa2.29□□□□□ -2.04
TSC1-201ENST00000298552 MT1EP04732 61 aa2.28□□□□□ -2.04
TSC1-201ENST00000298552 MT4P47944 62 aa2.28□□□□□ -2.05
TSC1-201ENST00000298552 LCE5AQ5TCM9 118 aa2.28□□□□□ -2.05
TSC1-201ENST00000298552 MT1BP07438 61 aa2.27□□□□□ -2.05
TSC1-201ENST00000298552 DNHD1Q96M86 4753 aa2.27□□□□□ -2.05
TSC1-201ENST00000298552 RYR1P21817 5038 aa2.26□□□□□ -2.05
TSC1-201ENST00000298552 HSPG2P98160 4391 aa2.26□□□□□ -2.05
TSC1-201ENST00000298552 TNXBP22105 4242 aa2.25□□□□□ -2.05
TSC1-201ENST00000298552 MYCBP2O75592 4640 aa2.25□□□□□ -2.05
TSC1-201ENST00000298552 KRTAP9-3Q9BYQ3 159 aa2.24□□□□□ -2.05
TSC1-201ENST00000298552 KRTAP17-1Q9BYP8 105 aa2.24□□□□□ -2.05
TSC1-201ENST00000298552 MT1MQ8N339 61 aa2.24□□□□□ -2.05
TSC1-201ENST00000298552 LCE1CQ5T751 118 aa2.23□□□□□ -2.05
TSC1-201ENST00000298552 LCE1EQ5T753 118 aa2.23□□□□□ -2.05
TSC1-201ENST00000298552 LCE1FQ5T754 118 aa2.23□□□□□ -2.05
TSC1-201ENST00000298552 LCE1AQ5T7P2 110 aa2.23□□□□□ -2.05
TSC1-201ENST00000298552 KRTAP4-8A0A0G2JLE6 195 aa2.21□□□□□ -2.06
TSC1-201ENST00000298552 KRTAP4-8Q9BYQ9 185 aa2.21□□□□□ -2.06
TSC1-201ENST00000298552 KRTAP20-1Q3LI63 56 aa2.17□□□□□ -2.06
TSC1-201ENST00000298552 MT1AP04731 61 aa2.16□□□□□ -2.06
TSC1-201ENST00000298552 LPAP08519 4548 aa2.14□□□□□ -2.07
TSC1-201ENST00000298552 LCE4AQ5TA78 99 aa2.13□□□□□ -2.07
TSC1-201ENST00000298552 RYR2Q92736 4967 aa2.12□□□□□ -2.07
TSC1-201ENST00000298552 LRP2P98164 4655 aa2.11□□□□□ -2.07
TSC1-201ENST00000298552 RYR3Q15413 4870 aa2.08□□□□□ -2.08
TSC1-201ENST00000298552 KRTAP19-6Q3LI70 58 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 1902.8 ms