RNA–Protein interactions for RNA: ENST00000298552.7

TSC1-201, Transcript of TSC complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC1, Length 8,604 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-201ENST00000298552 PELP1Q8IZL8 1130 aaKnown RBP12.75□□□□□ -0.37
TSC1-201ENST00000298552 MYT1Q01538 1121 aa12.13□□□□□ -0.47
TSC1-201ENST00000298552 CCER1Q8TC90 406 aaPredicted RBP12.11□□□□□ -0.47
TSC1-201ENST00000298552 YTHDC1Q96MU7 727 aaKnown RBP12.03□□□□□ -0.48
TSC1-201ENST00000298552 FAM9AQ8IZU1 332 aaPredicted RBP11.89□□□□□ -0.51
TSC1-201ENST00000298552 ERICH6Q7L0X2 663 aa11.87□□□□□ -0.51
TSC1-201ENST00000298552 TTBK1Q5TCY1 1321 aaPredicted RBP11.66□□□□□ -0.54
TSC1-201ENST00000298552 APLP2Q06481 763 aa11.46□□□□□ -0.57
TSC1-201ENST00000298552 DCAF8L2P0C7V8 631 aa11.42□□□□□ -0.58
TSC1-201ENST00000298552 DAXXQ9UER7 740 aaPredicted RBP11.4□□□□□ -0.58
TSC1-201ENST00000298552 CENPBP07199 599 aaPredicted RBP11.32□□□□□ -0.6
TSC1-201ENST00000298552 NEFLP07196 543 aa11.32□□□□□ -0.6
TSC1-201ENST00000298552 CLSPNQ9HAW4 1339 aa11.09□□□□□ -0.63
TSC1-201ENST00000298552 RANGAP1P46060 587 aaPredicted RBP11.07□□□□□ -0.64
TSC1-201ENST00000298552 ZEB1P37275 1124 aaPredicted RBP11□□□□□ -0.65
TSC1-201ENST00000298552 ZNF316A6NFI3 1004 aaPredicted RBP10.96□□□□□ -0.65
TSC1-201ENST00000298552 RTL5Q5HYW3 569 aaPredicted RBP10.94□□□□□ -0.66
TSC1-201ENST00000298552 GLIPR1L2Q4G1C9 344 aa10.93□□□□□ -0.66
TSC1-201ENST00000298552 NISCHQ9Y2I1 1504 aa10.88□□□□□ -0.67
TSC1-201ENST00000298552 NEFMP07197 916 aa10.87□□□□□ -0.67
TSC1-201ENST00000298552 ZBTB47Q9UFB7 747 aaPredicted RBP10.78□□□□□ -0.68
TSC1-201ENST00000298552 MYT1LQ9UL68 1186 aa10.71□□□□□ -0.69
TSC1-201ENST00000298552 CDK11BP21127 795 aaKnown RBP10.7□□□□□ -0.7
TSC1-201ENST00000298552 ANP32BQ92688 251 aaKnown RBP10.7□□□□□ -0.7
TSC1-201ENST00000298552 CDK11AQ9UQ88 783 aaPredicted RBP10.7□□□□□ -0.7
TSC1-201ENST00000298552 SUPT5HO00267 1087 aaKnown RBP10.68□□□□□ -0.7
TSC1-201ENST00000298552 POLR3GLQ9BT43 218 aa10.67□□□□□ -0.7
TSC1-201ENST00000298552 SHROOM4Q9ULL8 1493 aa10.49□□□□□ -0.73
TSC1-201ENST00000298552 ATP1B4Q9UN42 357 aaPredicted RBP10.49□□□□□ -0.73
TSC1-201ENST00000298552 TRIM26Q12899 539 aaPredicted RBP10.45□□□□□ -0.74
TSC1-201ENST00000298552 PCGF6Q9BYE7 350 aa10.45□□□□□ -0.74
TSC1-201ENST00000298552 TNNT2P45379 298 aaPredicted RBP10.44□□□□□ -0.74
TSC1-201ENST00000298552 SLC4A1APQ9BWU0 796 aaKnown RBP10.42□□□□□ -0.74
TSC1-201ENST00000298552 EHMT2Q96KQ7 1210 aa10.35□□□□□ -0.75
TSC1-201ENST00000298552 TRIM44Q96DX7 344 aaPredicted RBP10.32□□□□□ -0.76
TSC1-201ENST00000298552 HSP90AA1P07900 732 aaKnown RBP10.3□□□□□ -0.76
TSC1-201ENST00000298552 UPF2Q9HAU5 1272 aaKnown RBP10.3□□□□□ -0.76
TSC1-201ENST00000298552 CANXP27824 592 aaKnown RBP10.28□□□□□ -0.76
TSC1-201ENST00000298552 NCLP19338 710 aaKnown RBP10.27□□□□□ -0.77
TSC1-201ENST00000298552 ANP32AP39687 249 aaKnown RBP10.25□□□□□ -0.77
TSC1-201ENST00000298552 EIF5BO60841 1220 aaKnown RBP10.24□□□□□ -0.77
TSC1-201ENST00000298552 CALRP27797 417 aaKnown RBP10.24□□□□□ -0.77
TSC1-201ENST00000298552 UBTFP17480 764 aaKnown RBP10.23□□□□□ -0.77
TSC1-201ENST00000298552 L1TD1Q5T7N2 865 aaKnown RBP10.23□□□□□ -0.77
TSC1-201ENST00000298552 ANP32EQ9BTT0 268 aa10.22□□□□□ -0.77
TSC1-201ENST00000298552 SLC24A1O60721 1099 aa10.21□□□□□ -0.78
TSC1-201ENST00000298552 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.16□□□□□ -0.78
TSC1-201ENST00000298552 HNRNPUL2Q1KMD3 747 aaKnown RBP10.16□□□□□ -0.78
TSC1-201ENST00000298552 ZNF326Q5BKZ1 582 aaKnown RBP10.15□□□□□ -0.79
TSC1-201ENST00000298552 ZRSR1Q15695 479 aaKnown RBP10.14□□□□□ -0.79
TSC1-201ENST00000298552 GOLGA6L6A8MZA4 724 aa10.12□□□□□ -0.79
TSC1-201ENST00000298552 NRDCO43847 1150 aa10.11□□□□□ -0.79
TSC1-201ENST00000298552 USP35Q9P2H5 1018 aa10.11□□□□□ -0.79
TSC1-201ENST00000298552 TRIM41Q8WV44 630 aa10.08□□□□□ -0.8
TSC1-201ENST00000298552 PTMSP20962 102 aa10.07□□□□□ -0.8
TSC1-201ENST00000298552 NPM2Q86SE8 214 aaKnown RBP10.07□□□□□ -0.8
TSC1-201ENST00000298552 CHIC1Q5VXU3 224 aa10.04□□□□□ -0.8
TSC1-201ENST00000298552 GOLGA6L22H0YM25 854 aa10.02□□□□□ -0.81
TSC1-201ENST00000298552 MYH16Q9H6N6 1097 aa9.99□□□□□ -0.81
TSC1-201ENST00000298552 NEUROD1Q13562 356 aa9.99□□□□□ -0.81
TSC1-201ENST00000298552 BCANQ96GW7 911 aa9.97□□□□□ -0.81
TSC1-201ENST00000298552 CHAF1AQ13111 956 aaPredicted RBP9.97□□□□□ -0.81
TSC1-201ENST00000298552 ANP32CO43423 234 aa9.97□□□□□ -0.81
TSC1-201ENST00000298552 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.97□□□□□ -0.81
TSC1-201ENST00000298552 CNGB1Q14028 1251 aaPredicted RBP9.96□□□□□ -0.82
TSC1-201ENST00000298552 KRI1Q8N9T8 703 aaKnown RBP9.96□□□□□ -0.82
TSC1-201ENST00000298552 ESF1Q9H501 851 aaKnown RBP9.96□□□□□ -0.82
TSC1-201ENST00000298552 KIAA2012Q0VF49 1180 aa9.96□□□□□ -0.82
TSC1-201ENST00000298552 BECN1Q14457 450 aa9.91□□□□□ -0.82
TSC1-201ENST00000298552 ERICH6BQ5W0A0 696 aa9.91□□□□□ -0.82
TSC1-201ENST00000298552 CASC1Q6TDU7 716 aa9.9□□□□□ -0.83
TSC1-201ENST00000298552 PRM3Q9NNZ6 103 aa9.88□□□□□ -0.83
TSC1-201ENST00000298552 STK11IPQ8N1F8 1099 aa9.87□□□□□ -0.83
TSC1-201ENST00000298552 PTMAP06454 111 aaKnown RBP9.86□□□□□ -0.83
TSC1-201ENST00000298552 DNTTIP2Q5QJE6 756 aaKnown RBP9.86□□□□□ -0.83
TSC1-201ENST00000298552 NOC3LQ8WTT2 800 aaKnown RBP9.85□□□□□ -0.83
TSC1-201ENST00000298552 BCL11AQ9H165 835 aa9.84□□□□□ -0.83
TSC1-201ENST00000298552 DIEXFQ68CQ4 756 aaKnown RBP9.84□□□□□ -0.83
TSC1-201ENST00000298552 SETQ01105 290 aaPredicted RBP9.83□□□□□ -0.84
TSC1-201ENST00000298552 DDRGK1Q96HY6 314 aa9.83□□□□□ -0.84
TSC1-201ENST00000298552 PNNQ9H307 717 aaKnown RBP9.83□□□□□ -0.84
TSC1-201ENST00000298552 GOLGA6L1Q8N7Z2 621 aa9.83□□□□□ -0.84
TSC1-201ENST00000298552 GOLGA6L4A6NEF3 574 aa9.82□□□□□ -0.84
TSC1-201ENST00000298552 EIF4G2P78344 907 aaKnown RBP eCLIP9.8□□□□□ -0.84
TSC1-201ENST00000298552 ITGAEP38570 1179 aa9.79□□□□□ -0.84
TSC1-201ENST00000298552 ANO8Q9HCE9 1232 aaPredicted RBP9.79□□□□□ -0.84
TSC1-201ENST00000298552 ARID4BQ4LE39 1312 aaPredicted RBP9.79□□□□□ -0.84
TSC1-201ENST00000298552 CCDC34Q96HJ3 373 aa9.78□□□□□ -0.84
TSC1-201ENST00000298552 TRIM52Q96A61 297 aa9.77□□□□□ -0.84
TSC1-201ENST00000298552 GON4LQ3T8J9 2241 aa9.77□□□□□ -0.85
TSC1-201ENST00000298552 CHMP4BQ9H444 224 aaKnown RBP9.77□□□□□ -0.85
TSC1-201ENST00000298552 CFAP44Q96MT7 982 aa9.76□□□□□ -0.85
TSC1-201ENST00000298552 CLSTN1O94985 981 aa9.76□□□□□ -0.85
TSC1-201ENST00000298552 GOLGA2Q08379 1002 aa9.76□□□□□ -0.85
TSC1-201ENST00000298552 TNNT3P45378 269 aaPredicted RBP9.76□□□□□ -0.85
TSC1-201ENST00000298552 A0A0U1RQG5 324 aaPredicted RBP9.74□□□□□ -0.85
TSC1-201ENST00000298552 STAG3Q9UJ98 1225 aa9.73□□□□□ -0.85
TSC1-201ENST00000298552 HRCP23327 699 aa9.73□□□□□ -0.85
TSC1-201ENST00000298552 NCBP3Q53F19 620 aaKnown RBP9.72□□□□□ -0.85
TSC1-201ENST00000298552 CEP89Q96ST8 783 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms