RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 OCR1Q9BZK8 76 aa2.94□□□□□ -1.94
SSX3-201ENST00000298396 TP53AIP1Q9HCN2 124 aa2.94□□□□□ -1.94
SSX3-201ENST00000298396 C7orf65Q6ZTY9 151 aa2.93□□□□□ -1.94
SSX3-201ENST00000298396 TRAV22A0A0B4J277 110 aa2.92□□□□□ -1.94
SSX3-201ENST00000298396 COX6B2Q6YFQ2 88 aa2.92□□□□□ -1.94
SSX3-201ENST00000298396 IMUPQ9GZP8 106 aa2.92□□□□□ -1.94
SSX3-201ENST00000298396 UQCRQO14949 82 aa2.91□□□□□ -1.94
SSX3-201ENST00000298396 FAM236AA0A1B0GUQ0 79 aa2.9□□□□□ -1.95
SSX3-201ENST00000298396 FAM236BA0A1B0GV22 79 aa2.9□□□□□ -1.95
SSX3-201ENST00000298396 H0Y9P7 68 aa2.9□□□□□ -1.95
SSX3-201ENST00000298396 CYP4F30PQ9H0H9 118 aa2.9□□□□□ -1.95
SSX3-201ENST00000298396 RBM12B-AS1Q9P1G2 102 aa2.9□□□□□ -1.95
SSX3-201ENST00000298396 FAM236DA0A1B0GTK5 79 aa2.89□□□□□ -1.95
SSX3-201ENST00000298396 FAM236CP0DP71 79 aa2.89□□□□□ -1.95
SSX3-201ENST00000298396 C4orf26Q17RF5 130 aa2.89□□□□□ -1.95
SSX3-201ENST00000298396 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
SSX3-201ENST00000298396 KLKP1Q107X0 134 aa2.88□□□□□ -1.95
SSX3-201ENST00000298396 LOC101927531A0A1B0GV80 90 aa2.87□□□□□ -1.95
SSX3-201ENST00000298396 C1orf64Q8NEQ6 169 aa2.87□□□□□ -1.95
SSX3-201ENST00000298396 ATOX1O00244 68 aa2.86□□□□□ -1.95
SSX3-201ENST00000298396 LINC00208Q96KT6 92 aa2.86□□□□□ -1.95
SSX3-201ENST00000298396 TRAV7A0A075B6U4 112 aa2.85□□□□□ -1.95
SSX3-201ENST00000298396 SCGB1A1P11684 91 aa2.85□□□□□ -1.95
SSX3-201ENST00000298396 H1FX-AS1Q4G0G2 97 aa2.85□□□□□ -1.95
SSX3-201ENST00000298396 C5orf47Q569G3 176 aa2.85□□□□□ -1.95
SSX3-201ENST00000298396 M0R2T5 61 aa2.84□□□□□ -1.95
SSX3-201ENST00000298396 LCE1EQ5T753 118 aa2.84□□□□□ -1.95
SSX3-201ENST00000298396 FSIP2Q5CZC0 6907 aa2.83□□□□□ -1.96
SSX3-201ENST00000298396 NDUFAF8A1L188 74 aa2.83□□□□□ -1.96
SSX3-201ENST00000298396 MP68P56378 58 aa2.83□□□□□ -1.96
SSX3-201ENST00000298396 H3BPC8 53 aa2.82□□□□□ -1.96
SSX3-201ENST00000298396 MT2AP02795 61 aa2.82□□□□□ -1.96
SSX3-201ENST00000298396 SMIM20Q8N5G0 67 aa2.82□□□□□ -1.96
SSX3-201ENST00000298396 MT1FP04733 61 aa2.81□□□□□ -1.96
SSX3-201ENST00000298396 LCA10Q71F78 164 aa2.8□□□□□ -1.96
SSX3-201ENST00000298396 SERP2Q8N6R1 65 aa2.8□□□□□ -1.96
SSX3-201ENST00000298396 SNURFQ9Y675 71 aa2.8□□□□□ -1.96
SSX3-201ENST00000298396 USH2AO75445 5202 aa2.79□□□□□ -1.96
SSX3-201ENST00000298396 KRTAP10-12P60413 245 aa2.79□□□□□ -1.96
SSX3-201ENST00000298396 S4R3F8 94 aa2.79□□□□□ -1.96
SSX3-201ENST00000298396 CYSTM1Q9H1C7 97 aa2.78□□□□□ -1.96
SSX3-201ENST00000298396 C20orf197Q8N268 126 aa2.77□□□□□ -1.97
SSX3-201ENST00000298396 DMAC1Q96GE9 116 aa2.77□□□□□ -1.97
SSX3-201ENST00000298396 COX7CP15954 63 aa2.76□□□□□ -1.97
SSX3-201ENST00000298396 A8MUN3 132 aa2.75□□□□□ -1.97
SSX3-201ENST00000298396 KRTAP10-10P60014 251 aa2.74□□□□□ -1.97
SSX3-201ENST00000298396 KRTAP10-5P60370 271 aa2.74□□□□□ -1.97
SSX3-201ENST00000298396 CSAG1Q6PB30 78 aa2.73□□□□□ -1.97
SSX3-201ENST00000298396 SSPOA2VEC9 5147 aa2.72□□□□□ -1.97
SSX3-201ENST00000298396 CCDC179H3BU77 68 aa2.72□□□□□ -1.97
SSX3-201ENST00000298396 ANAPC13Q9BS18 74 aa2.72□□□□□ -1.97
SSX3-201ENST00000298396 H7BZZ5 65 aa2.71□□□□□ -1.98
SSX3-201ENST00000298396 SPANXA2-OT1Q8N9U9 137 aa2.71□□□□□ -1.98
SSX3-201ENST00000298396 CRCT1Q9UGL9 99 aa2.71□□□□□ -1.98
SSX3-201ENST00000298396 NDUFC1O43677 76 aa2.69□□□□□ -1.98
SSX3-201ENST00000298396 ACYP2P14621 99 aa2.68□□□□□ -1.98
SSX3-201ENST00000298396 KRTAP5-1Q6L8H4 278 aa2.68□□□□□ -1.98
SSX3-201ENST00000298396 H0YAA0 97 aa2.67□□□□□ -1.98
SSX3-201ENST00000298396 P0C880 135 aa2.65□□□□□ -1.99
SSX3-201ENST00000298396 LCE3CQ5T5A8 94 aa2.65□□□□□ -1.99
SSX3-201ENST00000298396 ADM2Q7Z4H4 148 aa2.65□□□□□ -1.99
SSX3-201ENST00000298396 COA5Q86WW8 74 aa2.65□□□□□ -1.99
SSX3-201ENST00000298396 SPRR2GQ9BYE4 73 aa2.65□□□□□ -1.99
SSX3-201ENST00000298396 KRTAP5-9P26371 169 aa2.63□□□□□ -1.99
SSX3-201ENST00000298396 FCGBPQ9Y6R7 5405 aaPredicted RBP2.63□□□□□ -1.99
SSX3-201ENST00000298396 MT1BP07438 61 aa2.62□□□□□ -1.99
SSX3-201ENST00000298396 KRTAP19-8Q3LI54 63 aa2.62□□□□□ -1.99
SSX3-201ENST00000298396 KRTAP5-4Q6L8H1 288 aa2.62□□□□□ -1.99
SSX3-201ENST00000298396 CHKB-CPT1BH3BT56 60 aa2.61□□□□□ -1.99
SSX3-201ENST00000298396 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
SSX3-201ENST00000298396 CRIPTQ9P021 101 aa2.59□□□□□ -1.99
SSX3-201ENST00000298396 KRTAP19-6Q3LI70 58 aa2.58□□□□□ -2
SSX3-201ENST00000298396 SPTSSBQ8NFR3 76 aa2.58□□□□□ -2
SSX3-201ENST00000298396 ATP5EP56381 51 aaPredicted RBP2.57□□□□□ -2
SSX3-201ENST00000298396 TMEM258P61165 79 aa2.57□□□□□ -2
SSX3-201ENST00000298396 KRTAP13-4Q3LI77 160 aa2.56□□□□□ -2
SSX3-201ENST00000298396 Q5VV11 94 aa2.55□□□□□ -2
SSX3-201ENST00000298396 KRTAP9-6A8MVA2 160 aa2.54□□□□□ -2
SSX3-201ENST00000298396 M0QZ58 72 aa2.54□□□□□ -2
SSX3-201ENST00000298396 R4GN34 69 aa2.54□□□□□ -2
SSX3-201ENST00000298396 SYNE2Q8WXH0 6885 aaKnown RBP2.51□□□□□ -2.01
SSX3-201ENST00000298396 MT1XP80297 61 aa2.49□□□□□ -2.01
SSX3-201ENST00000298396 LINC01554Q52M75 96 aa2.49□□□□□ -2.01
SSX3-201ENST00000298396 SERP1Q9Y6X1 66 aa2.49□□□□□ -2.01
SSX3-201ENST00000298396 LINC01558Q9Y6Z2 57 aa2.48□□□□□ -2.01
SSX3-201ENST00000298396 MACF1Q9UPN3 7388 aaKnown RBP2.48□□□□□ -2.01
SSX3-201ENST00000298396 A8MU10 97 aa2.47□□□□□ -2.01
SSX3-201ENST00000298396 SPATA8Q6RVD6 105 aa2.47□□□□□ -2.01
SSX3-201ENST00000298396 A0A1B0GU33 70 aa2.46□□□□□ -2.02
SSX3-201ENST00000298396 A0A1B0GU69 56 aa2.46□□□□□ -2.02
SSX3-201ENST00000298396 A6NN06 94 aa2.46□□□□□ -2.02
SSX3-201ENST00000298396 SEC61GP60059 68 aa2.46□□□□□ -2.02
SSX3-201ENST00000298396 KMT2DO14686 5537 aa2.46□□□□□ -2.02
SSX3-201ENST00000298396 PLAC4Q8WY50 150 aa2.44□□□□□ -2.02
SSX3-201ENST00000298396 A0A0D9SG42 100 aa2.43□□□□□ -2.02
SSX3-201ENST00000298396 KRTAP12-1P59990 96 aa2.42□□□□□ -2.02
SSX3-201ENST00000298396 KRTAP12-2P59991 146 aa2.41□□□□□ -2.02
SSX3-201ENST00000298396 Q1T7F1 81 aa2.41□□□□□ -2.02
SSX3-201ENST00000298396 LCE3EQ5T5B0 92 aa2.41□□□□□ -2.02
SSX3-201ENST00000298396 PRR15LQ9BU68 103 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms