RNA–Protein interactions for RNA: ENST00000295925.5

CCNL1-201, Transcript of cyclin L1, humanhuman

TSL 1 (best) BASIC

Gene CCNL1, Length 549 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-201ENST00000295925 KRTAP9-3Q9BYQ3 159 aa7.69□□□□□ -1.18
CCNL1-201ENST00000295925 FSIP2Q5CZC0 6907 aa7.68□□□□□ -1.18
CCNL1-201ENST00000295925 CRCT1Q9UGL9 99 aa7.66□□□□□ -1.18
CCNL1-201ENST00000295925 A8MUN3 132 aa7.64□□□□□ -1.19
CCNL1-201ENST00000295925 LOC100996750A0A140TA64 210 aa7.58□□□□□ -1.2
CCNL1-201ENST00000295925 NDUFC1O43677 76 aa7.58□□□□□ -1.2
CCNL1-201ENST00000295925 KRTAP4-6Q9BYQ5 205 aa7.58□□□□□ -1.2
CCNL1-201ENST00000295925 SNURFQ9Y675 71 aa7.57□□□□□ -1.2
CCNL1-201ENST00000295925 DMAC1Q96GE9 116 aa7.55□□□□□ -1.2
CCNL1-201ENST00000295925 SERP2Q8N6R1 65 aa7.54□□□□□ -1.2
CCNL1-201ENST00000295925 USH2AO75445 5202 aa7.54□□□□□ -1.2
CCNL1-201ENST00000295925 C20orf197Q8N268 126 aa7.51□□□□□ -1.21
CCNL1-201ENST00000295925 KRTAP19-1Q8IUB9 90 aa7.42□□□□□ -1.22
CCNL1-201ENST00000295925 ACYP2P14621 99 aa7.41□□□□□ -1.22
CCNL1-201ENST00000295925 SSPOA2VEC9 5147 aa7.4□□□□□ -1.22
CCNL1-201ENST00000295925 ADM2Q7Z4H4 148 aa7.4□□□□□ -1.22
CCNL1-201ENST00000295925 H0YAA0 97 aa7.39□□□□□ -1.23
CCNL1-201ENST00000295925 COX7CP15954 63 aa7.38□□□□□ -1.23
CCNL1-201ENST00000295925 SPANXA2-OT1Q8N9U9 137 aa7.35□□□□□ -1.23
CCNL1-201ENST00000295925 SPRR2GQ9BYE4 73 aa7.35□□□□□ -1.23
CCNL1-201ENST00000295925 CHKB-CPT1BH3BT56 60 aa7.33□□□□□ -1.24
CCNL1-201ENST00000295925 CRIPTQ9P021 101 aa7.31□□□□□ -1.24
CCNL1-201ENST00000295925 ANAPC13Q9BS18 74 aa7.3□□□□□ -1.24
CCNL1-201ENST00000295925 KRTAP19-8Q3LI54 63 aa7.27□□□□□ -1.25
CCNL1-201ENST00000295925 KRTAP19-6Q3LI70 58 aa7.27□□□□□ -1.25
CCNL1-201ENST00000295925 Q5VV11 94 aa7.27□□□□□ -1.25
CCNL1-201ENST00000295925 CYSTM1Q9H1C7 97 aa7.27□□□□□ -1.25
CCNL1-201ENST00000295925 MT1BP07438 61 aa7.26□□□□□ -1.25
CCNL1-201ENST00000295925 P0C880 135 aa7.26□□□□□ -1.25
CCNL1-201ENST00000295925 SPTSSBQ8NFR3 76 aa7.26□□□□□ -1.25
CCNL1-201ENST00000295925 FCGBPQ9Y6R7 5405 aaPredicted RBP7.21□□□□□ -1.26
CCNL1-201ENST00000295925 H7BZZ5 65 aa7.21□□□□□ -1.26
CCNL1-201ENST00000295925 COA5Q86WW8 74 aa7.18□□□□□ -1.26
CCNL1-201ENST00000295925 R4GN34 69 aa7.17□□□□□ -1.26
CCNL1-201ENST00000295925 CCDC179H3BU77 68 aa7.16□□□□□ -1.26
CCNL1-201ENST00000295925 M0QZ58 72 aa7.15□□□□□ -1.26
CCNL1-201ENST00000295925 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.13□□□□□ -1.27
CCNL1-201ENST00000295925 A6NN06 94 aa7.08□□□□□ -1.28
CCNL1-201ENST00000295925 LINC01554Q52M75 96 aa7.06□□□□□ -1.28
CCNL1-201ENST00000295925 KRTAP10-5P60370 271 aa7.02□□□□□ -1.29
CCNL1-201ENST00000295925 PLAC4Q8WY50 150 aa6.99□□□□□ -1.29
CCNL1-201ENST00000295925 KRTAP9-7A8MTY7 169 aa6.96□□□□□ -1.3
CCNL1-201ENST00000295925 ATP5EP56381 51 aaPredicted RBP6.93□□□□□ -1.3
CCNL1-201ENST00000295925 SEC61GP60059 68 aa6.93□□□□□ -1.3
CCNL1-201ENST00000295925 KRTAP4-8Q9BYQ9 185 aa6.93□□□□□ -1.3
CCNL1-201ENST00000295925 MACF1Q9UPN3 7388 aaKnown RBP6.93□□□□□ -1.3
CCNL1-201ENST00000295925 SERP1Q9Y6X1 66 aa6.91□□□□□ -1.3
CCNL1-201ENST00000295925 KRTAP13-4Q3LI77 160 aa6.9□□□□□ -1.3
CCNL1-201ENST00000295925 MT1XP80297 61 aa6.88□□□□□ -1.31
CCNL1-201ENST00000295925 SYNE2Q8WXH0 6885 aaKnown RBP6.86□□□□□ -1.31
CCNL1-201ENST00000295925 TMEM258P61165 79 aa6.86□□□□□ -1.31
CCNL1-201ENST00000295925 PRO2289Q9P1D8 64 aa6.86□□□□□ -1.31
CCNL1-201ENST00000295925 A0A1B0GU69 56 aa6.8□□□□□ -1.32
CCNL1-201ENST00000295925 A0A1B0GU33 70 aa6.79□□□□□ -1.32
CCNL1-201ENST00000295925 SPATA8Q6RVD6 105 aa6.78□□□□□ -1.32
CCNL1-201ENST00000295925 A0A0D9SG42 100 aa6.76□□□□□ -1.33
CCNL1-201ENST00000295925 KRTAP6-3Q3LI67 103 aa6.73□□□□□ -1.33
CCNL1-201ENST00000295925 CAMK2N1Q7Z7J9 78 aa6.65□□□□□ -1.34
CCNL1-201ENST00000295925 PRR15LQ9BU68 103 aa6.65□□□□□ -1.34
CCNL1-201ENST00000295925 LINC01558Q9Y6Z2 57 aa6.65□□□□□ -1.34
CCNL1-201ENST00000295925 KRTAP4-12Q9BQ66 201 aa6.63□□□□□ -1.35
CCNL1-201ENST00000295925 SPINT4Q6UDR6 99 aa6.62□□□□□ -1.35
CCNL1-201ENST00000295925 KRTAP12-2P59991 146 aa6.61□□□□□ -1.35
CCNL1-201ENST00000295925 A8MU10 97 aa6.59□□□□□ -1.35
CCNL1-201ENST00000295925 KRTAP10-7P60409 375 aaPredicted RBP6.59□□□□□ -1.35
CCNL1-201ENST00000295925 SMIM26A0A096LP01 95 aa6.58□□□□□ -1.36
CCNL1-201ENST00000295925 KRTAP12-1P59990 96 aa6.58□□□□□ -1.36
CCNL1-201ENST00000295925 LCE3BQ5TA77 95 aa6.56□□□□□ -1.36
CCNL1-201ENST00000295925 PCP4P48539 62 aa6.54□□□□□ -1.36
CCNL1-201ENST00000295925 KMT2DO14686 5537 aa6.52□□□□□ -1.37
CCNL1-201ENST00000295925 KRTAP4-8A0A0G2JLE6 195 aa6.52□□□□□ -1.37
CCNL1-201ENST00000295925 KRTAP5-9P26371 169 aa6.52□□□□□ -1.37
CCNL1-201ENST00000295925 KRTAP8-1Q8IUC2 63 aa6.52□□□□□ -1.37
CCNL1-201ENST00000295925 KRTAP9-9Q9BYP9 154 aa6.51□□□□□ -1.37
CCNL1-201ENST00000295925 KRTAP9-4Q9BYQ2 154 aa6.51□□□□□ -1.37
CCNL1-201ENST00000295925 KRTAP10-12P60413 245 aa6.5□□□□□ -1.37
CCNL1-201ENST00000295925 SPRR2FQ96RM1 72 aa6.46□□□□□ -1.38
CCNL1-201ENST00000295925 UQCR11O14957 56 aa6.44□□□□□ -1.38
CCNL1-201ENST00000295925 NEBP20929 6669 aa6.44□□□□□ -1.38
CCNL1-201ENST00000295925 PSPHP1O15172 72 aa6.41□□□□□ -1.38
CCNL1-201ENST00000295925 V9GYY9 64 aa6.41□□□□□ -1.38
CCNL1-201ENST00000295925 MUC12Q9UKN1 5478 aa6.39□□□□□ -1.39
CCNL1-201ENST00000295925 Q1T7F1 81 aa6.38□□□□□ -1.39
CCNL1-201ENST00000295925 MIR22HGQ0VDD5 57 aa6.34□□□□□ -1.39
CCNL1-201ENST00000295925 SPRR2EP22531 72 aa6.3□□□□□ -1.4
CCNL1-201ENST00000295925 SPRR2BP35325 72 aa6.3□□□□□ -1.4
CCNL1-201ENST00000295925 SPRR2AP35326 72 aa6.3□□□□□ -1.4
CCNL1-201ENST00000295925 RPS28P62857 69 aaKnown RBP6.27□□□□□ -1.41
CCNL1-201ENST00000295925 C10orf95Q9H7T3 257 aa6.27□□□□□ -1.41
CCNL1-201ENST00000295925 MDN1Q9NU22 5596 aa6.24□□□□□ -1.41
CCNL1-201ENST00000295925 LCE1AQ5T7P2 110 aa6.22□□□□□ -1.41
CCNL1-201ENST00000295925 A6NED7 52 aa6.2□□□□□ -1.42
CCNL1-201ENST00000295925 TNP1P09430 55 aa6.18□□□□□ -1.42
CCNL1-201ENST00000295925 K7ERS5 55 aa6.15□□□□□ -1.42
CCNL1-201ENST00000295925 KRTAP4-7Q9BYR0 210 aa6.15□□□□□ -1.42
CCNL1-201ENST00000295925 KRTAP20-1Q3LI63 56 aa6.14□□□□□ -1.43
CCNL1-201ENST00000295925 LCE1DQ5T752 114 aa6.14□□□□□ -1.43
CCNL1-201ENST00000295925 KRTAP19-7Q3SYF9 63 aa6.13□□□□□ -1.43
CCNL1-201ENST00000295925 SPRR2DP22532 72 aa6.09□□□□□ -1.43
CCNL1-201ENST00000295925 LCE3AQ5TA76 89 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms