RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 HSPG2P98160 4391 aa7.18□□□□□ -1.26
KCNIP3-201ENST00000295225 CRIPTQ9P021 101 aa7.15□□□□□ -1.26
KCNIP3-201ENST00000295225 KRTAP21-3Q3LHN1 58 aa7.14□□□□□ -1.27
KCNIP3-201ENST00000295225 KRTAP3-1Q9BYR8 98 aa7.13□□□□□ -1.27
KCNIP3-201ENST00000295225 RYR2Q92736 4967 aa7.12□□□□□ -1.27
KCNIP3-201ENST00000295225 FAT3Q8TDW7 4589 aa7.11□□□□□ -1.27
KCNIP3-201ENST00000295225 LPAP08519 4548 aa7.1□□□□□ -1.27
KCNIP3-201ENST00000295225 A0A1B0GVY2 172 aa7.07□□□□□ -1.28
KCNIP3-201ENST00000295225 H0YAA0 97 aa7.04□□□□□ -1.28
KCNIP3-201ENST00000295225 KRTAP10-4P60372 401 aaPredicted RBP7.03□□□□□ -1.28
KCNIP3-201ENST00000295225 RYR3Q15413 4870 aa7.01□□□□□ -1.29
KCNIP3-201ENST00000295225 A0A1B0GU33 70 aa7□□□□□ -1.29
KCNIP3-201ENST00000295225 TNXBP22105 4242 aa6.99□□□□□ -1.29
KCNIP3-201ENST00000295225 KIAA1109Q2LD37 5005 aa6.97□□□□□ -1.29
KCNIP3-201ENST00000295225 TPRXLQ17RH7 258 aa6.94□□□□□ -1.3
KCNIP3-201ENST00000295225 LRP2P98164 4655 aa6.92□□□□□ -1.3
KCNIP3-201ENST00000295225 KRTAP17-1Q9BYP8 105 aa6.91□□□□□ -1.3
KCNIP3-201ENST00000295225 RYR1P21817 5038 aa6.91□□□□□ -1.3
KCNIP3-201ENST00000295225 RPS29P62273 56 aaKnown RBP6.9□□□□□ -1.3
KCNIP3-201ENST00000295225 KRTAP10-8P60410 259 aa6.9□□□□□ -1.31
KCNIP3-201ENST00000295225 A0A0D9SG42 100 aa6.88□□□□□ -1.31
KCNIP3-201ENST00000295225 KRTAP23-1A1A580 65 aa6.88□□□□□ -1.31
KCNIP3-201ENST00000295225 Q5VSD8 79 aa6.87□□□□□ -1.31
KCNIP3-201ENST00000295225 H1FX-AS1Q4G0G2 97 aa6.87□□□□□ -1.31
KCNIP3-201ENST00000295225 COX6B2Q6YFQ2 88 aa6.85□□□□□ -1.31
KCNIP3-201ENST00000295225 ABCA13Q86UQ4 5058 aa6.83□□□□□ -1.32
KCNIP3-201ENST00000295225 KRTAP13-4Q3LI77 160 aa6.8□□□□□ -1.32
KCNIP3-201ENST00000295225 EPPK1P58107 5090 aaKnown RBP6.79□□□□□ -1.32
KCNIP3-201ENST00000295225 KRTAP3-3Q9BYR6 98 aa6.78□□□□□ -1.32
KCNIP3-201ENST00000295225 PRO2289Q9P1D8 64 aa6.75□□□□□ -1.33
KCNIP3-201ENST00000295225 XP32Q5T750 250 aa6.75□□□□□ -1.33
KCNIP3-201ENST00000295225 KRTAP10-6P60371 365 aaPredicted RBP6.73□□□□□ -1.33
KCNIP3-201ENST00000295225 C10orf95Q9H7T3 257 aa6.7□□□□□ -1.34
KCNIP3-201ENST00000295225 RPL37P61927 97 aaKnown RBP6.68□□□□□ -1.34
KCNIP3-201ENST00000295225 KRTAP3-2Q9BYR7 98 aa6.66□□□□□ -1.34
KCNIP3-201ENST00000295225 S4R3F8 94 aa6.66□□□□□ -1.34
KCNIP3-201ENST00000295225 MUC2Q02817 5179 aa6.64□□□□□ -1.35
KCNIP3-201ENST00000295225 R4GN34 69 aa6.63□□□□□ -1.35
KCNIP3-201ENST00000295225 MT1HL1P0DM35 61 aa6.6□□□□□ -1.35
KCNIP3-201ENST00000295225 PLAC4Q8WY50 150 aa6.58□□□□□ -1.36
KCNIP3-201ENST00000295225 KRTAP4-5Q9BYR2 181 aa6.56□□□□□ -1.36
KCNIP3-201ENST00000295225 KRTAP12-2P59991 146 aa6.56□□□□□ -1.36
KCNIP3-201ENST00000295225 KRTAP12-1P59990 96 aa6.41□□□□□ -1.38
KCNIP3-201ENST00000295225 HERC2O95714 4834 aa6.36□□□□□ -1.39
KCNIP3-201ENST00000295225 LORP23490 312 aaPredicted RBP6.36□□□□□ -1.39
KCNIP3-201ENST00000295225 MUC17Q685J3 4493 aa6.35□□□□□ -1.39
KCNIP3-201ENST00000295225 M0QZ58 72 aa6.33□□□□□ -1.4
KCNIP3-201ENST00000295225 INE1O15225 51 aa6.31□□□□□ -1.4
KCNIP3-201ENST00000295225 KRTAP4-1Q9BYQ7 146 aa6.31□□□□□ -1.4
KCNIP3-201ENST00000295225 FAT4Q6V0I7 4981 aa6.28□□□□□ -1.4
KCNIP3-201ENST00000295225 HERC1Q15751 4861 aa6.26□□□□□ -1.41
KCNIP3-201ENST00000295225 PCLOQ9Y6V0 5065 aa6.21□□□□□ -1.42
KCNIP3-201ENST00000295225 BIRC6Q9NR09 4857 aa6.14□□□□□ -1.43
KCNIP3-201ENST00000295225 RNF213Q63HN8 5207 aa6.14□□□□□ -1.43
KCNIP3-201ENST00000295225 KRTAP19-2Q3LHN2 52 aa5.99□□□□□ -1.45
KCNIP3-201ENST00000295225 UBR4Q5T4S7 5183 aa5.95□□□□□ -1.46
KCNIP3-201ENST00000295225 FLGP20930 4061 aaPredicted RBP5.94□□□□□ -1.46
KCNIP3-201ENST00000295225 HMCN2Q8NDA2 5059 aa5.92□□□□□ -1.46
KCNIP3-201ENST00000295225 LCE2DQ5TA82 110 aaPredicted RBP5.89□□□□□ -1.47
KCNIP3-201ENST00000295225 PP632Q6XCG6 107 aa5.88□□□□□ -1.47
KCNIP3-201ENST00000295225 SPRR5A0A1B0GTR4 108 aa5.82□□□□□ -1.48
KCNIP3-201ENST00000295225 M0R2T5 61 aa5.73□□□□□ -1.49
KCNIP3-201ENST00000295225 LCE2CQ5TA81 110 aa5.67□□□□□ -1.5
KCNIP3-201ENST00000295225 TNP1P09430 55 aa5.62□□□□□ -1.51
KCNIP3-201ENST00000295225 KRTAP19-1Q8IUB9 90 aa5.58□□□□□ -1.52
KCNIP3-201ENST00000295225 USH2AO75445 5202 aa5.57□□□□□ -1.52
KCNIP3-201ENST00000295225 MT1HP80294 61 aa5.55□□□□□ -1.52
KCNIP3-201ENST00000295225 KRTAP10-10P60014 251 aa5.54□□□□□ -1.52
KCNIP3-201ENST00000295225 MT1FP04733 61 aa5.52□□□□□ -1.53
KCNIP3-201ENST00000295225 KMT2DO14686 5537 aa5.49□□□□□ -1.53
KCNIP3-201ENST00000295225 LCE2AQ5TA79 106 aaPredicted RBP5.48□□□□□ -1.53
KCNIP3-201ENST00000295225 LCE3AQ5TA76 89 aa5.47□□□□□ -1.53
KCNIP3-201ENST00000295225 MT2AP02795 61 aa5.45□□□□□ -1.54
KCNIP3-201ENST00000295225 SPRR2GQ9BYE4 73 aa5.45□□□□□ -1.54
KCNIP3-201ENST00000295225 KRTAP9-8Q9BYQ0 159 aa5.39□□□□□ -1.55
KCNIP3-201ENST00000295225 LCE2BO14633 110 aa5.3□□□□□ -1.56
KCNIP3-201ENST00000295225 MT1BP07438 61 aa5.27□□□□□ -1.57
KCNIP3-201ENST00000295225 KRTAP10-5P60370 271 aa5.27□□□□□ -1.57
KCNIP3-201ENST00000295225 MT1XP80297 61 aa5.26□□□□□ -1.57
KCNIP3-201ENST00000295225 FSIP2Q5CZC0 6907 aa5.25□□□□□ -1.57
KCNIP3-201ENST00000295225 KRTAP10-7P60409 375 aaPredicted RBP5.24□□□□□ -1.57
KCNIP3-201ENST00000295225 KRTAP19-8Q3LI54 63 aa5.16□□□□□ -1.58
KCNIP3-201ENST00000295225 KRTAP10-12P60413 245 aa5.15□□□□□ -1.59
KCNIP3-201ENST00000295225 KRTAP9-3Q9BYQ3 159 aa5.14□□□□□ -1.59
KCNIP3-201ENST00000295225 KRTAP12-3P60328 96 aa5.13□□□□□ -1.59
KCNIP3-201ENST00000295225 KRTAP8-1Q8IUC2 63 aa5.1□□□□□ -1.59
KCNIP3-201ENST00000295225 KRTAP4-8A0A0G2JLE6 195 aa5.04□□□□□ -1.6
KCNIP3-201ENST00000295225 KRTAP4-8Q9BYQ9 185 aa5.04□□□□□ -1.6
KCNIP3-201ENST00000295225 KRTAP19-5Q3LI72 72 aa4.98□□□□□ -1.61
KCNIP3-201ENST00000295225 KRTAP2-2Q9BYT5 123 aa4.95□□□□□ -1.62
KCNIP3-201ENST00000295225 KRTAP4-7Q9BYR0 210 aa4.91□□□□□ -1.62
KCNIP3-201ENST00000295225 SSPOA2VEC9 5147 aa4.81□□□□□ -1.64
KCNIP3-201ENST00000295225 KRTAP9-6A8MVA2 160 aa4.8□□□□□ -1.64
KCNIP3-201ENST00000295225 DSTQ03001 7570 aaKnown RBP4.79□□□□□ -1.64
KCNIP3-201ENST00000295225 LCE3CQ5T5A8 94 aa4.79□□□□□ -1.64
KCNIP3-201ENST00000295225 MUC12Q9UKN1 5478 aa4.77□□□□□ -1.65
KCNIP3-201ENST00000295225 FCGBPQ9Y6R7 5405 aaPredicted RBP4.72□□□□□ -1.65
KCNIP3-201ENST00000295225 KRTAP19-7Q3SYF9 63 aa4.68□□□□□ -1.66
KCNIP3-201ENST00000295225 KRTAP9-2Q9BYQ4 174 aa4.59□□□□□ -1.67
KCNIP3-201ENST00000295225 KRTAP4-3Q9BYR4 195 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms