RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 COX6B2Q6YFQ2 88 aa8.85□□□□□ -0.99
CHRNE-201ENST00000293780 KRTAP25-1Q3LHN0 102 aa8.82□□□□□ -1
CHRNE-201ENST00000293780 RYR1P21817 5038 aa8.81□□□□□ -1
CHRNE-201ENST00000293780 KIAA1109Q2LD37 5005 aa8.79□□□□□ -1
CHRNE-201ENST00000293780 MYCBP2O75592 4640 aa8.79□□□□□ -1
CHRNE-201ENST00000293780 KRTAP17-1Q9BYP8 105 aa8.75□□□□□ -1.01
CHRNE-201ENST00000293780 Q5VSD8 79 aa8.73□□□□□ -1.01
CHRNE-201ENST00000293780 KRTAP10-8P60410 259 aa8.72□□□□□ -1.01
CHRNE-201ENST00000293780 DMBT1Q9UGM3 2413 aaPredicted RBP8.71□□□□□ -1.02
CHRNE-201ENST00000293780 KRTAP3-3Q9BYR6 98 aa8.69□□□□□ -1.02
CHRNE-201ENST00000293780 ROMO1P60602 79 aa8.68□□□□□ -1.02
CHRNE-201ENST00000293780 CRIPTQ9P021 101 aa8.66□□□□□ -1.02
CHRNE-201ENST00000293780 RPL37P61927 97 aaKnown RBP8.65□□□□□ -1.02
CHRNE-201ENST00000293780 K7ERS5 55 aa8.63□□□□□ -1.03
CHRNE-201ENST00000293780 XP32Q5T750 250 aa8.63□□□□□ -1.03
CHRNE-201ENST00000293780 KRTAP10-6P60371 365 aaPredicted RBP8.63□□□□□ -1.03
CHRNE-201ENST00000293780 KRTAP13-4Q3LI77 160 aa8.58□□□□□ -1.04
CHRNE-201ENST00000293780 KRTAP3-2Q9BYR7 98 aa8.56□□□□□ -1.04
CHRNE-201ENST00000293780 LPAP08519 4548 aa8.55□□□□□ -1.04
CHRNE-201ENST00000293780 S4R3F8 94 aa8.54□□□□□ -1.04
CHRNE-201ENST00000293780 A0A0D9SG42 100 aa8.52□□□□□ -1.05
CHRNE-201ENST00000293780 KRTAP4-5Q9BYR2 181 aa8.52□□□□□ -1.05
CHRNE-201ENST00000293780 BIRC6Q9NR09 4857 aa8.5□□□□□ -1.05
CHRNE-201ENST00000293780 P0C880 135 aa8.47□□□□□ -1.05
CHRNE-201ENST00000293780 MT1HL1P0DM35 61 aa8.44□□□□□ -1.06
CHRNE-201ENST00000293780 LRP2P98164 4655 aa8.44□□□□□ -1.06
CHRNE-201ENST00000293780 HERC2O95714 4834 aa8.4□□□□□ -1.06
CHRNE-201ENST00000293780 ABCA13Q86UQ4 5058 aa8.4□□□□□ -1.07
CHRNE-201ENST00000293780 TPRXLQ17RH7 258 aa8.35□□□□□ -1.07
CHRNE-201ENST00000293780 SPINT4Q6UDR6 99 aa8.31□□□□□ -1.08
CHRNE-201ENST00000293780 KRTAP12-2P59991 146 aa8.29□□□□□ -1.08
CHRNE-201ENST00000293780 C10orf95Q9H7T3 257 aa8.28□□□□□ -1.08
CHRNE-201ENST00000293780 KRTAP12-1P59990 96 aa8.2□□□□□ -1.1
CHRNE-201ENST00000293780 J3QL48 77 aa8.17□□□□□ -1.1
CHRNE-201ENST00000293780 PCLOQ9Y6V0 5065 aa8.13□□□□□ -1.11
CHRNE-201ENST00000293780 KRTAP15-1Q3LI76 137 aa8.12□□□□□ -1.11
CHRNE-201ENST00000293780 M0QZ58 72 aa8.09□□□□□ -1.11
CHRNE-201ENST00000293780 NDUFAF8A1L188 74 aa8.08□□□□□ -1.12
CHRNE-201ENST00000293780 MUC17Q685J3 4493 aa8.06□□□□□ -1.12
CHRNE-201ENST00000293780 HERC1Q15751 4861 aa7.96□□□□□ -1.14
CHRNE-201ENST00000293780 KRTAP4-1Q9BYQ7 146 aa7.93□□□□□ -1.14
CHRNE-201ENST00000293780 R4GN34 69 aa7.93□□□□□ -1.14
CHRNE-201ENST00000293780 LORP23490 312 aaPredicted RBP7.93□□□□□ -1.14
CHRNE-201ENST00000293780 SEC61BP60468 96 aaKnown RBP7.9□□□□□ -1.15
CHRNE-201ENST00000293780 HMCN2Q8NDA2 5059 aa7.81□□□□□ -1.16
CHRNE-201ENST00000293780 KRTAP19-2Q3LHN2 52 aa7.76□□□□□ -1.17
CHRNE-201ENST00000293780 MUC2Q02817 5179 aa7.75□□□□□ -1.17
CHRNE-201ENST00000293780 FLGP20930 4061 aaPredicted RBP7.67□□□□□ -1.18
CHRNE-201ENST00000293780 PLAC4Q8WY50 150 aa7.62□□□□□ -1.19
CHRNE-201ENST00000293780 CAMK2N1Q7Z7J9 78 aa7.54□□□□□ -1.2
CHRNE-201ENST00000293780 UBR4Q5T4S7 5183 aa7.5□□□□□ -1.21
CHRNE-201ENST00000293780 RNF213Q63HN8 5207 aa7.41□□□□□ -1.22
CHRNE-201ENST00000293780 PP632Q6XCG6 107 aa7.38□□□□□ -1.23
CHRNE-201ENST00000293780 FAT4Q6V0I7 4981 aa7.36□□□□□ -1.23
CHRNE-201ENST00000293780 LUZP6Q538Z0 58 aa7.35□□□□□ -1.23
CHRNE-201ENST00000293780 LCE2CQ5TA81 110 aa7.26□□□□□ -1.25
CHRNE-201ENST00000293780 A0A0A0MQY5 61 aa7.26□□□□□ -1.25
CHRNE-201ENST00000293780 TNP1P09430 55 aa7.24□□□□□ -1.25
CHRNE-201ENST00000293780 KRTAP19-1Q8IUB9 90 aa7.14□□□□□ -1.27
CHRNE-201ENST00000293780 SPRR2GQ9BYE4 73 aa7.13□□□□□ -1.27
CHRNE-201ENST00000293780 M0R2T5 61 aa7.1□□□□□ -1.27
CHRNE-201ENST00000293780 KRTAP23-1A1A580 65 aa7.09□□□□□ -1.27
CHRNE-201ENST00000293780 MT1HP80294 61 aa7.06□□□□□ -1.28
CHRNE-201ENST00000293780 SPRR5A0A1B0GTR4 108 aa7.01□□□□□ -1.29
CHRNE-201ENST00000293780 LCE2DQ5TA82 110 aaPredicted RBP7□□□□□ -1.29
CHRNE-201ENST00000293780 MT1FP04733 61 aa6.99□□□□□ -1.29
CHRNE-201ENST00000293780 MT2AP02795 61 aa6.96□□□□□ -1.29
CHRNE-201ENST00000293780 KRTAP10-10P60014 251 aa6.96□□□□□ -1.3
CHRNE-201ENST00000293780 LCE3AQ5TA76 89 aa6.92□□□□□ -1.3
CHRNE-201ENST00000293780 KRTAP9-8Q9BYQ0 159 aa6.91□□□□□ -1.3
CHRNE-201ENST00000293780 KRTAP19-8Q3LI54 63 aa6.79□□□□□ -1.32
CHRNE-201ENST00000293780 LCE2AQ5TA79 106 aaPredicted RBP6.77□□□□□ -1.32
CHRNE-201ENST00000293780 MT1BP07438 61 aa6.76□□□□□ -1.33
CHRNE-201ENST00000293780 KRTAP10-5P60370 271 aa6.74□□□□□ -1.33
CHRNE-201ENST00000293780 MT1XP80297 61 aa6.73□□□□□ -1.33
CHRNE-201ENST00000293780 KRTAP8-1Q8IUC2 63 aa6.69□□□□□ -1.34
CHRNE-201ENST00000293780 KRTAP9-3Q9BYQ3 159 aa6.61□□□□□ -1.35
CHRNE-201ENST00000293780 KRTAP10-7P60409 375 aaPredicted RBP6.58□□□□□ -1.36
CHRNE-201ENST00000293780 KRTAP10-12P60413 245 aa6.58□□□□□ -1.36
CHRNE-201ENST00000293780 KRTAP12-3P60328 96 aa6.55□□□□□ -1.36
CHRNE-201ENST00000293780 PRO2289Q9P1D8 64 aa6.53□□□□□ -1.36
CHRNE-201ENST00000293780 INE1O15225 51 aa6.43□□□□□ -1.38
CHRNE-201ENST00000293780 LCE2BO14633 110 aa6.4□□□□□ -1.39
CHRNE-201ENST00000293780 USH2AO75445 5202 aa6.39□□□□□ -1.39
CHRNE-201ENST00000293780 KMT2DO14686 5537 aa6.37□□□□□ -1.39
CHRNE-201ENST00000293780 KRTAP19-5Q3LI72 72 aa6.3□□□□□ -1.4
CHRNE-201ENST00000293780 KRTAP9-2Q9BYQ4 174 aa6.21□□□□□ -1.42
CHRNE-201ENST00000293780 KRTAP4-8A0A0G2JLE6 195 aa6.19□□□□□ -1.42
CHRNE-201ENST00000293780 KRTAP4-8Q9BYQ9 185 aa6.19□□□□□ -1.42
CHRNE-201ENST00000293780 FSIP2Q5CZC0 6907 aa6.19□□□□□ -1.42
CHRNE-201ENST00000293780 LCE3CQ5T5A8 94 aa6.17□□□□□ -1.42
CHRNE-201ENST00000293780 SSPOA2VEC9 5147 aa6.11□□□□□ -1.43
CHRNE-201ENST00000293780 KRTAP9-6A8MVA2 160 aa6.02□□□□□ -1.45
CHRNE-201ENST00000293780 KRTAP19-7Q3SYF9 63 aa6□□□□□ -1.45
CHRNE-201ENST00000293780 KRTAP4-7Q9BYR0 210 aa5.97□□□□□ -1.45
CHRNE-201ENST00000293780 KRTAP19-6Q3LI70 58 aa5.94□□□□□ -1.46
CHRNE-201ENST00000293780 KRTAP9-6A0A140TA67 174 aa5.91□□□□□ -1.46
CHRNE-201ENST00000293780 CRCT1Q9UGL9 99 aa5.91□□□□□ -1.46
CHRNE-201ENST00000293780 FCGBPQ9Y6R7 5405 aaPredicted RBP5.83□□□□□ -1.48
CHRNE-201ENST00000293780 MT1LQ93083 61 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms