RNA–Protein interactions for RNA: ENST00000287916.8

CLDN12-201, Transcript of claudin 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN12, Length 3,565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-201ENST00000287916 NDUFAF8A1L188 74 aa4.2□□□□□ -1.74
CLDN12-201ENST00000287916 P0C880 135 aa4.2□□□□□ -1.74
CLDN12-201ENST00000287916 S4R3F8 94 aa4.19□□□□□ -1.74
CLDN12-201ENST00000287916 KRTAP13-4Q3LI77 160 aa4.18□□□□□ -1.74
CLDN12-201ENST00000287916 C20orf166-AS1Q96NR2 134 aa4.17□□□□□ -1.74
CLDN12-201ENST00000287916 KRTAP10-8P60410 259 aa4.15□□□□□ -1.74
CLDN12-201ENST00000287916 TPRXLQ17RH7 258 aa4.14□□□□□ -1.75
CLDN12-201ENST00000287916 APOBP04114 4563 aaKnown RBP4.13□□□□□ -1.75
CLDN12-201ENST00000287916 PKD1P98161 4303 aa4.11□□□□□ -1.75
CLDN12-201ENST00000287916 Q5VSD8 79 aa4.1□□□□□ -1.75
CLDN12-201ENST00000287916 KRTAP12-2P59991 146 aa4.09□□□□□ -1.75
CLDN12-201ENST00000287916 HSPG2P98160 4391 aa4.09□□□□□ -1.76
CLDN12-201ENST00000287916 SACSQ9NZJ4 4579 aa4.08□□□□□ -1.76
CLDN12-201ENST00000287916 KRTAP10-6P60371 365 aaPredicted RBP4.08□□□□□ -1.76
CLDN12-201ENST00000287916 M0QZ58 72 aa4.06□□□□□ -1.76
CLDN12-201ENST00000287916 KMT2CQ8NEZ4 4911 aaKnown RBP4.05□□□□□ -1.76
CLDN12-201ENST00000287916 XP32Q5T750 250 aa4.05□□□□□ -1.76
CLDN12-201ENST00000287916 RPS29P62273 56 aaKnown RBP4.04□□□□□ -1.76
CLDN12-201ENST00000287916 R4GN34 69 aa4.04□□□□□ -1.76
CLDN12-201ENST00000287916 LRP2P98164 4655 aa4.03□□□□□ -1.76
CLDN12-201ENST00000287916 KIAA1109Q2LD37 5005 aa4.02□□□□□ -1.77
CLDN12-201ENST00000287916 LPAP08519 4548 aa4.01□□□□□ -1.77
CLDN12-201ENST00000287916 LCE2BO14633 110 aa4□□□□□ -1.77
CLDN12-201ENST00000287916 RYR1P21817 5038 aa3.97□□□□□ -1.77
CLDN12-201ENST00000287916 KRTAP12-1P59990 96 aa3.96□□□□□ -1.78
CLDN12-201ENST00000287916 CAMK2N1Q7Z7J9 78 aa3.96□□□□□ -1.78
CLDN12-201ENST00000287916 KRTAP10-4P60372 401 aaPredicted RBP3.95□□□□□ -1.78
CLDN12-201ENST00000287916 RYR2Q92736 4967 aa3.93□□□□□ -1.78
CLDN12-201ENST00000287916 A0A1B0GVY2 172 aa3.93□□□□□ -1.78
CLDN12-201ENST00000287916 RYR3Q15413 4870 aa3.92□□□□□ -1.78
CLDN12-201ENST00000287916 PKHD1L1Q86WI1 4243 aa3.91□□□□□ -1.78
CLDN12-201ENST00000287916 MUC2Q02817 5179 aa3.91□□□□□ -1.78
CLDN12-201ENST00000287916 EPPK1P58107 5090 aaKnown RBP3.89□□□□□ -1.79
CLDN12-201ENST00000287916 LCE2AQ5TA79 106 aaPredicted RBP3.89□□□□□ -1.79
CLDN12-201ENST00000287916 J3QL48 77 aa3.86□□□□□ -1.79
CLDN12-201ENST00000287916 KRTAP15-1Q3LI76 137 aa3.86□□□□□ -1.79
CLDN12-201ENST00000287916 LUZP6Q538Z0 58 aa3.86□□□□□ -1.79
CLDN12-201ENST00000287916 ABCA13Q86UQ4 5058 aa3.85□□□□□ -1.79
CLDN12-201ENST00000287916 LORP23490 312 aaPredicted RBP3.84□□□□□ -1.79
CLDN12-201ENST00000287916 PLAC4Q8WY50 150 aa3.84□□□□□ -1.8
CLDN12-201ENST00000287916 KRTAP17-1Q9BYP8 105 aa3.83□□□□□ -1.8
CLDN12-201ENST00000287916 TNXBP22105 4242 aa3.78□□□□□ -1.8
CLDN12-201ENST00000287916 MT1HL1P0DM35 61 aa3.77□□□□□ -1.81
CLDN12-201ENST00000287916 KRTAP4-5Q9BYR2 181 aa3.77□□□□□ -1.81
CLDN12-201ENST00000287916 SEC61BP60468 96 aaKnown RBP3.73□□□□□ -1.81
CLDN12-201ENST00000287916 M0R2T5 61 aa3.71□□□□□ -1.82
CLDN12-201ENST00000287916 A0A0A0MQY5 61 aa3.7□□□□□ -1.82
CLDN12-201ENST00000287916 LOC100996750A0A140TA64 210 aa3.7□□□□□ -1.82
CLDN12-201ENST00000287916 KRTAP4-6Q9BYQ5 205 aa3.7□□□□□ -1.82
CLDN12-201ENST00000287916 LCE2CQ5TA81 110 aa3.69□□□□□ -1.82
CLDN12-201ENST00000287916 FAT4Q6V0I7 4981 aa3.67□□□□□ -1.82
CLDN12-201ENST00000287916 BIRC6Q9NR09 4857 aa3.67□□□□□ -1.82
CLDN12-201ENST00000287916 RNF213Q63HN8 5207 aa3.66□□□□□ -1.82
CLDN12-201ENST00000287916 KRTAP4-1Q9BYQ7 146 aa3.66□□□□□ -1.82
CLDN12-201ENST00000287916 HERC2O95714 4834 aa3.63□□□□□ -1.83
CLDN12-201ENST00000287916 TNP1P09430 55 aa3.61□□□□□ -1.83
CLDN12-201ENST00000287916 HERC1Q15751 4861 aa3.58□□□□□ -1.84
CLDN12-201ENST00000287916 PP632Q6XCG6 107 aa3.52□□□□□ -1.85
CLDN12-201ENST00000287916 HMCN2Q8NDA2 5059 aa3.51□□□□□ -1.85
CLDN12-201ENST00000287916 PCLOQ9Y6V0 5065 aa3.49□□□□□ -1.85
CLDN12-201ENST00000287916 KRTAP10-10P60014 251 aa3.47□□□□□ -1.85
CLDN12-201ENST00000287916 UBR4Q5T4S7 5183 aa3.45□□□□□ -1.86
CLDN12-201ENST00000287916 MUC17Q685J3 4493 aa3.44□□□□□ -1.86
CLDN12-201ENST00000287916 LCE3AQ5TA76 89 aa3.39□□□□□ -1.87
CLDN12-201ENST00000287916 FLGP20930 4061 aaPredicted RBP3.37□□□□□ -1.87
CLDN12-201ENST00000287916 FSIP2Q5CZC0 6907 aa3.35□□□□□ -1.87
CLDN12-201ENST00000287916 USH2AO75445 5202 aa3.34□□□□□ -1.88
CLDN12-201ENST00000287916 KMT2DO14686 5537 aa3.33□□□□□ -1.88
CLDN12-201ENST00000287916 KRTAP19-2Q3LHN2 52 aa3.29□□□□□ -1.88
CLDN12-201ENST00000287916 KRTAP4-8Q9BYQ9 185 aa3.28□□□□□ -1.88
CLDN12-201ENST00000287916 KRTAP19-1Q8IUB9 90 aa3.24□□□□□ -1.89
CLDN12-201ENST00000287916 MT1FP04733 61 aa3.22□□□□□ -1.89
CLDN12-201ENST00000287916 KRTAP12-3P60328 96 aa3.21□□□□□ -1.9
CLDN12-201ENST00000287916 OBSCNQ5VST9 7968 aa3.2□□□□□ -1.9
CLDN12-201ENST00000287916 KRTAP10-12P60413 245 aa3.19□□□□□ -1.9
CLDN12-201ENST00000287916 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.18□□□□□ -1.9
CLDN12-201ENST00000287916 KRTAP9-2Q9BYQ4 174 aa3.18□□□□□ -1.9
CLDN12-201ENST00000287916 MT2AP02795 61 aa3.18□□□□□ -1.9
CLDN12-201ENST00000287916 MT1HP80294 61 aa3.18□□□□□ -1.9
CLDN12-201ENST00000287916 SPRR2GQ9BYE4 73 aa3.16□□□□□ -1.9
CLDN12-201ENST00000287916 KRTAP9-6A0A140TA67 174 aa3.16□□□□□ -1.9
CLDN12-201ENST00000287916 KRTAP4-12Q9BQ66 201 aa3.14□□□□□ -1.91
CLDN12-201ENST00000287916 KRTAP10-7P60409 375 aaPredicted RBP3.13□□□□□ -1.91
CLDN12-201ENST00000287916 SPRR5A0A1B0GTR4 108 aa3.13□□□□□ -1.91
CLDN12-201ENST00000287916 DSTQ03001 7570 aaKnown RBP3.11□□□□□ -1.91
CLDN12-201ENST00000287916 PRO2289Q9P1D8 64 aa3.1□□□□□ -1.91
CLDN12-201ENST00000287916 KRTAP23-1A1A580 65 aa3.1□□□□□ -1.91
CLDN12-201ENST00000287916 MT1XP80297 61 aa3.07□□□□□ -1.92
CLDN12-201ENST00000287916 KRTAP10-5P60370 271 aa3.07□□□□□ -1.92
CLDN12-201ENST00000287916 KRTAP4-8A0A0G2JLE6 195 aa3.06□□□□□ -1.92
CLDN12-201ENST00000287916 KRTAP8-1Q8IUC2 63 aa3.06□□□□□ -1.92
CLDN12-201ENST00000287916 KRTAP9-8Q9BYQ0 159 aa3.05□□□□□ -1.92
CLDN12-201ENST00000287916 CRCT1Q9UGL9 99 aa3.04□□□□□ -1.92
CLDN12-201ENST00000287916 SYNE1Q8NF91 8797 aaKnown RBP3.04□□□□□ -1.92
CLDN12-201ENST00000287916 MT1BP07438 61 aa3.04□□□□□ -1.92
CLDN12-201ENST00000287916 KRTAP19-5Q3LI72 72 aa3.04□□□□□ -1.92
CLDN12-201ENST00000287916 LCE3BQ5TA77 95 aa3.04□□□□□ -1.92
CLDN12-201ENST00000287916 FCGBPQ9Y6R7 5405 aaPredicted RBP3.03□□□□□ -1.92
CLDN12-201ENST00000287916 KRTAP9-9Q9BYP9 154 aa3.02□□□□□ -1.93
CLDN12-201ENST00000287916 KRTAP9-4Q9BYQ2 154 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms