RNA–Protein interactions for RNA: ENST00000284384.6

PRKCA-201, Transcript of protein kinase C alpha, humanhuman

TSL 5

Gene PRKCA, Length 2,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-201ENST00000284384 FAT2Q9NYQ8 4349 aa4.49□□□□□ -1.69
PRKCA-201ENST00000284384 EPPK1P58107 5090 aaKnown RBP4.49□□□□□ -1.69
PRKCA-201ENST00000284384 DYNC1H1Q14204 4646 aaKnown RBP4.48□□□□□ -1.69
PRKCA-201ENST00000284384 IGKV2-30P06310 120 aa4.43□□□□□ -1.7
PRKCA-201ENST00000284384 LINC00304Q8N9R0 145 aa4.42□□□□□ -1.7
PRKCA-201ENST00000284384 IGKV2D-30A0A075B6S6 120 aa4.39□□□□□ -1.71
PRKCA-201ENST00000284384 KRTAP10-4P60372 401 aaPredicted RBP4.39□□□□□ -1.71
PRKCA-201ENST00000284384 R4GN34 69 aa4.39□□□□□ -1.71
PRKCA-201ENST00000284384 VPS13BQ7Z7G8 4022 aa4.39□□□□□ -1.71
PRKCA-201ENST00000284384 LRP1BQ9NZR2 4599 aa4.37□□□□□ -1.71
PRKCA-201ENST00000284384 KRTAP15-1Q3LI76 137 aa4.37□□□□□ -1.71
PRKCA-201ENST00000284384 PRO2289Q9P1D8 64 aa4.32□□□□□ -1.72
PRKCA-201ENST00000284384 RYR1P21817 5038 aa4.32□□□□□ -1.72
PRKCA-201ENST00000284384 PKHD1L1Q86WI1 4243 aa4.32□□□□□ -1.72
PRKCA-201ENST00000284384 SPINT4Q6UDR6 99 aa4.31□□□□□ -1.72
PRKCA-201ENST00000284384 APOBP04114 4563 aaKnown RBP4.31□□□□□ -1.72
PRKCA-201ENST00000284384 PKHD1P08F94 4074 aa4.31□□□□□ -1.72
PRKCA-201ENST00000284384 H0YAA0 97 aa4.3□□□□□ -1.72
PRKCA-201ENST00000284384 SMR3BP02814 79 aaPredicted RBP4.29□□□□□ -1.72
PRKCA-201ENST00000284384 KRTAP4-5Q9BYR2 181 aa4.28□□□□□ -1.72
PRKCA-201ENST00000284384 FLG2Q5D862 2391 aaPredicted RBP4.26□□□□□ -1.73
PRKCA-201ENST00000284384 CRIPTQ9P021 101 aa4.26□□□□□ -1.73
PRKCA-201ENST00000284384 HSPG2P98160 4391 aa4.26□□□□□ -1.73
PRKCA-201ENST00000284384 PCLOQ9Y6V0 5065 aa4.26□□□□□ -1.73
PRKCA-201ENST00000284384 KIAA1109Q2LD37 5005 aa4.25□□□□□ -1.73
PRKCA-201ENST00000284384 Q5VSD8 79 aa4.24□□□□□ -1.73
PRKCA-201ENST00000284384 KRTAP10-8P60410 259 aa4.23□□□□□ -1.73
PRKCA-201ENST00000284384 H1FX-AS1Q4G0G2 97 aa4.23□□□□□ -1.73
PRKCA-201ENST00000284384 TPRXLQ17RH7 258 aa4.21□□□□□ -1.74
PRKCA-201ENST00000284384 C9orf92A6NGG3 77 aa4.18□□□□□ -1.74
PRKCA-201ENST00000284384 ABCA13Q86UQ4 5058 aa4.16□□□□□ -1.74
PRKCA-201ENST00000284384 RPL37P61927 97 aaKnown RBP4.14□□□□□ -1.75
PRKCA-201ENST00000284384 COX6B2Q6YFQ2 88 aa4.13□□□□□ -1.75
PRKCA-201ENST00000284384 TNXBP22105 4242 aa4.13□□□□□ -1.75
PRKCA-201ENST00000284384 FAT1Q14517 4588 aa4.12□□□□□ -1.75
PRKCA-201ENST00000284384 XP32Q5T750 250 aa4.09□□□□□ -1.75
PRKCA-201ENST00000284384 MT1HL1P0DM35 61 aa4.09□□□□□ -1.75
PRKCA-201ENST00000284384 FAT3Q8TDW7 4589 aa4.07□□□□□ -1.76
PRKCA-201ENST00000284384 A0A0D9SG42 100 aa4.06□□□□□ -1.76
PRKCA-201ENST00000284384 MYCBP2O75592 4640 aa4.06□□□□□ -1.76
PRKCA-201ENST00000284384 C10orf95Q9H7T3 257 aa4.04□□□□□ -1.76
PRKCA-201ENST00000284384 DMBT1Q9UGM3 2413 aaPredicted RBP4.03□□□□□ -1.76
PRKCA-201ENST00000284384 LRP1Q07954 4544 aaKnown RBP3.98□□□□□ -1.77
PRKCA-201ENST00000284384 KRTAP13-4Q3LI77 160 aa3.98□□□□□ -1.77
PRKCA-201ENST00000284384 S4R3F8 94 aa3.98□□□□□ -1.77
PRKCA-201ENST00000284384 KRTAP10-6P60371 365 aaPredicted RBP3.97□□□□□ -1.77
PRKCA-201ENST00000284384 HERC1Q15751 4861 aa3.9□□□□□ -1.78
PRKCA-201ENST00000284384 HMCN2Q8NDA2 5059 aa3.9□□□□□ -1.78
PRKCA-201ENST00000284384 INE1O15225 51 aa3.9□□□□□ -1.78
PRKCA-201ENST00000284384 KRTAP12-2P59991 146 aa3.9□□□□□ -1.79
PRKCA-201ENST00000284384 KRTAP19-4Q3LI73 84 aa3.88□□□□□ -1.79
PRKCA-201ENST00000284384 KRTAP12-1P59990 96 aa3.84□□□□□ -1.79
PRKCA-201ENST00000284384 LCE5AQ5TCM9 118 aa3.83□□□□□ -1.8
PRKCA-201ENST00000284384 M0QZ58 72 aa3.82□□□□□ -1.8
PRKCA-201ENST00000284384 PLAC4Q8WY50 150 aa3.79□□□□□ -1.8
PRKCA-201ENST00000284384 MUC17Q685J3 4493 aa3.78□□□□□ -1.8
PRKCA-201ENST00000284384 LRP2P98164 4655 aa3.74□□□□□ -1.81
PRKCA-201ENST00000284384 KRTAP19-2Q3LHN2 52 aa3.71□□□□□ -1.82
PRKCA-201ENST00000284384 KRTAP4-1Q9BYQ7 146 aa3.69□□□□□ -1.82
PRKCA-201ENST00000284384 LPAP08519 4548 aa3.69□□□□□ -1.82
PRKCA-201ENST00000284384 KRTAP9-4Q9BYQ2 154 aa3.68□□□□□ -1.82
PRKCA-201ENST00000284384 RNF213Q63HN8 5207 aa3.67□□□□□ -1.82
PRKCA-201ENST00000284384 KRTAP9-2Q9BYQ4 174 aa3.65□□□□□ -1.82
PRKCA-201ENST00000284384 PP632Q6XCG6 107 aa3.64□□□□□ -1.83
PRKCA-201ENST00000284384 UBR4Q5T4S7 5183 aa3.64□□□□□ -1.83
PRKCA-201ENST00000284384 KRTAP9-6A0A140TA67 174 aa3.62□□□□□ -1.83
PRKCA-201ENST00000284384 KRTAP2-2Q9BYT5 123 aa3.58□□□□□ -1.84
PRKCA-201ENST00000284384 FLGP20930 4061 aaPredicted RBP3.56□□□□□ -1.84
PRKCA-201ENST00000284384 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
PRKCA-201ENST00000284384 FAT4Q6V0I7 4981 aa3.49□□□□□ -1.85
PRKCA-201ENST00000284384 CRCT1Q9UGL9 99 aa3.46□□□□□ -1.86
PRKCA-201ENST00000284384 LCE1FQ5T754 118 aa3.46□□□□□ -1.86
PRKCA-201ENST00000284384 SPRR2GQ9BYE4 73 aa3.46□□□□□ -1.86
PRKCA-201ENST00000284384 KRTAP9-7A8MTY7 169 aa3.44□□□□□ -1.86
PRKCA-201ENST00000284384 MT1HP80294 61 aa3.42□□□□□ -1.86
PRKCA-201ENST00000284384 TNP1P09430 55 aa3.39□□□□□ -1.87
PRKCA-201ENST00000284384 SPRR5A0A1B0GTR4 108 aa3.39□□□□□ -1.87
PRKCA-201ENST00000284384 MUC2Q02817 5179 aa3.38□□□□□ -1.87
PRKCA-201ENST00000284384 LCE4AQ5TA78 99 aa3.38□□□□□ -1.87
PRKCA-201ENST00000284384 KRTAP19-1Q8IUB9 90 aa3.36□□□□□ -1.87
PRKCA-201ENST00000284384 M0R2T5 61 aa3.36□□□□□ -1.87
PRKCA-201ENST00000284384 MT2AP02795 61 aa3.34□□□□□ -1.88
PRKCA-201ENST00000284384 KRTAP9-8Q9BYQ0 159 aa3.33□□□□□ -1.88
PRKCA-201ENST00000284384 KRTAP19-8Q3LI54 63 aa3.33□□□□□ -1.88
PRKCA-201ENST00000284384 MT1FP04733 61 aa3.31□□□□□ -1.88
PRKCA-201ENST00000284384 LCE1AQ5T7P2 110 aa3.31□□□□□ -1.88
PRKCA-201ENST00000284384 MT3P25713 68 aa3.3□□□□□ -1.88
PRKCA-201ENST00000284384 KRTAP10-10P60014 251 aa3.29□□□□□ -1.88
PRKCA-201ENST00000284384 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.23□□□□□ -1.89
PRKCA-201ENST00000284384 KRTAP9-3Q9BYQ3 159 aa3.21□□□□□ -1.9
PRKCA-201ENST00000284384 MT1BP07438 61 aa3.21□□□□□ -1.9
PRKCA-201ENST00000284384 LCE3CQ5T5A8 94 aa3.2□□□□□ -1.9
PRKCA-201ENST00000284384 KRTAP10-5P60370 271 aa3.16□□□□□ -1.9
PRKCA-201ENST00000284384 MT1XP80297 61 aa3.16□□□□□ -1.9
PRKCA-201ENST00000284384 LCE3AQ5TA76 89 aa3.14□□□□□ -1.91
PRKCA-201ENST00000284384 KRTAP8-1Q8IUC2 63 aa3.14□□□□□ -1.91
PRKCA-201ENST00000284384 KRTAP19-6Q3LI70 58 aa3.13□□□□□ -1.91
PRKCA-201ENST00000284384 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
PRKCA-201ENST00000284384 KRTAP10-12P60413 245 aa3.1□□□□□ -1.91
PRKCA-201ENST00000284384 KRTAP6-3Q3LI67 103 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 358.5 ms