RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 DNAH17Q9UFH2 4485 aa5.85□□□□□ -1.47
USP6NL-201ENST00000277575 PKD1P98161 4303 aa5.85□□□□□ -1.47
USP6NL-201ENST00000277575 DNAH8Q96JB1 4490 aa5.85□□□□□ -1.47
USP6NL-201ENST00000277575 KMT2CQ8NEZ4 4911 aaKnown RBP5.84□□□□□ -1.47
USP6NL-201ENST00000277575 DNAH11Q96DT5 4516 aa5.8□□□□□ -1.48
USP6NL-201ENST00000277575 DNAH5Q8TE73 4624 aa5.77□□□□□ -1.49
USP6NL-201ENST00000277575 H0YAA0 97 aa5.76□□□□□ -1.49
USP6NL-201ENST00000277575 ALMS1Q8TCU4 4167 aa5.76□□□□□ -1.49
USP6NL-201ENST00000277575 KRTAP10-10P60014 251 aa5.74□□□□□ -1.49
USP6NL-201ENST00000277575 P0C880 135 aa5.74□□□□□ -1.49
USP6NL-201ENST00000277575 SACSQ9NZJ4 4579 aa5.71□□□□□ -1.49
USP6NL-201ENST00000277575 RYR3Q15413 4870 aa5.68□□□□□ -1.5
USP6NL-201ENST00000277575 C10orf95Q9H7T3 257 aa5.68□□□□□ -1.5
USP6NL-201ENST00000277575 PP632Q6XCG6 107 aa5.67□□□□□ -1.5
USP6NL-201ENST00000277575 LRP1BQ9NZR2 4599 aa5.67□□□□□ -1.5
USP6NL-201ENST00000277575 NDUFAF8A1L188 74 aa5.64□□□□□ -1.51
USP6NL-201ENST00000277575 VPS13BQ7Z7G8 4022 aa5.62□□□□□ -1.51
USP6NL-201ENST00000277575 PRO2289Q9P1D8 64 aa5.56□□□□□ -1.52
USP6NL-201ENST00000277575 RYR2Q92736 4967 aa5.51□□□□□ -1.53
USP6NL-201ENST00000277575 KRTAP3-1Q9BYR8 98 aa5.5□□□□□ -1.53
USP6NL-201ENST00000277575 FAT1Q14517 4588 aa5.47□□□□□ -1.53
USP6NL-201ENST00000277575 MT1HL1P0DM35 61 aa5.44□□□□□ -1.54
USP6NL-201ENST00000277575 EPPK1P58107 5090 aaKnown RBP5.44□□□□□ -1.54
USP6NL-201ENST00000277575 KRTAP12-2P59991 146 aa5.43□□□□□ -1.54
USP6NL-201ENST00000277575 PKHD1L1Q86WI1 4243 aa5.41□□□□□ -1.54
USP6NL-201ENST00000277575 APOBP04114 4563 aaKnown RBP5.4□□□□□ -1.55
USP6NL-201ENST00000277575 DYNC1H1Q14204 4646 aaKnown RBP5.39□□□□□ -1.55
USP6NL-201ENST00000277575 KRTAP12-1P59990 96 aa5.38□□□□□ -1.55
USP6NL-201ENST00000277575 LRP1Q07954 4544 aaKnown RBP5.37□□□□□ -1.55
USP6NL-201ENST00000277575 MYCBP2O75592 4640 aa5.35□□□□□ -1.55
USP6NL-201ENST00000277575 HSPG2P98160 4391 aa5.35□□□□□ -1.55
USP6NL-201ENST00000277575 KRTAP10-4P60372 401 aaPredicted RBP5.33□□□□□ -1.56
USP6NL-201ENST00000277575 KRTAP13-4Q3LI77 160 aa5.32□□□□□ -1.56
USP6NL-201ENST00000277575 KRTAP10-6P60371 365 aaPredicted RBP5.31□□□□□ -1.56
USP6NL-201ENST00000277575 KRTAP4-5Q9BYR2 181 aa5.3□□□□□ -1.56
USP6NL-201ENST00000277575 ABCA13Q86UQ4 5058 aa5.28□□□□□ -1.56
USP6NL-201ENST00000277575 KIAA1109Q2LD37 5005 aa5.25□□□□□ -1.57
USP6NL-201ENST00000277575 LPAP08519 4548 aa5.25□□□□□ -1.57
USP6NL-201ENST00000277575 RYR1P21817 5038 aa5.25□□□□□ -1.57
USP6NL-201ENST00000277575 KRTAP17-1Q9BYP8 105 aa5.23□□□□□ -1.57
USP6NL-201ENST00000277575 TNXBP22105 4242 aa5.21□□□□□ -1.58
USP6NL-201ENST00000277575 FAT3Q8TDW7 4589 aa5.17□□□□□ -1.58
USP6NL-201ENST00000277575 KRTAP3-3Q9BYR6 98 aa5.16□□□□□ -1.58
USP6NL-201ENST00000277575 KRTAP3-2Q9BYR7 98 aa5.14□□□□□ -1.59
USP6NL-201ENST00000277575 MUC2Q02817 5179 aa5.06□□□□□ -1.6
USP6NL-201ENST00000277575 PCLOQ9Y6V0 5065 aa5.05□□□□□ -1.6
USP6NL-201ENST00000277575 KRTAP15-1Q3LI76 137 aa5.04□□□□□ -1.6
USP6NL-201ENST00000277575 LRP2P98164 4655 aa4.98□□□□□ -1.61
USP6NL-201ENST00000277575 HERC1Q15751 4861 aa4.96□□□□□ -1.62
USP6NL-201ENST00000277575 KRTAP10-12P60413 245 aa4.93□□□□□ -1.62
USP6NL-201ENST00000277575 LORP23490 312 aaPredicted RBP4.89□□□□□ -1.63
USP6NL-201ENST00000277575 HERC2O95714 4834 aa4.83□□□□□ -1.64
USP6NL-201ENST00000277575 KRTAP4-1Q9BYQ7 146 aa4.8□□□□□ -1.64
USP6NL-201ENST00000277575 KRTAP12-3P60328 96 aa4.8□□□□□ -1.64
USP6NL-201ENST00000277575 RNF213Q63HN8 5207 aa4.77□□□□□ -1.65
USP6NL-201ENST00000277575 LCE3AQ5TA76 89 aa4.74□□□□□ -1.65
USP6NL-201ENST00000277575 CRCT1Q9UGL9 99 aa4.74□□□□□ -1.65
USP6NL-201ENST00000277575 KRTAP23-1A1A580 65 aa4.73□□□□□ -1.65
USP6NL-201ENST00000277575 FAT4Q6V0I7 4981 aa4.73□□□□□ -1.65
USP6NL-201ENST00000277575 MUC17Q685J3 4493 aa4.69□□□□□ -1.66
USP6NL-201ENST00000277575 MT1HP80294 61 aa4.68□□□□□ -1.66
USP6NL-201ENST00000277575 UBR4Q5T4S7 5183 aa4.67□□□□□ -1.66
USP6NL-201ENST00000277575 BIRC6Q9NR09 4857 aa4.66□□□□□ -1.66
USP6NL-201ENST00000277575 MT2AP02795 61 aa4.63□□□□□ -1.67
USP6NL-201ENST00000277575 HMCN2Q8NDA2 5059 aa4.62□□□□□ -1.67
USP6NL-201ENST00000277575 KRTAP8-1Q8IUC2 63 aa4.6□□□□□ -1.67
USP6NL-201ENST00000277575 SPRR2GQ9BYE4 73 aa4.57□□□□□ -1.68
USP6NL-201ENST00000277575 INE1O15225 51 aa4.54□□□□□ -1.68
USP6NL-201ENST00000277575 FLGP20930 4061 aaPredicted RBP4.54□□□□□ -1.68
USP6NL-201ENST00000277575 MT1FP04733 61 aa4.54□□□□□ -1.68
USP6NL-201ENST00000277575 KRTAP10-5P60370 271 aa4.36□□□□□ -1.71
USP6NL-201ENST00000277575 KRTAP19-1Q8IUB9 90 aa4.32□□□□□ -1.72
USP6NL-201ENST00000277575 SPRR2FQ96RM1 72 aa4.31□□□□□ -1.72
USP6NL-201ENST00000277575 KRTAP19-5Q3LI72 72 aa4.3□□□□□ -1.72
USP6NL-201ENST00000277575 KRTAP19-2Q3LHN2 52 aa4.29□□□□□ -1.72
USP6NL-201ENST00000277575 KRTAP19-8Q3LI54 63 aa4.28□□□□□ -1.72
USP6NL-201ENST00000277575 USH2AO75445 5202 aa4.21□□□□□ -1.74
USP6NL-201ENST00000277575 KRTAP10-7P60409 375 aaPredicted RBP4.2□□□□□ -1.74
USP6NL-201ENST00000277575 LCE3CQ5T5A8 94 aa4.19□□□□□ -1.74
USP6NL-201ENST00000277575 KRTAP9-8Q9BYQ0 159 aa4.18□□□□□ -1.74
USP6NL-201ENST00000277575 LCE2CQ5TA81 110 aa4.16□□□□□ -1.74
USP6NL-201ENST00000277575 MT1BP07438 61 aa4.15□□□□□ -1.74
USP6NL-201ENST00000277575 MT1XP80297 61 aa4.14□□□□□ -1.75
USP6NL-201ENST00000277575 KRTAP19-4Q3LI73 84 aa4.14□□□□□ -1.75
USP6NL-201ENST00000277575 KRTAP9-3Q9BYQ3 159 aa4.08□□□□□ -1.76
USP6NL-201ENST00000277575 KRTAP4-8A0A0G2JLE6 195 aa4.01□□□□□ -1.77
USP6NL-201ENST00000277575 KRTAP4-8Q9BYQ9 185 aa4.01□□□□□ -1.77
USP6NL-201ENST00000277575 SPRR2EP22531 72 aa4□□□□□ -1.77
USP6NL-201ENST00000277575 SPRR2BP35325 72 aa4□□□□□ -1.77
USP6NL-201ENST00000277575 SPRR2AP35326 72 aa4□□□□□ -1.77
USP6NL-201ENST00000277575 KMT2DO14686 5537 aa3.97□□□□□ -1.77
USP6NL-201ENST00000277575 SYNE1Q8NF91 8797 aaKnown RBP3.95□□□□□ -1.78
USP6NL-201ENST00000277575 LCE2BO14633 110 aa3.91□□□□□ -1.78
USP6NL-201ENST00000277575 MT1GP13640 62 aa3.91□□□□□ -1.78
USP6NL-201ENST00000277575 FSIP2Q5CZC0 6907 aa3.91□□□□□ -1.78
USP6NL-201ENST00000277575 SPRR2DP22532 72 aa3.86□□□□□ -1.79
USP6NL-201ENST00000277575 LCE3BQ5TA77 95 aa3.86□□□□□ -1.79
USP6NL-201ENST00000277575 SPRR5A0A1B0GTR4 108 aa3.8□□□□□ -1.8
USP6NL-201ENST00000277575 KRTAP12-4P60329 112 aa3.78□□□□□ -1.8
USP6NL-201ENST00000277575 KRTAP19-3Q7Z4W3 81 aa3.78□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms