RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 KRTAP9-8Q9BYQ0 159 aa7.98□□□□□ -1.13
CHCHD3-201ENST00000262570 LCA10Q71F78 164 aa7.97□□□□□ -1.13
CHCHD3-201ENST00000262570 DMAC1Q96GE9 116 aa7.93□□□□□ -1.14
CHCHD3-201ENST00000262570 NDUFC1O43677 76 aa7.92□□□□□ -1.14
CHCHD3-201ENST00000262570 CYSTM1Q9H1C7 97 aa7.92□□□□□ -1.14
CHCHD3-201ENST00000262570 MT2AP02795 61 aa7.9□□□□□ -1.14
CHCHD3-201ENST00000262570 CSAG1Q6PB30 78 aa7.9□□□□□ -1.14
CHCHD3-201ENST00000262570 SPANXA2-OT1Q8N9U9 137 aa7.86□□□□□ -1.15
CHCHD3-201ENST00000262570 LOC100996750A0A140TA64 210 aa7.85□□□□□ -1.15
CHCHD3-201ENST00000262570 RPS28P62857 69 aaKnown RBP7.85□□□□□ -1.15
CHCHD3-201ENST00000262570 KRTAP4-6Q9BYQ5 205 aa7.85□□□□□ -1.15
CHCHD3-201ENST00000262570 H7BZZ5 65 aa7.84□□□□□ -1.15
CHCHD3-201ENST00000262570 MT1FP04733 61 aa7.84□□□□□ -1.15
CHCHD3-201ENST00000262570 ATP5EP56381 51 aaPredicted RBP7.83□□□□□ -1.16
CHCHD3-201ENST00000262570 ACYP2P14621 99 aa7.82□□□□□ -1.16
CHCHD3-201ENST00000262570 KRTAP10-10P60014 251 aa7.8□□□□□ -1.16
CHCHD3-201ENST00000262570 KRTAP9-2Q9BYQ4 174 aa7.77□□□□□ -1.17
CHCHD3-201ENST00000262570 SERP1Q9Y6X1 66 aa7.75□□□□□ -1.17
CHCHD3-201ENST00000262570 KRTAP9-3Q9BYQ3 159 aa7.71□□□□□ -1.17
CHCHD3-201ENST00000262570 H0YAA0 97 aa7.67□□□□□ -1.18
CHCHD3-201ENST00000262570 CHKB-CPT1BH3BT56 60 aa7.66□□□□□ -1.18
CHCHD3-201ENST00000262570 SPTSSBQ8NFR3 76 aa7.63□□□□□ -1.19
CHCHD3-201ENST00000262570 COA5Q86WW8 74 aa7.6□□□□□ -1.19
CHCHD3-201ENST00000262570 SMIM26A0A096LP01 95 aa7.59□□□□□ -1.2
CHCHD3-201ENST00000262570 LCE2BO14633 110 aa7.59□□□□□ -1.2
CHCHD3-201ENST00000262570 ADM2Q7Z4H4 148 aa7.59□□□□□ -1.2
CHCHD3-201ENST00000262570 FSIP2Q5CZC0 6907 aa7.58□□□□□ -1.2
CHCHD3-201ENST00000262570 USH2AO75445 5202 aa7.57□□□□□ -1.2
CHCHD3-201ENST00000262570 KRTAP19-1Q8IUB9 90 aa7.53□□□□□ -1.2
CHCHD3-201ENST00000262570 CRIPTQ9P021 101 aa7.52□□□□□ -1.21
CHCHD3-201ENST00000262570 SPRR2GQ9BYE4 73 aa7.5□□□□□ -1.21
CHCHD3-201ENST00000262570 P0C880 135 aa7.49□□□□□ -1.21
CHCHD3-201ENST00000262570 SSPOA2VEC9 5147 aa7.44□□□□□ -1.22
CHCHD3-201ENST00000262570 CRCT1Q9UGL9 99 aa7.42□□□□□ -1.22
CHCHD3-201ENST00000262570 KRTAP19-8Q3LI54 63 aa7.37□□□□□ -1.23
CHCHD3-201ENST00000262570 R4GN34 69 aa7.37□□□□□ -1.23
CHCHD3-201ENST00000262570 KRTAP9-6A0A140TA67 174 aa7.36□□□□□ -1.23
CHCHD3-201ENST00000262570 V9GYY9 64 aa7.36□□□□□ -1.23
CHCHD3-201ENST00000262570 Q1T7F1 81 aa7.35□□□□□ -1.23
CHCHD3-201ENST00000262570 M0QZ58 72 aa7.32□□□□□ -1.24
CHCHD3-201ENST00000262570 MT1BP07438 61 aa7.32□□□□□ -1.24
CHCHD3-201ENST00000262570 Q5VV11 94 aa7.32□□□□□ -1.24
CHCHD3-201ENST00000262570 SEC61GP60059 68 aa7.29□□□□□ -1.24
CHCHD3-201ENST00000262570 SVIPQ8NHG7 77 aa7.26□□□□□ -1.25
CHCHD3-201ENST00000262570 KRTAP19-6Q3LI70 58 aa7.25□□□□□ -1.25
CHCHD3-201ENST00000262570 A0A1B0GU69 56 aa7.2□□□□□ -1.26
CHCHD3-201ENST00000262570 LINC01554Q52M75 96 aa7.18□□□□□ -1.26
CHCHD3-201ENST00000262570 KRTAP13-4Q3LI77 160 aa7.17□□□□□ -1.26
CHCHD3-201ENST00000262570 PSPHP1O15172 72 aa7.16□□□□□ -1.26
CHCHD3-201ENST00000262570 LINC01558Q9Y6Z2 57 aa7.16□□□□□ -1.26
CHCHD3-201ENST00000262570 FCGBPQ9Y6R7 5405 aaPredicted RBP7.16□□□□□ -1.26
CHCHD3-201ENST00000262570 A0A1B0GU33 70 aa7.15□□□□□ -1.27
CHCHD3-201ENST00000262570 PRO0628Q9UI54 55 aa7.15□□□□□ -1.27
CHCHD3-201ENST00000262570 PRR15LQ9BU68 103 aa7.14□□□□□ -1.27
CHCHD3-201ENST00000262570 BRK1Q8WUW1 75 aa7.12□□□□□ -1.27
CHCHD3-201ENST00000262570 PLAC4Q8WY50 150 aa7.12□□□□□ -1.27
CHCHD3-201ENST00000262570 SPATA8Q6RVD6 105 aa7.07□□□□□ -1.28
CHCHD3-201ENST00000262570 A6NN06 94 aa7.06□□□□□ -1.28
CHCHD3-201ENST00000262570 KRTAP10-5P60370 271 aa7.05□□□□□ -1.28
CHCHD3-201ENST00000262570 A6NED7 52 aa6.99□□□□□ -1.29
CHCHD3-201ENST00000262570 A0A0D9SG42 100 aa6.98□□□□□ -1.29
CHCHD3-201ENST00000262570 MT1XP80297 61 aa6.97□□□□□ -1.29
CHCHD3-201ENST00000262570 PRO2289Q9P1D8 64 aa6.95□□□□□ -1.3
CHCHD3-201ENST00000262570 KRTAP4-8Q9BYQ9 185 aa6.94□□□□□ -1.3
CHCHD3-201ENST00000262570 CDC42SE1Q9NRR8 79 aa6.91□□□□□ -1.3
CHCHD3-201ENST00000262570 UQCR11O14957 56 aa6.9□□□□□ -1.31
CHCHD3-201ENST00000262570 A8MU10 97 aa6.89□□□□□ -1.31
CHCHD3-201ENST00000262570 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.89□□□□□ -1.31
CHCHD3-201ENST00000262570 KRTAP12-1P59990 96 aa6.87□□□□□ -1.31
CHCHD3-201ENST00000262570 MACF1Q9UPN3 7388 aaKnown RBP6.86□□□□□ -1.31
CHCHD3-201ENST00000262570 SPINT4Q6UDR6 99 aa6.86□□□□□ -1.31
CHCHD3-201ENST00000262570 KRTAP12-2P59991 146 aa6.82□□□□□ -1.32
CHCHD3-201ENST00000262570 CAMK2N1Q7Z7J9 78 aa6.82□□□□□ -1.32
CHCHD3-201ENST00000262570 MIR22HGQ0VDD5 57 aa6.78□□□□□ -1.32
CHCHD3-201ENST00000262570 PMAIP1Q13794 54 aa6.74□□□□□ -1.33
CHCHD3-201ENST00000262570 SYNE2Q8WXH0 6885 aaKnown RBP6.72□□□□□ -1.33
CHCHD3-201ENST00000262570 KRTAP9-7A8MTY7 169 aa6.67□□□□□ -1.34
CHCHD3-201ENST00000262570 KRTAP10-7P60409 375 aaPredicted RBP6.66□□□□□ -1.34
CHCHD3-201ENST00000262570 KMT2DO14686 5537 aa6.63□□□□□ -1.35
CHCHD3-201ENST00000262570 KRTAP10-12P60413 245 aa6.62□□□□□ -1.35
CHCHD3-201ENST00000262570 KRTAP6-3Q3LI67 103 aa6.59□□□□□ -1.35
CHCHD3-201ENST00000262570 KTN1-AS1Q86SY8 53 aa6.58□□□□□ -1.36
CHCHD3-201ENST00000262570 LCE3BQ5TA77 95 aa6.56□□□□□ -1.36
CHCHD3-201ENST00000262570 K7ERS5 55 aa6.54□□□□□ -1.36
CHCHD3-201ENST00000262570 KRTAP4-8A0A0G2JLE6 195 aa6.53□□□□□ -1.36
CHCHD3-201ENST00000262570 C10orf95Q9H7T3 257 aa6.53□□□□□ -1.36
CHCHD3-201ENST00000262570 KRTAP8-1Q8IUC2 63 aa6.48□□□□□ -1.37
CHCHD3-201ENST00000262570 KRTAP9-9Q9BYP9 154 aa6.48□□□□□ -1.37
CHCHD3-201ENST00000262570 KRTAP9-4Q9BYQ2 154 aa6.48□□□□□ -1.37
CHCHD3-201ENST00000262570 KRTAP5-9P26371 169 aa6.48□□□□□ -1.37
CHCHD3-201ENST00000262570 MUC12Q9UKN1 5478 aa6.42□□□□□ -1.38
CHCHD3-201ENST00000262570 TNP1P09430 55 aa6.41□□□□□ -1.38
CHCHD3-201ENST00000262570 SPRR2FQ96RM1 72 aa6.37□□□□□ -1.39
CHCHD3-201ENST00000262570 KRTAP4-12Q9BQ66 201 aa6.35□□□□□ -1.39
CHCHD3-201ENST00000262570 H3BS24 57 aa6.34□□□□□ -1.39
CHCHD3-201ENST00000262570 KRTAP4-7Q9BYR0 210 aa6.34□□□□□ -1.39
CHCHD3-201ENST00000262570 MDN1Q9NU22 5596 aa6.3□□□□□ -1.4
CHCHD3-201ENST00000262570 KRTAP25-1Q3LHN0 102 aa6.27□□□□□ -1.41
CHCHD3-201ENST00000262570 PRAC1Q96KF2 57 aa6.25□□□□□ -1.41
CHCHD3-201ENST00000262570 LCE3AQ5TA76 89 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms