RNA–Protein interactions for RNA: ENST00000262197.7

RBFA-201, Transcript of ribosome binding factor A, humanhuman

TSL 1 (best) BASIC

Gene RBFA, Length 1,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFA-201ENST00000262197 DMAC1Q96GE9 116 aa11.36□□□□□ -0.59
RBFA-201ENST00000262197 NDUFC1O43677 76 aa11.35□□□□□ -0.59
RBFA-201ENST00000262197 COX7CP15954 63 aa11.34□□□□□ -0.59
RBFA-201ENST00000262197 MT1FP04733 61 aa11.32□□□□□ -0.6
RBFA-201ENST00000262197 KRTAP3-3Q9BYR6 98 aa11.3□□□□□ -0.6
RBFA-201ENST00000262197 ANAPC13Q9BS18 74 aa11.26□□□□□ -0.61
RBFA-201ENST00000262197 ACYP2P14621 99 aa11.25□□□□□ -0.61
RBFA-201ENST00000262197 SPANXA2-OT1Q8N9U9 137 aa11.22□□□□□ -0.61
RBFA-201ENST00000262197 KRTAP9-3Q9BYQ3 159 aa11.13□□□□□ -0.63
RBFA-201ENST00000262197 CHKB-CPT1BH3BT56 60 aa11.08□□□□□ -0.64
RBFA-201ENST00000262197 CRCT1Q9UGL9 99 aa11.07□□□□□ -0.64
RBFA-201ENST00000262197 SPTSSBQ8NFR3 76 aa11.06□□□□□ -0.64
RBFA-201ENST00000262197 H0YAA0 97 aa11.05□□□□□ -0.64
RBFA-201ENST00000262197 FSIP2Q5CZC0 6907 aa11.02□□□□□ -0.64
RBFA-201ENST00000262197 H7BZZ5 65 aa11□□□□□ -0.65
RBFA-201ENST00000262197 CYSTM1Q9H1C7 97 aa10.97□□□□□ -0.65
RBFA-201ENST00000262197 ADM2Q7Z4H4 148 aa10.96□□□□□ -0.65
RBFA-201ENST00000262197 CCDC179H3BU77 68 aa10.94□□□□□ -0.66
RBFA-201ENST00000262197 LCE2BO14633 110 aa10.94□□□□□ -0.66
RBFA-201ENST00000262197 CRIPTQ9P021 101 aa10.92□□□□□ -0.66
RBFA-201ENST00000262197 COA5Q86WW8 74 aa10.86□□□□□ -0.67
RBFA-201ENST00000262197 KRTAP19-1Q8IUB9 90 aa10.8□□□□□ -0.68
RBFA-201ENST00000262197 SPRR2GQ9BYE4 73 aa10.8□□□□□ -0.68
RBFA-201ENST00000262197 USH2AO75445 5202 aa10.78□□□□□ -0.68
RBFA-201ENST00000262197 ATP5EP56381 51 aaPredicted RBP10.75□□□□□ -0.69
RBFA-201ENST00000262197 P0C880 135 aa10.72□□□□□ -0.69
RBFA-201ENST00000262197 KRTAP3-2Q9BYR7 98 aa10.69□□□□□ -0.7
RBFA-201ENST00000262197 R4GN34 69 aa10.68□□□□□ -0.7
RBFA-201ENST00000262197 Q5VV11 94 aa10.67□□□□□ -0.7
RBFA-201ENST00000262197 TMEM258P61165 79 aa10.63□□□□□ -0.71
RBFA-201ENST00000262197 KRTAP19-8Q3LI54 63 aa10.63□□□□□ -0.71
RBFA-201ENST00000262197 M0QZ58 72 aa10.59□□□□□ -0.71
RBFA-201ENST00000262197 SEC61GP60059 68 aa10.58□□□□□ -0.72
RBFA-201ENST00000262197 SSPOA2VEC9 5147 aa10.57□□□□□ -0.72
RBFA-201ENST00000262197 MT1BP07438 61 aa10.52□□□□□ -0.73
RBFA-201ENST00000262197 SERP1Q9Y6X1 66 aa10.52□□□□□ -0.73
RBFA-201ENST00000262197 KRTAP19-6Q3LI70 58 aa10.51□□□□□ -0.73
RBFA-201ENST00000262197 LINC01554Q52M75 96 aa10.42□□□□□ -0.74
RBFA-201ENST00000262197 PLAC4Q8WY50 150 aa10.38□□□□□ -0.75
RBFA-201ENST00000262197 KRTAP9-7A8MTY7 169 aa10.36□□□□□ -0.75
RBFA-201ENST00000262197 A0A1B0GU69 56 aa10.34□□□□□ -0.75
RBFA-201ENST00000262197 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.31□□□□□ -0.76
RBFA-201ENST00000262197 PCP4P48539 62 aa10.31□□□□□ -0.76
RBFA-201ENST00000262197 A6NN06 94 aa10.3□□□□□ -0.76
RBFA-201ENST00000262197 FCGBPQ9Y6R7 5405 aaPredicted RBP10.28□□□□□ -0.76
RBFA-201ENST00000262197 A0A1B0GU33 70 aa10.26□□□□□ -0.77
RBFA-201ENST00000262197 PRR15LQ9BU68 103 aa10.25□□□□□ -0.77
RBFA-201ENST00000262197 KRTAP10-5P60370 271 aa10.21□□□□□ -0.77
RBFA-201ENST00000262197 KRTAP13-4Q3LI77 160 aa10.2□□□□□ -0.78
RBFA-201ENST00000262197 LINC01558Q9Y6Z2 57 aa10.18□□□□□ -0.78
RBFA-201ENST00000262197 PRO2289Q9P1D8 64 aa10.16□□□□□ -0.78
RBFA-201ENST00000262197 SPATA8Q6RVD6 105 aa10.1□□□□□ -0.79
RBFA-201ENST00000262197 A0A0D9SG42 100 aa10.05□□□□□ -0.8
RBFA-201ENST00000262197 SMIM26A0A096LP01 95 aa10.01□□□□□ -0.81
RBFA-201ENST00000262197 MT1XP80297 61 aa10.01□□□□□ -0.81
RBFA-201ENST00000262197 V9GYY9 64 aa10.01□□□□□ -0.81
RBFA-201ENST00000262197 CAMK2N1Q7Z7J9 78 aa9.92□□□□□ -0.82
RBFA-201ENST00000262197 MACF1Q9UPN3 7388 aaKnown RBP9.91□□□□□ -0.82
RBFA-201ENST00000262197 Q1T7F1 81 aa9.89□□□□□ -0.83
RBFA-201ENST00000262197 SPINT4Q6UDR6 99 aa9.89□□□□□ -0.83
RBFA-201ENST00000262197 UQCR11O14957 56 aa9.88□□□□□ -0.83
RBFA-201ENST00000262197 RPS28P62857 69 aaKnown RBP9.88□□□□□ -0.83
RBFA-201ENST00000262197 A8MU10 97 aa9.82□□□□□ -0.84
RBFA-201ENST00000262197 KRTAP12-1P59990 96 aa9.81□□□□□ -0.84
RBFA-201ENST00000262197 PSPHP1O15172 72 aa9.79□□□□□ -0.84
RBFA-201ENST00000262197 KRTAP12-2P59991 146 aa9.74□□□□□ -0.85
RBFA-201ENST00000262197 SYNE2Q8WXH0 6885 aaKnown RBP9.7□□□□□ -0.86
RBFA-201ENST00000262197 MIR22HGQ0VDD5 57 aa9.69□□□□□ -0.86
RBFA-201ENST00000262197 KRTAP6-3Q3LI67 103 aa9.64□□□□□ -0.87
RBFA-201ENST00000262197 KRTAP10-7P60409 375 aaPredicted RBP9.57□□□□□ -0.88
RBFA-201ENST00000262197 A6NED7 52 aa9.54□□□□□ -0.88
RBFA-201ENST00000262197 KRTAP10-12P60413 245 aa9.53□□□□□ -0.88
RBFA-201ENST00000262197 K7ERS5 55 aa9.49□□□□□ -0.89
RBFA-201ENST00000262197 KRTAP8-1Q8IUC2 63 aa9.46□□□□□ -0.9
RBFA-201ENST00000262197 KMT2DO14686 5537 aa9.43□□□□□ -0.9
RBFA-201ENST00000262197 KRTAP5-9P26371 169 aa9.4□□□□□ -0.9
RBFA-201ENST00000262197 KRTAP4-8A0A0G2JLE6 195 aa9.38□□□□□ -0.91
RBFA-201ENST00000262197 KRTAP4-8Q9BYQ9 185 aa9.38□□□□□ -0.91
RBFA-201ENST00000262197 C10orf95Q9H7T3 257 aa9.32□□□□□ -0.92
RBFA-201ENST00000262197 SPRR2FQ96RM1 72 aa9.31□□□□□ -0.92
RBFA-201ENST00000262197 TNP1P09430 55 aa9.29□□□□□ -0.92
RBFA-201ENST00000262197 CDC42SE1Q9NRR8 79 aa9.2□□□□□ -0.94
RBFA-201ENST00000262197 MUC12Q9UKN1 5478 aa9.16□□□□□ -0.94
RBFA-201ENST00000262197 NEBP20929 6669 aa9.1□□□□□ -0.95
RBFA-201ENST00000262197 SPRR2EP22531 72 aa9.04□□□□□ -0.96
RBFA-201ENST00000262197 SPRR2BP35325 72 aa9.04□□□□□ -0.96
RBFA-201ENST00000262197 SPRR2AP35326 72 aa9.04□□□□□ -0.96
RBFA-201ENST00000262197 KRTAP20-1Q3LI63 56 aa9.03□□□□□ -0.96
RBFA-201ENST00000262197 KRTAP25-1Q3LHN0 102 aa9.02□□□□□ -0.97
RBFA-201ENST00000262197 MDN1Q9NU22 5596 aa8.97□□□□□ -0.97
RBFA-201ENST00000262197 LCE3AQ5TA76 89 aa8.96□□□□□ -0.98
RBFA-201ENST00000262197 LCE1AQ5T7P2 110 aa8.94□□□□□ -0.98
RBFA-201ENST00000262197 KRTAP19-7Q3SYF9 63 aa8.93□□□□□ -0.98
RBFA-201ENST00000262197 KRTAP19-5Q3LI72 72 aa8.89□□□□□ -0.99
RBFA-201ENST00000262197 ROMO1P60602 79 aa8.87□□□□□ -0.99
RBFA-201ENST00000262197 MT1EP04732 61 aa8.85□□□□□ -0.99
RBFA-201ENST00000262197 BRK1Q8WUW1 75 aa8.8□□□□□ -1
RBFA-201ENST00000262197 SPRR2DP22532 72 aa8.74□□□□□ -1.01
RBFA-201ENST00000262197 KRTAP23-1A1A580 65 aa8.71□□□□□ -1.02
RBFA-201ENST00000262197 KRTAP19-3Q7Z4W3 81 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms