RNA–Protein interactions for RNA: ENST00000262043.7

PHF3-201, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHF3, Length 8,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-201ENST00000262043 DNAH2Q9P225 4427 aa4.53□□□□□ -1.68
PHF3-201ENST00000262043 KRTAP4-5Q9BYR2 181 aa4.53□□□□□ -1.68
PHF3-201ENST00000262043 DNAH1Q9P2D7 4330 aa4.51□□□□□ -1.69
PHF3-201ENST00000262043 ANK2Q01484 3957 aa4.51□□□□□ -1.69
PHF3-201ENST00000262043 CMYA5Q8N3K9 4069 aa4.5□□□□□ -1.69
PHF3-201ENST00000262043 LYSTQ99698 3801 aa4.5□□□□□ -1.69
PHF3-201ENST00000262043 INE1O15225 51 aa4.5□□□□□ -1.69
PHF3-201ENST00000262043 DNAH9Q9NYC9 4486 aa4.49□□□□□ -1.69
PHF3-201ENST00000262043 KRTAP10-4P60372 401 aaPredicted RBP4.47□□□□□ -1.69
PHF3-201ENST00000262043 VPS13BQ7Z7G8 4022 aa4.46□□□□□ -1.7
PHF3-201ENST00000262043 DNAH10Q8IVF4 4471 aa4.45□□□□□ -1.7
PHF3-201ENST00000262043 KRTAP12-3P60328 96 aa4.43□□□□□ -1.7
PHF3-201ENST00000262043 DNAH7Q8WXX0 4024 aa4.43□□□□□ -1.7
PHF3-201ENST00000262043 LCE3AQ5TA76 89 aa4.42□□□□□ -1.7
PHF3-201ENST00000262043 LORP23490 312 aaPredicted RBP4.36□□□□□ -1.71
PHF3-201ENST00000262043 HECTD4Q9Y4D8 3996 aa4.36□□□□□ -1.71
PHF3-201ENST00000262043 KRTAP23-1A1A580 65 aa4.33□□□□□ -1.72
PHF3-201ENST00000262043 PRKDCP78527 4128 aaKnown RBP4.28□□□□□ -1.72
PHF3-201ENST00000262043 FAT2Q9NYQ8 4349 aa4.27□□□□□ -1.73
PHF3-201ENST00000262043 PLECQ15149 4684 aaKnown RBP4.25□□□□□ -1.73
PHF3-201ENST00000262043 KRTAP8-1Q8IUC2 63 aa4.23□□□□□ -1.73
PHF3-201ENST00000262043 DNAH6Q9C0G6 4158 aa4.21□□□□□ -1.74
PHF3-201ENST00000262043 KRTAP10-5P60370 271 aa4.21□□□□□ -1.74
PHF3-201ENST00000262043 VPS13DQ5THJ4 4388 aa4.2□□□□□ -1.74
PHF3-201ENST00000262043 DYNC2H1Q8NCM8 4307 aaKnown RBP4.2□□□□□ -1.74
PHF3-201ENST00000262043 DNAH11Q96DT5 4516 aa4.2□□□□□ -1.74
PHF3-201ENST00000262043 DNAH8Q96JB1 4490 aa4.2□□□□□ -1.74
PHF3-201ENST00000262043 STARD9Q9P2P6 4700 aa4.19□□□□□ -1.74
PHF3-201ENST00000262043 KRTAP4-1Q9BYQ7 146 aa4.13□□□□□ -1.75
PHF3-201ENST00000262043 DNAH17Q9UFH2 4485 aa4.13□□□□□ -1.75
PHF3-201ENST00000262043 DNAH5Q8TE73 4624 aa4.12□□□□□ -1.75
PHF3-201ENST00000262043 MT1HP80294 61 aa4.1□□□□□ -1.75
PHF3-201ENST00000262043 LRP1BQ9NZR2 4599 aa4.05□□□□□ -1.76
PHF3-201ENST00000262043 SPRR2GQ9BYE4 73 aa4.01□□□□□ -1.77
PHF3-201ENST00000262043 MT2AP02795 61 aa3.99□□□□□ -1.77
PHF3-201ENST00000262043 KRTAP19-5Q3LI72 72 aa3.95□□□□□ -1.78
PHF3-201ENST00000262043 MT1FP04733 61 aa3.93□□□□□ -1.78
PHF3-201ENST00000262043 SPRR2FQ96RM1 72 aa3.92□□□□□ -1.78
PHF3-201ENST00000262043 KRTAP10-7P60409 375 aaPredicted RBP3.91□□□□□ -1.78
PHF3-201ENST00000262043 PKHD1P08F94 4074 aa3.91□□□□□ -1.78
PHF3-201ENST00000262043 LCE3CQ5T5A8 94 aa3.9□□□□□ -1.79
PHF3-201ENST00000262043 FAT1Q14517 4588 aa3.88□□□□□ -1.79
PHF3-201ENST00000262043 APOBP04114 4563 aaKnown RBP3.82□□□□□ -1.8
PHF3-201ENST00000262043 SACSQ9NZJ4 4579 aa3.81□□□□□ -1.8
PHF3-201ENST00000262043 FLGP20930 4061 aaPredicted RBP3.8□□□□□ -1.8
PHF3-201ENST00000262043 PKHD1L1Q86WI1 4243 aa3.78□□□□□ -1.8
PHF3-201ENST00000262043 PKD1P98161 4303 aa3.78□□□□□ -1.8
PHF3-201ENST00000262043 DYNC1H1Q14204 4646 aaKnown RBP3.77□□□□□ -1.81
PHF3-201ENST00000262043 FAT3Q8TDW7 4589 aa3.74□□□□□ -1.81
PHF3-201ENST00000262043 HSPG2P98160 4391 aa3.72□□□□□ -1.81
PHF3-201ENST00000262043 TNXBP22105 4242 aa3.71□□□□□ -1.81
PHF3-201ENST00000262043 MYCBP2O75592 4640 aa3.7□□□□□ -1.82
PHF3-201ENST00000262043 SPRR2EP22531 72 aa3.69□□□□□ -1.82
PHF3-201ENST00000262043 SPRR2BP35325 72 aa3.69□□□□□ -1.82
PHF3-201ENST00000262043 SPRR2AP35326 72 aa3.69□□□□□ -1.82
PHF3-201ENST00000262043 LRP1Q07954 4544 aaKnown RBP3.68□□□□□ -1.82
PHF3-201ENST00000262043 LCE3BQ5TA77 95 aa3.68□□□□□ -1.82
PHF3-201ENST00000262043 DNHD1Q96M86 4753 aa3.67□□□□□ -1.82
PHF3-201ENST00000262043 KRTAP19-1Q8IUB9 90 aa3.67□□□□□ -1.82
PHF3-201ENST00000262043 LPAP08519 4548 aa3.67□□□□□ -1.82
PHF3-201ENST00000262043 KRTAP19-4Q3LI73 84 aa3.65□□□□□ -1.83
PHF3-201ENST00000262043 KRTAP19-8Q3LI54 63 aa3.64□□□□□ -1.83
PHF3-201ENST00000262043 MT1XP80297 61 aa3.64□□□□□ -1.83
PHF3-201ENST00000262043 KRTAP17-1Q9BYP8 105 aa3.63□□□□□ -1.83
PHF3-201ENST00000262043 MT1GP13640 62 aa3.6□□□□□ -1.83
PHF3-201ENST00000262043 SPRR2DP22532 72 aa3.56□□□□□ -1.84
PHF3-201ENST00000262043 LCE2BO14633 110 aa3.56□□□□□ -1.84
PHF3-201ENST00000262043 RYR1P21817 5038 aa3.55□□□□□ -1.84
PHF3-201ENST00000262043 KRTAP9-8Q9BYQ0 159 aa3.55□□□□□ -1.84
PHF3-201ENST00000262043 KRTAP4-8A0A0G2JLE6 195 aa3.54□□□□□ -1.84
PHF3-201ENST00000262043 KRTAP4-8Q9BYQ9 185 aa3.54□□□□□ -1.84
PHF3-201ENST00000262043 KRTAP12-4P60329 112 aa3.54□□□□□ -1.84
PHF3-201ENST00000262043 MT1BP07438 61 aa3.53□□□□□ -1.84
PHF3-201ENST00000262043 LRP2P98164 4655 aa3.45□□□□□ -1.86
PHF3-201ENST00000262043 KRTAP9-3Q9BYQ3 159 aa3.44□□□□□ -1.86
PHF3-201ENST00000262043 LCE2CQ5TA81 110 aa3.42□□□□□ -1.86
PHF3-201ENST00000262043 RYR3Q15413 4870 aa3.41□□□□□ -1.86
PHF3-201ENST00000262043 LCE3DQ9BYE3 92 aa3.41□□□□□ -1.86
PHF3-201ENST00000262043 SPRR5A0A1B0GTR4 108 aa3.39□□□□□ -1.87
PHF3-201ENST00000262043 HYDINQ4G0P3 5121 aa3.37□□□□□ -1.87
PHF3-201ENST00000262043 KRTAP4-7Q9BYR0 210 aa3.34□□□□□ -1.88
PHF3-201ENST00000262043 KRTAP19-3Q7Z4W3 81 aa3.33□□□□□ -1.88
PHF3-201ENST00000262043 LCE3EQ5T5B0 92 aa3.32□□□□□ -1.88
PHF3-201ENST00000262043 MT1LQ93083 61 aa3.29□□□□□ -1.88
PHF3-201ENST00000262043 MT1EP04732 61 aa3.26□□□□□ -1.89
PHF3-201ENST00000262043 LCE2DQ5TA82 110 aaPredicted RBP3.25□□□□□ -1.89
PHF3-201ENST00000262043 MUC17Q685J3 4493 aa3.22□□□□□ -1.89
PHF3-201ENST00000262043 KRTAP19-2Q3LHN2 52 aa3.21□□□□□ -1.9
PHF3-201ENST00000262043 MT4P47944 62 aa3.2□□□□□ -1.9
PHF3-201ENST00000262043 LOC100996750A0A140TA64 210 aa3.2□□□□□ -1.9
PHF3-201ENST00000262043 KMT2CQ8NEZ4 4911 aaKnown RBP3.17□□□□□ -1.9
PHF3-201ENST00000262043 MT1MQ8N339 61 aa3.17□□□□□ -1.9
PHF3-201ENST00000262043 PRM1P04553 51 aa3.14□□□□□ -1.91
PHF3-201ENST00000262043 RYR2Q92736 4967 aa3.14□□□□□ -1.91
PHF3-201ENST00000262043 KRTAP4-3Q9BYR4 195 aa3.14□□□□□ -1.91
PHF3-201ENST00000262043 MT3P25713 68 aa3.11□□□□□ -1.91
PHF3-201ENST00000262043 KRTAP19-6Q3LI70 58 aa3.09□□□□□ -1.91
PHF3-201ENST00000262043 KRTAP9-2Q9BYQ4 174 aa3.09□□□□□ -1.92
PHF3-201ENST00000262043 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
PHF3-201ENST00000262043 LCE1DQ5T752 114 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms