RNA–Protein interactions for RNA: ENST00000261900.7

CCNT1-201, Transcript of cyclin T1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNT1, Length 6,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-201ENST00000261900 SPRR2FQ96RM1 72 aa3.52□□□□□ -1.85
CCNT1-201ENST00000261900 KRTAP3-2Q9BYR7 98 aa3.51□□□□□ -1.85
CCNT1-201ENST00000261900 ANK3Q12955 4377 aaKnown RBP3.51□□□□□ -1.85
CCNT1-201ENST00000261900 KRTAP3-3Q9BYR6 98 aa3.5□□□□□ -1.85
CCNT1-201ENST00000261900 MT1HP80294 61 aa3.42□□□□□ -1.86
CCNT1-201ENST00000261900 MT2AP02795 61 aa3.37□□□□□ -1.87
CCNT1-201ENST00000261900 SPRR2EP22531 72 aa3.34□□□□□ -1.87
CCNT1-201ENST00000261900 SPRR2BP35325 72 aa3.34□□□□□ -1.87
CCNT1-201ENST00000261900 SPRR2AP35326 72 aa3.34□□□□□ -1.87
CCNT1-201ENST00000261900 ANK2Q01484 3957 aa3.32□□□□□ -1.88
CCNT1-201ENST00000261900 TRRAPQ9Y4A5 3859 aa3.28□□□□□ -1.88
CCNT1-201ENST00000261900 CSMD3Q7Z407 3707 aa3.28□□□□□ -1.88
CCNT1-201ENST00000261900 SPRR2GQ9BYE4 73 aa3.27□□□□□ -1.89
CCNT1-201ENST00000261900 KRTAP4-1Q9BYQ7 146 aa3.27□□□□□ -1.89
CCNT1-201ENST00000261900 KRTAP19-4Q3LI73 84 aa3.26□□□□□ -1.89
CCNT1-201ENST00000261900 PLECQ15149 4684 aaKnown RBP3.25□□□□□ -1.89
CCNT1-201ENST00000261900 MT1FP04733 61 aa3.25□□□□□ -1.89
CCNT1-201ENST00000261900 SPRR2DP22532 72 aa3.25□□□□□ -1.89
CCNT1-201ENST00000261900 KRTAP12-4P60329 112 aa3.22□□□□□ -1.89
CCNT1-201ENST00000261900 HUWE1Q7Z6Z7 4374 aaKnown RBP3.22□□□□□ -1.89
CCNT1-201ENST00000261900 KRTAP19-5Q3LI72 72 aa3.21□□□□□ -1.9
CCNT1-201ENST00000261900 LCE2BO14633 110 aa3.2□□□□□ -1.9
CCNT1-201ENST00000261900 ALMS1Q8TCU4 4167 aa3.19□□□□□ -1.9
CCNT1-201ENST00000261900 DNHD1Q96M86 4753 aa3.16□□□□□ -1.9
CCNT1-201ENST00000261900 FAT1Q14517 4588 aa3.16□□□□□ -1.9
CCNT1-201ENST00000261900 DNAH9Q9NYC9 4486 aa3.16□□□□□ -1.9
CCNT1-201ENST00000261900 LCE3CQ5T5A8 94 aa3.13□□□□□ -1.91
CCNT1-201ENST00000261900 DNAH11Q96DT5 4516 aa3.12□□□□□ -1.91
CCNT1-201ENST00000261900 LYSTQ99698 3801 aa3.12□□□□□ -1.91
CCNT1-201ENST00000261900 DNAH10Q8IVF4 4471 aa3.11□□□□□ -1.91
CCNT1-201ENST00000261900 DNAH5Q8TE73 4624 aa3.11□□□□□ -1.91
CCNT1-201ENST00000261900 CMYA5Q8N3K9 4069 aa3.08□□□□□ -1.92
CCNT1-201ENST00000261900 FAT3Q8TDW7 4589 aa3.08□□□□□ -1.92
CCNT1-201ENST00000261900 DNAH1Q9P2D7 4330 aa3.07□□□□□ -1.92
CCNT1-201ENST00000261900 RYR1P21817 5038 aa3.07□□□□□ -1.92
CCNT1-201ENST00000261900 DYNC1H1Q14204 4646 aaKnown RBP3.06□□□□□ -1.92
CCNT1-201ENST00000261900 VPS13DQ5THJ4 4388 aa3.06□□□□□ -1.92
CCNT1-201ENST00000261900 LCE2CQ5TA81 110 aa3.04□□□□□ -1.92
CCNT1-201ENST00000261900 DNAH17Q9UFH2 4485 aa3.04□□□□□ -1.92
CCNT1-201ENST00000261900 RYR2Q92736 4967 aa3.03□□□□□ -1.92
CCNT1-201ENST00000261900 LCE3BQ5TA77 95 aa3.03□□□□□ -1.92
CCNT1-201ENST00000261900 DNAH3Q8TD57 4116 aa3.03□□□□□ -1.92
CCNT1-201ENST00000261900 KRTAP19-8Q3LI54 63 aa3.03□□□□□ -1.92
CCNT1-201ENST00000261900 LCE2DQ5TA82 110 aaPredicted RBP3.02□□□□□ -1.93
CCNT1-201ENST00000261900 MT1GP13640 62 aa3.02□□□□□ -1.93
CCNT1-201ENST00000261900 DNAH7Q8WXX0 4024 aa3□□□□□ -1.93
CCNT1-201ENST00000261900 KRTAP19-1Q8IUB9 90 aa3□□□□□ -1.93
CCNT1-201ENST00000261900 LRP1Q07954 4544 aaKnown RBP2.97□□□□□ -1.93
CCNT1-201ENST00000261900 STARD9Q9P2P6 4700 aa2.97□□□□□ -1.93
CCNT1-201ENST00000261900 KIAA1109Q2LD37 5005 aa2.97□□□□□ -1.93
CCNT1-201ENST00000261900 BIRC6Q9NR09 4857 aa2.96□□□□□ -1.94
CCNT1-201ENST00000261900 SPRR5A0A1B0GTR4 108 aa2.95□□□□□ -1.94
CCNT1-201ENST00000261900 EPPK1P58107 5090 aaKnown RBP2.95□□□□□ -1.94
CCNT1-201ENST00000261900 DNAH2Q9P225 4427 aa2.94□□□□□ -1.94
CCNT1-201ENST00000261900 SACSQ9NZJ4 4579 aa2.94□□□□□ -1.94
CCNT1-201ENST00000261900 SYNE1Q8NF91 8797 aaKnown RBP2.93□□□□□ -1.94
CCNT1-201ENST00000261900 KRTAP17-1Q9BYP8 105 aa2.93□□□□□ -1.94
CCNT1-201ENST00000261900 FRAS1Q86XX4 4008 aa2.92□□□□□ -1.94
CCNT1-201ENST00000261900 LRP1BQ9NZR2 4599 aa2.92□□□□□ -1.94
CCNT1-201ENST00000261900 RYR3Q15413 4870 aa2.91□□□□□ -1.94
CCNT1-201ENST00000261900 KRTAP9-2Q9BYQ4 174 aa2.9□□□□□ -1.95
CCNT1-201ENST00000261900 PRKDCP78527 4128 aaKnown RBP2.89□□□□□ -1.95
CCNT1-201ENST00000261900 MT1XP80297 61 aa2.88□□□□□ -1.95
CCNT1-201ENST00000261900 DYNC2H1Q8NCM8 4307 aaKnown RBP2.88□□□□□ -1.95
CCNT1-201ENST00000261900 HERC1Q15751 4861 aa2.88□□□□□ -1.95
CCNT1-201ENST00000261900 KMT2CQ8NEZ4 4911 aaKnown RBP2.88□□□□□ -1.95
CCNT1-201ENST00000261900 LCE3DQ9BYE3 92 aa2.88□□□□□ -1.95
CCNT1-201ENST00000261900 FAT2Q9NYQ8 4349 aa2.87□□□□□ -1.95
CCNT1-201ENST00000261900 MT1BP07438 61 aa2.87□□□□□ -1.95
CCNT1-201ENST00000261900 KRTAP9-6A0A140TA67 174 aa2.87□□□□□ -1.95
CCNT1-201ENST00000261900 DNAH8Q96JB1 4490 aa2.86□□□□□ -1.95
CCNT1-201ENST00000261900 KRTAP9-8Q9BYQ0 159 aa2.85□□□□□ -1.95
CCNT1-201ENST00000261900 MT4P47944 62 aa2.85□□□□□ -1.95
CCNT1-201ENST00000261900 KRTAP19-3Q7Z4W3 81 aa2.85□□□□□ -1.95
CCNT1-201ENST00000261900 APOBP04114 4563 aaKnown RBP2.84□□□□□ -1.95
CCNT1-201ENST00000261900 KRTAP4-8A0A0G2JLE6 195 aa2.83□□□□□ -1.96
CCNT1-201ENST00000261900 KRTAP4-8Q9BYQ9 185 aa2.83□□□□□ -1.96
CCNT1-201ENST00000261900 KRTAP9-3Q9BYQ3 159 aa2.83□□□□□ -1.96
CCNT1-201ENST00000261900 PCLOQ9Y6V0 5065 aa2.83□□□□□ -1.96
CCNT1-201ENST00000261900 DNAH6Q9C0G6 4158 aa2.83□□□□□ -1.96
CCNT1-201ENST00000261900 HYDINQ4G0P3 5121 aa2.83□□□□□ -1.96
CCNT1-201ENST00000261900 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
CCNT1-201ENST00000261900 HERC2O95714 4834 aa2.8□□□□□ -1.96
CCNT1-201ENST00000261900 MT3P25713 68 aa2.79□□□□□ -1.96
CCNT1-201ENST00000261900 KRTAP20-1Q3LI63 56 aa2.78□□□□□ -1.96
CCNT1-201ENST00000261900 LCE1BQ5T7P3 118 aa2.74□□□□□ -1.97
CCNT1-201ENST00000261900 KMT2AQ03164 3969 aa2.73□□□□□ -1.97
CCNT1-201ENST00000261900 ABCA13Q86UQ4 5058 aa2.73□□□□□ -1.97
CCNT1-201ENST00000261900 PKHD1P08F94 4074 aa2.73□□□□□ -1.97
CCNT1-201ENST00000261900 MT1LQ93083 61 aa2.72□□□□□ -1.97
CCNT1-201ENST00000261900 PKD1P98161 4303 aa2.72□□□□□ -1.97
CCNT1-201ENST00000261900 LCE1DQ5T752 114 aa2.72□□□□□ -1.97
CCNT1-201ENST00000261900 HECTD4Q9Y4D8 3996 aa2.71□□□□□ -1.98
CCNT1-201ENST00000261900 HSPG2P98160 4391 aa2.71□□□□□ -1.98
CCNT1-201ENST00000261900 MYCBP2O75592 4640 aa2.71□□□□□ -1.98
CCNT1-201ENST00000261900 KRTAP9-7A8MTY7 169 aa2.71□□□□□ -1.98
CCNT1-201ENST00000261900 KRTAP19-6Q3LI70 58 aa2.7□□□□□ -1.98
CCNT1-201ENST00000261900 MT1EP04732 61 aa2.67□□□□□ -1.98
CCNT1-201ENST00000261900 MT1MQ8N339 61 aa2.64□□□□□ -1.99
CCNT1-201ENST00000261900 LCE5AQ5TCM9 118 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms