RNA–Protein interactions for RNA: ENST00000255476.2

RFXAP-201, Transcript of regulatory factor X associated protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFXAP, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAP-201ENST00000255476 ADM2Q7Z4H4 148 aa11.32□□□□□ -0.6
RFXAP-201ENST00000255476 H3BS24 57 aa11.31□□□□□ -0.6
RFXAP-201ENST00000255476 LINC01554Q52M75 96 aa11.3□□□□□ -0.6
RFXAP-201ENST00000255476 LPAP08519 4548 aa11.28□□□□□ -0.6
RFXAP-201ENST00000255476 PCLOQ9Y6V0 5065 aa11.25□□□□□ -0.61
RFXAP-201ENST00000255476 RPL37P61927 97 aaKnown RBP11.24□□□□□ -0.61
RFXAP-201ENST00000255476 LRP2P98164 4655 aa11.22□□□□□ -0.61
RFXAP-201ENST00000255476 TPRXLQ17RH7 258 aa11.21□□□□□ -0.62
RFXAP-201ENST00000255476 SPATA8Q6RVD6 105 aa11.18□□□□□ -0.62
RFXAP-201ENST00000255476 ACYP2P14621 99 aa11.17□□□□□ -0.62
RFXAP-201ENST00000255476 DMAC1Q96GE9 116 aa11.09□□□□□ -0.63
RFXAP-201ENST00000255476 A0A1B0GU69 56 aa11.08□□□□□ -0.64
RFXAP-201ENST00000255476 HERC1Q15751 4861 aa11.04□□□□□ -0.64
RFXAP-201ENST00000255476 MIR22HGQ0VDD5 57 aa11.03□□□□□ -0.64
RFXAP-201ENST00000255476 UQCR11O14957 56 aa11□□□□□ -0.65
RFXAP-201ENST00000255476 CSAG1Q6PB30 78 aa10.98□□□□□ -0.65
RFXAP-201ENST00000255476 KRTAP3-1Q9BYR8 98 aa10.93□□□□□ -0.66
RFXAP-201ENST00000255476 COX6B2Q6YFQ2 88 aa10.85□□□□□ -0.67
RFXAP-201ENST00000255476 HMCN2Q8NDA2 5059 aa10.83□□□□□ -0.68
RFXAP-201ENST00000255476 SEC61BP60468 96 aaKnown RBP10.81□□□□□ -0.68
RFXAP-201ENST00000255476 KRTAP4-1Q9BYQ7 146 aa10.73□□□□□ -0.69
RFXAP-201ENST00000255476 MUC17Q685J3 4493 aa10.71□□□□□ -0.7
RFXAP-201ENST00000255476 MUC2Q02817 5179 aa10.63□□□□□ -0.71
RFXAP-201ENST00000255476 KRTAP25-1Q3LHN0 102 aa10.62□□□□□ -0.71
RFXAP-201ENST00000255476 ROMO1P60602 79 aa10.59□□□□□ -0.71
RFXAP-201ENST00000255476 H1FX-AS1Q4G0G2 97 aa10.55□□□□□ -0.72
RFXAP-201ENST00000255476 H0YAA0 97 aa10.53□□□□□ -0.72
RFXAP-201ENST00000255476 KRTAP3-3Q9BYR6 98 aa10.52□□□□□ -0.72
RFXAP-201ENST00000255476 S4R3F8 94 aa10.52□□□□□ -0.73
RFXAP-201ENST00000255476 UBR4Q5T4S7 5183 aa10.43□□□□□ -0.74
RFXAP-201ENST00000255476 KRTAP19-2Q3LHN2 52 aa10.4□□□□□ -0.74
RFXAP-201ENST00000255476 P0C880 135 aa10.32□□□□□ -0.76
RFXAP-201ENST00000255476 A0A1B0GU33 70 aa10.32□□□□□ -0.76
RFXAP-201ENST00000255476 RNF213Q63HN8 5207 aa10.31□□□□□ -0.76
RFXAP-201ENST00000255476 CRIPTQ9P021 101 aa10.21□□□□□ -0.78
RFXAP-201ENST00000255476 FAT4Q6V0I7 4981 aa10.18□□□□□ -0.78
RFXAP-201ENST00000255476 FLGP20930 4061 aaPredicted RBP10.17□□□□□ -0.78
RFXAP-201ENST00000255476 KRTAP3-2Q9BYR7 98 aa10.17□□□□□ -0.78
RFXAP-201ENST00000255476 KRTAP10-6P60371 365 aaPredicted RBP10.16□□□□□ -0.78
RFXAP-201ENST00000255476 LCE2CQ5TA81 110 aa10.13□□□□□ -0.79
RFXAP-201ENST00000255476 K7ERS5 55 aa10.12□□□□□ -0.79
RFXAP-201ENST00000255476 KRTAP13-4Q3LI77 160 aa9.95□□□□□ -0.82
RFXAP-201ENST00000255476 SPINT4Q6UDR6 99 aa9.93□□□□□ -0.82
RFXAP-201ENST00000255476 MT1HP80294 61 aa9.9□□□□□ -0.82
RFXAP-201ENST00000255476 KRTAP15-1Q3LI76 137 aa9.88□□□□□ -0.83
RFXAP-201ENST00000255476 M0R2T5 61 aa9.84□□□□□ -0.83
RFXAP-201ENST00000255476 NDUFAF8A1L188 74 aa9.83□□□□□ -0.84
RFXAP-201ENST00000255476 LORP23490 312 aaPredicted RBP9.83□□□□□ -0.84
RFXAP-201ENST00000255476 A0A0D9SG42 100 aa9.79□□□□□ -0.84
RFXAP-201ENST00000255476 C10orf95Q9H7T3 257 aa9.77□□□□□ -0.85
RFXAP-201ENST00000255476 A0A0A0MQY5 61 aa9.74□□□□□ -0.85
RFXAP-201ENST00000255476 M0QZ58 72 aa9.73□□□□□ -0.85
RFXAP-201ENST00000255476 R4GN34 69 aa9.72□□□□□ -0.85
RFXAP-201ENST00000255476 KRTAP9-8Q9BYQ0 159 aa9.56□□□□□ -0.88
RFXAP-201ENST00000255476 MT2AP02795 61 aa9.54□□□□□ -0.88
RFXAP-201ENST00000255476 KRTAP12-2P59991 146 aa9.54□□□□□ -0.88
RFXAP-201ENST00000255476 KRTAP12-1P59990 96 aa9.52□□□□□ -0.89
RFXAP-201ENST00000255476 MT1FP04733 61 aa9.51□□□□□ -0.89
RFXAP-201ENST00000255476 KRTAP10-10P60014 251 aa9.48□□□□□ -0.89
RFXAP-201ENST00000255476 LCE2AQ5TA79 106 aaPredicted RBP9.42□□□□□ -0.9
RFXAP-201ENST00000255476 KRTAP19-1Q8IUB9 90 aa9.37□□□□□ -0.91
RFXAP-201ENST00000255476 SPRR2GQ9BYE4 73 aa9.34□□□□□ -0.91
RFXAP-201ENST00000255476 LUZP6Q538Z0 58 aa9.2□□□□□ -0.94
RFXAP-201ENST00000255476 KRTAP9-3Q9BYQ3 159 aa9.2□□□□□ -0.94
RFXAP-201ENST00000255476 CAMK2N1Q7Z7J9 78 aa9.12□□□□□ -0.95
RFXAP-201ENST00000255476 KRTAP19-8Q3LI54 63 aa9.06□□□□□ -0.96
RFXAP-201ENST00000255476 PLAC4Q8WY50 150 aa9.06□□□□□ -0.96
RFXAP-201ENST00000255476 MT1BP07438 61 aa9.01□□□□□ -0.97
RFXAP-201ENST00000255476 LCE2BO14633 110 aa8.97□□□□□ -0.97
RFXAP-201ENST00000255476 USH2AO75445 5202 aa8.85□□□□□ -0.99
RFXAP-201ENST00000255476 MT1XP80297 61 aa8.75□□□□□ -1.01
RFXAP-201ENST00000255476 KRTAP10-5P60370 271 aa8.74□□□□□ -1.01
RFXAP-201ENST00000255476 PP632Q6XCG6 107 aa8.67□□□□□ -1.02
RFXAP-201ENST00000255476 TNP1P09430 55 aa8.65□□□□□ -1.02
RFXAP-201ENST00000255476 FSIP2Q5CZC0 6907 aa8.57□□□□□ -1.04
RFXAP-201ENST00000255476 PRO2289Q9P1D8 64 aa8.53□□□□□ -1.04
RFXAP-201ENST00000255476 SSPOA2VEC9 5147 aa8.5□□□□□ -1.05
RFXAP-201ENST00000255476 KRTAP10-7P60409 375 aaPredicted RBP8.45□□□□□ -1.06
RFXAP-201ENST00000255476 SPRR5A0A1B0GTR4 108 aa8.43□□□□□ -1.06
RFXAP-201ENST00000255476 LCE2DQ5TA82 110 aaPredicted RBP8.43□□□□□ -1.06
RFXAP-201ENST00000255476 LCE3AQ5TA76 89 aa8.35□□□□□ -1.07
RFXAP-201ENST00000255476 KRTAP23-1A1A580 65 aa8.31□□□□□ -1.08
RFXAP-201ENST00000255476 KRTAP10-12P60413 245 aa8.3□□□□□ -1.08
RFXAP-201ENST00000255476 KRTAP19-6Q3LI70 58 aa8.3□□□□□ -1.08
RFXAP-201ENST00000255476 KMT2DO14686 5537 aa8.24□□□□□ -1.09
RFXAP-201ENST00000255476 KRTAP9-2Q9BYQ4 174 aa8.15□□□□□ -1.1
RFXAP-201ENST00000255476 KRTAP4-8A0A0G2JLE6 195 aa8.13□□□□□ -1.11
RFXAP-201ENST00000255476 KRTAP4-8Q9BYQ9 185 aa8.13□□□□□ -1.11
RFXAP-201ENST00000255476 KRTAP8-1Q8IUC2 63 aa8.11□□□□□ -1.11
RFXAP-201ENST00000255476 FCGBPQ9Y6R7 5405 aaPredicted RBP8.09□□□□□ -1.11
RFXAP-201ENST00000255476 KRTAP12-3P60328 96 aa7.97□□□□□ -1.13
RFXAP-201ENST00000255476 KRTAP19-5Q3LI72 72 aa7.94□□□□□ -1.14
RFXAP-201ENST00000255476 INE1O15225 51 aa7.89□□□□□ -1.15
RFXAP-201ENST00000255476 CRCT1Q9UGL9 99 aa7.86□□□□□ -1.15
RFXAP-201ENST00000255476 KRTAP19-7Q3SYF9 63 aa7.8□□□□□ -1.16
RFXAP-201ENST00000255476 MACF1Q9UPN3 7388 aaKnown RBP7.75□□□□□ -1.17
RFXAP-201ENST00000255476 MT1EP04732 61 aa7.63□□□□□ -1.19
RFXAP-201ENST00000255476 SYNE2Q8WXH0 6885 aaKnown RBP7.56□□□□□ -1.2
RFXAP-201ENST00000255476 MUC12Q9UKN1 5478 aa7.55□□□□□ -1.2
RFXAP-201ENST00000255476 MT1LQ93083 61 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms