RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 EPPK1P58107 5090 aaKnown RBP8.79□□□□□ -1
SLC52A1-201ENST00000254853 RPL37P61927 97 aaKnown RBP8.79□□□□□ -1
SLC52A1-201ENST00000254853 KRTAP25-1Q3LHN0 102 aa8.79□□□□□ -1
SLC52A1-201ENST00000254853 HSPG2P98160 4391 aa8.78□□□□□ -1
SLC52A1-201ENST00000254853 KRTAP10-6P60371 365 aaPredicted RBP8.77□□□□□ -1.01
SLC52A1-201ENST00000254853 K7ERS5 55 aa8.76□□□□□ -1.01
SLC52A1-201ENST00000254853 XP32Q5T750 250 aa8.75□□□□□ -1.01
SLC52A1-201ENST00000254853 Q5VSD8 79 aa8.73□□□□□ -1.01
SLC52A1-201ENST00000254853 KRTAP13-4Q3LI77 160 aa8.71□□□□□ -1.02
SLC52A1-201ENST00000254853 DMBT1Q9UGM3 2413 aaPredicted RBP8.7□□□□□ -1.02
SLC52A1-201ENST00000254853 KRTAP3-2Q9BYR7 98 aa8.7□□□□□ -1.02
SLC52A1-201ENST00000254853 S4R3F8 94 aa8.69□□□□□ -1.02
SLC52A1-201ENST00000254853 CRIPTQ9P021 101 aa8.68□□□□□ -1.02
SLC52A1-201ENST00000254853 MYCBP2O75592 4640 aa8.68□□□□□ -1.02
SLC52A1-201ENST00000254853 BIRC6Q9NR09 4857 aa8.64□□□□□ -1.03
SLC52A1-201ENST00000254853 A0A0D9SG42 100 aa8.64□□□□□ -1.03
SLC52A1-201ENST00000254853 ROMO1P60602 79 aa8.61□□□□□ -1.03
SLC52A1-201ENST00000254853 KRTAP17-1Q9BYP8 105 aa8.61□□□□□ -1.03
SLC52A1-201ENST00000254853 P0C880 135 aa8.59□□□□□ -1.03
SLC52A1-201ENST00000254853 RYR1P21817 5038 aa8.54□□□□□ -1.04
SLC52A1-201ENST00000254853 MT1HL1P0DM35 61 aa8.53□□□□□ -1.04
SLC52A1-201ENST00000254853 LPAP08519 4548 aa8.45□□□□□ -1.06
SLC52A1-201ENST00000254853 KRTAP12-2P59991 146 aa8.42□□□□□ -1.06
SLC52A1-201ENST00000254853 TPRXLQ17RH7 258 aa8.42□□□□□ -1.06
SLC52A1-201ENST00000254853 KIAA1109Q2LD37 5005 aa8.41□□□□□ -1.06
SLC52A1-201ENST00000254853 LRP2P98164 4655 aa8.37□□□□□ -1.07
SLC52A1-201ENST00000254853 HERC2O95714 4834 aa8.36□□□□□ -1.07
SLC52A1-201ENST00000254853 C10orf95Q9H7T3 257 aa8.36□□□□□ -1.07
SLC52A1-201ENST00000254853 KRTAP12-1P59990 96 aa8.35□□□□□ -1.07
SLC52A1-201ENST00000254853 H3BS24 57 aa8.34□□□□□ -1.07
SLC52A1-201ENST00000254853 SPINT4Q6UDR6 99 aa8.33□□□□□ -1.08
SLC52A1-201ENST00000254853 M0QZ58 72 aa8.27□□□□□ -1.09
SLC52A1-201ENST00000254853 PCLOQ9Y6V0 5065 aa8.26□□□□□ -1.09
SLC52A1-201ENST00000254853 KRTAP4-5Q9BYR2 181 aa8.2□□□□□ -1.1
SLC52A1-201ENST00000254853 ABCA13Q86UQ4 5058 aa8.17□□□□□ -1.1
SLC52A1-201ENST00000254853 R4GN34 69 aa8.06□□□□□ -1.12
SLC52A1-201ENST00000254853 KRTAP15-1Q3LI76 137 aa8.04□□□□□ -1.12
SLC52A1-201ENST00000254853 MUC17Q685J3 4493 aa8.04□□□□□ -1.12
SLC52A1-201ENST00000254853 SEC61BP60468 96 aaKnown RBP8.02□□□□□ -1.13
SLC52A1-201ENST00000254853 LORP23490 312 aaPredicted RBP8□□□□□ -1.13
SLC52A1-201ENST00000254853 KRTAP4-1Q9BYQ7 146 aa7.99□□□□□ -1.13
SLC52A1-201ENST00000254853 NDUFAF8A1L188 74 aa7.87□□□□□ -1.15
SLC52A1-201ENST00000254853 KRTAP19-2Q3LHN2 52 aa7.85□□□□□ -1.15
SLC52A1-201ENST00000254853 HERC1Q15751 4861 aa7.84□□□□□ -1.15
SLC52A1-201ENST00000254853 J3QL48 77 aa7.82□□□□□ -1.16
SLC52A1-201ENST00000254853 CAMK2N1Q7Z7J9 78 aa7.67□□□□□ -1.18
SLC52A1-201ENST00000254853 PLAC4Q8WY50 150 aa7.65□□□□□ -1.18
SLC52A1-201ENST00000254853 MUC2Q02817 5179 aa7.59□□□□□ -1.19
SLC52A1-201ENST00000254853 FLGP20930 4061 aaPredicted RBP7.58□□□□□ -1.2
SLC52A1-201ENST00000254853 PP632Q6XCG6 107 aa7.56□□□□□ -1.2
SLC52A1-201ENST00000254853 HMCN2Q8NDA2 5059 aa7.5□□□□□ -1.21
SLC52A1-201ENST00000254853 UBR4Q5T4S7 5183 aa7.41□□□□□ -1.22
SLC52A1-201ENST00000254853 TNP1P09430 55 aa7.39□□□□□ -1.23
SLC52A1-201ENST00000254853 LCE2CQ5TA81 110 aa7.33□□□□□ -1.24
SLC52A1-201ENST00000254853 LUZP6Q538Z0 58 aa7.29□□□□□ -1.24
SLC52A1-201ENST00000254853 KRTAP23-1A1A580 65 aa7.28□□□□□ -1.24
SLC52A1-201ENST00000254853 FAT4Q6V0I7 4981 aa7.25□□□□□ -1.25
SLC52A1-201ENST00000254853 SPRR2GQ9BYE4 73 aa7.25□□□□□ -1.25
SLC52A1-201ENST00000254853 KRTAP19-1Q8IUB9 90 aa7.23□□□□□ -1.25
SLC52A1-201ENST00000254853 RNF213Q63HN8 5207 aa7.22□□□□□ -1.25
SLC52A1-201ENST00000254853 M0R2T5 61 aa7.16□□□□□ -1.26
SLC52A1-201ENST00000254853 MT1HP80294 61 aa7.12□□□□□ -1.27
SLC52A1-201ENST00000254853 SPRR5A0A1B0GTR4 108 aa7.11□□□□□ -1.27
SLC52A1-201ENST00000254853 MT1FP04733 61 aa7.06□□□□□ -1.28
SLC52A1-201ENST00000254853 MT2AP02795 61 aa7.04□□□□□ -1.28
SLC52A1-201ENST00000254853 KRTAP10-10P60014 251 aa7.03□□□□□ -1.28
SLC52A1-201ENST00000254853 LCE3AQ5TA76 89 aa7.02□□□□□ -1.29
SLC52A1-201ENST00000254853 KRTAP9-8Q9BYQ0 159 aa6.98□□□□□ -1.29
SLC52A1-201ENST00000254853 A0A0A0MQY5 61 aa6.96□□□□□ -1.3
SLC52A1-201ENST00000254853 KRTAP19-8Q3LI54 63 aa6.9□□□□□ -1.3
SLC52A1-201ENST00000254853 MT1BP07438 61 aa6.84□□□□□ -1.31
SLC52A1-201ENST00000254853 KRTAP10-5P60370 271 aa6.83□□□□□ -1.32
SLC52A1-201ENST00000254853 KRTAP8-1Q8IUC2 63 aa6.82□□□□□ -1.32
SLC52A1-201ENST00000254853 MT1XP80297 61 aa6.81□□□□□ -1.32
SLC52A1-201ENST00000254853 LCE2AQ5TA79 106 aaPredicted RBP6.7□□□□□ -1.34
SLC52A1-201ENST00000254853 KRTAP10-12P60413 245 aa6.69□□□□□ -1.34
SLC52A1-201ENST00000254853 KRTAP9-3Q9BYQ3 159 aa6.67□□□□□ -1.34
SLC52A1-201ENST00000254853 KRTAP12-3P60328 96 aa6.66□□□□□ -1.34
SLC52A1-201ENST00000254853 KRTAP10-7P60409 375 aaPredicted RBP6.65□□□□□ -1.35
SLC52A1-201ENST00000254853 KRTAP9-2Q9BYQ4 174 aa6.53□□□□□ -1.36
SLC52A1-201ENST00000254853 PRO2289Q9P1D8 64 aa6.49□□□□□ -1.37
SLC52A1-201ENST00000254853 LCE2BO14633 110 aa6.41□□□□□ -1.38
SLC52A1-201ENST00000254853 KRTAP19-5Q3LI72 72 aa6.38□□□□□ -1.39
SLC52A1-201ENST00000254853 INE1O15225 51 aa6.29□□□□□ -1.4
SLC52A1-201ENST00000254853 LCE2DQ5TA82 110 aaPredicted RBP6.29□□□□□ -1.4
SLC52A1-201ENST00000254853 KRTAP9-6A0A140TA67 174 aa6.29□□□□□ -1.4
SLC52A1-201ENST00000254853 FSIP2Q5CZC0 6907 aa6.29□□□□□ -1.4
SLC52A1-201ENST00000254853 LCE3CQ5T5A8 94 aa6.28□□□□□ -1.4
SLC52A1-201ENST00000254853 USH2AO75445 5202 aa6.25□□□□□ -1.41
SLC52A1-201ENST00000254853 KRTAP4-8A0A0G2JLE6 195 aa6.22□□□□□ -1.41
SLC52A1-201ENST00000254853 KRTAP4-8Q9BYQ9 185 aa6.22□□□□□ -1.41
SLC52A1-201ENST00000254853 KMT2DO14686 5537 aa6.22□□□□□ -1.41
SLC52A1-201ENST00000254853 CRCT1Q9UGL9 99 aa6.15□□□□□ -1.42
SLC52A1-201ENST00000254853 KRTAP9-6A8MVA2 160 aa6.09□□□□□ -1.43
SLC52A1-201ENST00000254853 KRTAP19-7Q3SYF9 63 aa6.07□□□□□ -1.44
SLC52A1-201ENST00000254853 LOC100996750A0A140TA64 210 aa6.04□□□□□ -1.44
SLC52A1-201ENST00000254853 KRTAP4-6Q9BYQ5 205 aa6.04□□□□□ -1.44
SLC52A1-201ENST00000254853 KRTAP4-7Q9BYR0 210 aa6.01□□□□□ -1.45
SLC52A1-201ENST00000254853 SSPOA2VEC9 5147 aa5.9□□□□□ -1.46
SLC52A1-201ENST00000254853 MT1LQ93083 61 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms