RNA–Protein interactions for RNA: ENST00000254488.6

SLC6A11-201, Transcript of solute carrier family 6 member 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A11, Length 4,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11-201ENST00000254488 LYSTQ99698 3801 aa7.62□□□□□ -1.19
SLC6A11-201ENST00000254488 VPS13DQ5THJ4 4388 aa7.61□□□□□ -1.19
SLC6A11-201ENST00000254488 FRAS1Q86XX4 4008 aa7.56□□□□□ -1.2
SLC6A11-201ENST00000254488 STARD9Q9P2P6 4700 aa7.56□□□□□ -1.2
SLC6A11-201ENST00000254488 DNAH3Q8TD57 4116 aa7.55□□□□□ -1.2
SLC6A11-201ENST00000254488 PP632Q6XCG6 107 aa7.55□□□□□ -1.2
SLC6A11-201ENST00000254488 CMYA5Q8N3K9 4069 aa7.55□□□□□ -1.2
SLC6A11-201ENST00000254488 LRP1BQ9NZR2 4599 aa7.51□□□□□ -1.21
SLC6A11-201ENST00000254488 TNP1P09430 55 aa7.51□□□□□ -1.21
SLC6A11-201ENST00000254488 DNAH2Q9P225 4427 aa7.48□□□□□ -1.21
SLC6A11-201ENST00000254488 KRTAP10-4P60372 401 aaPredicted RBP7.45□□□□□ -1.22
SLC6A11-201ENST00000254488 KMT2AQ03164 3969 aa7.44□□□□□ -1.22
SLC6A11-201ENST00000254488 KRTAP10-10P60014 251 aa7.42□□□□□ -1.22
SLC6A11-201ENST00000254488 DNAH7Q8WXX0 4024 aa7.42□□□□□ -1.22
SLC6A11-201ENST00000254488 DNAH5Q8TE73 4624 aa7.39□□□□□ -1.23
SLC6A11-201ENST00000254488 HECTD4Q9Y4D8 3996 aa7.36□□□□□ -1.23
SLC6A11-201ENST00000254488 VPS13BQ7Z7G8 4022 aa7.27□□□□□ -1.25
SLC6A11-201ENST00000254488 DYNC2H1Q8NCM8 4307 aaKnown RBP7.26□□□□□ -1.25
SLC6A11-201ENST00000254488 FAT1Q14517 4588 aa7.26□□□□□ -1.25
SLC6A11-201ENST00000254488 DNAH6Q9C0G6 4158 aa7.26□□□□□ -1.25
SLC6A11-201ENST00000254488 KMT2CQ8NEZ4 4911 aaKnown RBP7.24□□□□□ -1.25
SLC6A11-201ENST00000254488 HYDINQ4G0P3 5121 aa7.2□□□□□ -1.26
SLC6A11-201ENST00000254488 MT1HL1P0DM35 61 aa7.15□□□□□ -1.27
SLC6A11-201ENST00000254488 KIAA1109Q2LD37 5005 aa7.15□□□□□ -1.27
SLC6A11-201ENST00000254488 SACSQ9NZJ4 4579 aa7.14□□□□□ -1.27
SLC6A11-201ENST00000254488 DYNC1H1Q14204 4646 aaKnown RBP7.13□□□□□ -1.27
SLC6A11-201ENST00000254488 KRTAP4-5Q9BYR2 181 aa7.13□□□□□ -1.27
SLC6A11-201ENST00000254488 LORP23490 312 aaPredicted RBP7.06□□□□□ -1.28
SLC6A11-201ENST00000254488 RYR3Q15413 4870 aa7.05□□□□□ -1.28
SLC6A11-201ENST00000254488 MYCBP2O75592 4640 aa7.04□□□□□ -1.28
SLC6A11-201ENST00000254488 RYR2Q92736 4967 aa7.03□□□□□ -1.28
SLC6A11-201ENST00000254488 PKHD1P08F94 4074 aa6.98□□□□□ -1.29
SLC6A11-201ENST00000254488 RYR1P21817 5038 aa6.95□□□□□ -1.3
SLC6A11-201ENST00000254488 APOBP04114 4563 aaKnown RBP6.94□□□□□ -1.3
SLC6A11-201ENST00000254488 FAT2Q9NYQ8 4349 aa6.91□□□□□ -1.3
SLC6A11-201ENST00000254488 PRO2289Q9P1D8 64 aa6.9□□□□□ -1.31
SLC6A11-201ENST00000254488 EPPK1P58107 5090 aaKnown RBP6.87□□□□□ -1.31
SLC6A11-201ENST00000254488 LRP1Q07954 4544 aaKnown RBP6.85□□□□□ -1.31
SLC6A11-201ENST00000254488 KRTAP17-1Q9BYP8 105 aa6.84□□□□□ -1.32
SLC6A11-201ENST00000254488 FAT3Q8TDW7 4589 aa6.77□□□□□ -1.33
SLC6A11-201ENST00000254488 PKD1P98161 4303 aa6.75□□□□□ -1.33
SLC6A11-201ENST00000254488 KRTAP23-1A1A580 65 aa6.7□□□□□ -1.34
SLC6A11-201ENST00000254488 HERC2O95714 4834 aa6.7□□□□□ -1.34
SLC6A11-201ENST00000254488 KRTAP4-1Q9BYQ7 146 aa6.66□□□□□ -1.34
SLC6A11-201ENST00000254488 BIRC6Q9NR09 4857 aa6.65□□□□□ -1.34
SLC6A11-201ENST00000254488 HSPG2P98160 4391 aa6.62□□□□□ -1.35
SLC6A11-201ENST00000254488 LRP2P98164 4655 aa6.61□□□□□ -1.35
SLC6A11-201ENST00000254488 INE1O15225 51 aa6.56□□□□□ -1.36
SLC6A11-201ENST00000254488 LCE3AQ5TA76 89 aa6.55□□□□□ -1.36
SLC6A11-201ENST00000254488 PKHD1L1Q86WI1 4243 aa6.54□□□□□ -1.36
SLC6A11-201ENST00000254488 ABCA13Q86UQ4 5058 aa6.52□□□□□ -1.37
SLC6A11-201ENST00000254488 CRCT1Q9UGL9 99 aa6.41□□□□□ -1.38
SLC6A11-201ENST00000254488 KRTAP12-3P60328 96 aa6.37□□□□□ -1.39
SLC6A11-201ENST00000254488 KRTAP10-12P60413 245 aa6.36□□□□□ -1.39
SLC6A11-201ENST00000254488 TNXBP22105 4242 aa6.35□□□□□ -1.39
SLC6A11-201ENST00000254488 HERC1Q15751 4861 aa6.34□□□□□ -1.4
SLC6A11-201ENST00000254488 PCLOQ9Y6V0 5065 aa6.3□□□□□ -1.4
SLC6A11-201ENST00000254488 SPRR5A0A1B0GTR4 108 aa6.3□□□□□ -1.4
SLC6A11-201ENST00000254488 LPAP08519 4548 aa6.29□□□□□ -1.4
SLC6A11-201ENST00000254488 SPRR2GQ9BYE4 73 aa6.25□□□□□ -1.41
SLC6A11-201ENST00000254488 KRTAP8-1Q8IUC2 63 aa6.14□□□□□ -1.43
SLC6A11-201ENST00000254488 RNF213Q63HN8 5207 aa6.14□□□□□ -1.43
SLC6A11-201ENST00000254488 KRTAP19-1Q8IUB9 90 aa6.11□□□□□ -1.43
SLC6A11-201ENST00000254488 UBR4Q5T4S7 5183 aa6.1□□□□□ -1.43
SLC6A11-201ENST00000254488 KRTAP19-2Q3LHN2 52 aa6.07□□□□□ -1.44
SLC6A11-201ENST00000254488 MT1HP80294 61 aa6.06□□□□□ -1.44
SLC6A11-201ENST00000254488 MUC2Q02817 5179 aa6.05□□□□□ -1.44
SLC6A11-201ENST00000254488 MT2AP02795 61 aa6.05□□□□□ -1.44
SLC6A11-201ENST00000254488 MT1FP04733 61 aa6.03□□□□□ -1.44
SLC6A11-201ENST00000254488 MUC17Q685J3 4493 aa5.94□□□□□ -1.46
SLC6A11-201ENST00000254488 HMCN2Q8NDA2 5059 aa5.91□□□□□ -1.46
SLC6A11-201ENST00000254488 FSIP2Q5CZC0 6907 aa5.89□□□□□ -1.47
SLC6A11-201ENST00000254488 SYNE1Q8NF91 8797 aaKnown RBP5.87□□□□□ -1.47
SLC6A11-201ENST00000254488 FLGP20930 4061 aaPredicted RBP5.86□□□□□ -1.47
SLC6A11-201ENST00000254488 KRTAP19-8Q3LI54 63 aa5.84□□□□□ -1.47
SLC6A11-201ENST00000254488 FAT4Q6V0I7 4981 aa5.84□□□□□ -1.47
SLC6A11-201ENST00000254488 KRTAP10-7P60409 375 aaPredicted RBP5.83□□□□□ -1.48
SLC6A11-201ENST00000254488 LCE2CQ5TA81 110 aa5.83□□□□□ -1.48
SLC6A11-201ENST00000254488 MT1XP80297 61 aa5.83□□□□□ -1.48
SLC6A11-201ENST00000254488 KRTAP10-5P60370 271 aa5.81□□□□□ -1.48
SLC6A11-201ENST00000254488 KRTAP19-5Q3LI72 72 aa5.81□□□□□ -1.48
SLC6A11-201ENST00000254488 LCE3CQ5T5A8 94 aa5.81□□□□□ -1.48
SLC6A11-201ENST00000254488 MT1BP07438 61 aa5.76□□□□□ -1.49
SLC6A11-201ENST00000254488 KRTAP9-8Q9BYQ0 159 aa5.72□□□□□ -1.49
SLC6A11-201ENST00000254488 OBSCNQ5VST9 7968 aa5.71□□□□□ -1.5
SLC6A11-201ENST00000254488 SPRR2FQ96RM1 72 aa5.59□□□□□ -1.52
SLC6A11-201ENST00000254488 KRTAP4-8A0A0G2JLE6 195 aa5.49□□□□□ -1.53
SLC6A11-201ENST00000254488 KRTAP4-8Q9BYQ9 185 aa5.49□□□□□ -1.53
SLC6A11-201ENST00000254488 KRTAP9-3Q9BYQ3 159 aa5.48□□□□□ -1.53
SLC6A11-201ENST00000254488 KRTAP4-7Q9BYR0 210 aa5.36□□□□□ -1.55
SLC6A11-201ENST00000254488 KRTAP19-4Q3LI73 84 aa5.34□□□□□ -1.55
SLC6A11-201ENST00000254488 LCE2AQ5TA79 106 aaPredicted RBP5.31□□□□□ -1.56
SLC6A11-201ENST00000254488 USH2AO75445 5202 aa5.24□□□□□ -1.57
SLC6A11-201ENST00000254488 LCE2BO14633 110 aa5.24□□□□□ -1.57
SLC6A11-201ENST00000254488 KRTAP12-4P60329 112 aa5.24□□□□□ -1.57
SLC6A11-201ENST00000254488 MT1GP13640 62 aa5.23□□□□□ -1.57
SLC6A11-201ENST00000254488 LCE3BQ5TA77 95 aa5.18□□□□□ -1.58
SLC6A11-201ENST00000254488 KRTAP9-6A8MVA2 160 aa5.17□□□□□ -1.58
SLC6A11-201ENST00000254488 MT1LQ93083 61 aa5.16□□□□□ -1.58
SLC6A11-201ENST00000254488 KRTAP2-3P0C7H8 128 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms