RNA–Protein interactions for RNA: ENST00000253693.6

CAPN7-201, Transcript of calpain 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN7, Length 4,353 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7-201ENST00000253693 R4GN34 69 aa7.84□□□□□ -1.15
CAPN7-201ENST00000253693 SACSQ9NZJ4 4579 aa7.79□□□□□ -1.16
CAPN7-201ENST00000253693 M0QZ58 72 aa7.78□□□□□ -1.16
CAPN7-201ENST00000253693 FAT2Q9NYQ8 4349 aa7.78□□□□□ -1.16
CAPN7-201ENST00000253693 MT1HL1P0DM35 61 aa7.74□□□□□ -1.17
CAPN7-201ENST00000253693 PKD1P98161 4303 aa7.71□□□□□ -1.17
CAPN7-201ENST00000253693 KRTAP25-1Q3LHN0 102 aa7.71□□□□□ -1.18
CAPN7-201ENST00000253693 PKHD1P08F94 4074 aa7.7□□□□□ -1.18
CAPN7-201ENST00000253693 P0C880 135 aa7.68□□□□□ -1.18
CAPN7-201ENST00000253693 CAMK2N1Q7Z7J9 78 aa7.64□□□□□ -1.19
CAPN7-201ENST00000253693 APOBP04114 4563 aaKnown RBP7.63□□□□□ -1.19
CAPN7-201ENST00000253693 RYR2Q92736 4967 aa7.61□□□□□ -1.19
CAPN7-201ENST00000253693 KRTAP10-6P60371 365 aaPredicted RBP7.56□□□□□ -1.2
CAPN7-201ENST00000253693 M0R2T5 61 aa7.55□□□□□ -1.2
CAPN7-201ENST00000253693 KRTAP3-3Q9BYR6 98 aa7.55□□□□□ -1.2
CAPN7-201ENST00000253693 KRTAP4-5Q9BYR2 181 aa7.53□□□□□ -1.2
CAPN7-201ENST00000253693 LRP1Q07954 4544 aaKnown RBP7.5□□□□□ -1.21
CAPN7-201ENST00000253693 KIAA1109Q2LD37 5005 aa7.48□□□□□ -1.21
CAPN7-201ENST00000253693 KMT2CQ8NEZ4 4911 aaKnown RBP7.47□□□□□ -1.21
CAPN7-201ENST00000253693 KRTAP13-4Q3LI77 160 aa7.47□□□□□ -1.21
CAPN7-201ENST00000253693 KRTAP3-2Q9BYR7 98 aa7.45□□□□□ -1.22
CAPN7-201ENST00000253693 RYR3Q15413 4870 aa7.44□□□□□ -1.22
CAPN7-201ENST00000253693 RYR1P21817 5038 aa7.43□□□□□ -1.22
CAPN7-201ENST00000253693 KRTAP17-1Q9BYP8 105 aa7.42□□□□□ -1.22
CAPN7-201ENST00000253693 MYCBP2O75592 4640 aa7.41□□□□□ -1.22
CAPN7-201ENST00000253693 KRTAP12-2P59991 146 aa7.39□□□□□ -1.23
CAPN7-201ENST00000253693 C10orf95Q9H7T3 257 aa7.37□□□□□ -1.23
CAPN7-201ENST00000253693 FAT3Q8TDW7 4589 aa7.36□□□□□ -1.23
CAPN7-201ENST00000253693 KRTAP12-1P59990 96 aa7.34□□□□□ -1.23
CAPN7-201ENST00000253693 HSPG2P98160 4391 aa7.32□□□□□ -1.24
CAPN7-201ENST00000253693 PKHD1L1Q86WI1 4243 aa7.27□□□□□ -1.25
CAPN7-201ENST00000253693 PLAC4Q8WY50 150 aa7.25□□□□□ -1.25
CAPN7-201ENST00000253693 H3BS24 57 aa7.16□□□□□ -1.26
CAPN7-201ENST00000253693 TNXBP22105 4242 aa7.16□□□□□ -1.26
CAPN7-201ENST00000253693 LUZP6Q538Z0 58 aa7.15□□□□□ -1.27
CAPN7-201ENST00000253693 TNP1P09430 55 aa7.11□□□□□ -1.27
CAPN7-201ENST00000253693 LRP2P98164 4655 aa7.08□□□□□ -1.28
CAPN7-201ENST00000253693 PP632Q6XCG6 107 aa7.07□□□□□ -1.28
CAPN7-201ENST00000253693 KRTAP4-1Q9BYQ7 146 aa7.07□□□□□ -1.28
CAPN7-201ENST00000253693 EPPK1P58107 5090 aaKnown RBP7.03□□□□□ -1.28
CAPN7-201ENST00000253693 KRTAP10-10P60014 251 aa6.99□□□□□ -1.29
CAPN7-201ENST00000253693 NDUFAF8A1L188 74 aa6.98□□□□□ -1.29
CAPN7-201ENST00000253693 LORP23490 312 aaPredicted RBP6.97□□□□□ -1.29
CAPN7-201ENST00000253693 HERC2O95714 4834 aa6.95□□□□□ -1.3
CAPN7-201ENST00000253693 LPAP08519 4548 aa6.92□□□□□ -1.3
CAPN7-201ENST00000253693 ABCA13Q86UQ4 5058 aa6.81□□□□□ -1.32
CAPN7-201ENST00000253693 BIRC6Q9NR09 4857 aa6.77□□□□□ -1.33
CAPN7-201ENST00000253693 KRTAP15-1Q3LI76 137 aa6.68□□□□□ -1.34
CAPN7-201ENST00000253693 A0A0A0MQY5 61 aa6.67□□□□□ -1.34
CAPN7-201ENST00000253693 PRO2289Q9P1D8 64 aa6.6□□□□□ -1.35
CAPN7-201ENST00000253693 KRTAP19-2Q3LHN2 52 aa6.56□□□□□ -1.36
CAPN7-201ENST00000253693 MT1HP80294 61 aa6.54□□□□□ -1.36
CAPN7-201ENST00000253693 HERC1Q15751 4861 aa6.53□□□□□ -1.36
CAPN7-201ENST00000253693 KRTAP23-1A1A580 65 aa6.48□□□□□ -1.37
CAPN7-201ENST00000253693 SPRR2GQ9BYE4 73 aa6.48□□□□□ -1.37
CAPN7-201ENST00000253693 MUC17Q685J3 4493 aa6.45□□□□□ -1.38
CAPN7-201ENST00000253693 MT2AP02795 61 aa6.43□□□□□ -1.38
CAPN7-201ENST00000253693 LCE2CQ5TA81 110 aa6.42□□□□□ -1.38
CAPN7-201ENST00000253693 MUC2Q02817 5179 aa6.38□□□□□ -1.39
CAPN7-201ENST00000253693 MT1FP04733 61 aa6.38□□□□□ -1.39
CAPN7-201ENST00000253693 FLGP20930 4061 aaPredicted RBP6.38□□□□□ -1.39
CAPN7-201ENST00000253693 PCLOQ9Y6V0 5065 aa6.37□□□□□ -1.39
CAPN7-201ENST00000253693 KRTAP19-1Q8IUB9 90 aa6.33□□□□□ -1.4
CAPN7-201ENST00000253693 LCE3AQ5TA76 89 aa6.32□□□□□ -1.4
CAPN7-201ENST00000253693 HMCN2Q8NDA2 5059 aa6.3□□□□□ -1.4
CAPN7-201ENST00000253693 KRTAP10-12P60413 245 aa6.29□□□□□ -1.4
CAPN7-201ENST00000253693 KRTAP9-8Q9BYQ0 159 aa6.21□□□□□ -1.42
CAPN7-201ENST00000253693 RNF213Q63HN8 5207 aa6.18□□□□□ -1.42
CAPN7-201ENST00000253693 KRTAP12-3P60328 96 aa6.17□□□□□ -1.42
CAPN7-201ENST00000253693 FAT4Q6V0I7 4981 aa6.17□□□□□ -1.42
CAPN7-201ENST00000253693 KRTAP19-8Q3LI54 63 aa6.16□□□□□ -1.42
CAPN7-201ENST00000253693 UBR4Q5T4S7 5183 aa6.12□□□□□ -1.43
CAPN7-201ENST00000253693 MT1BP07438 61 aa6.04□□□□□ -1.44
CAPN7-201ENST00000253693 KRTAP8-1Q8IUC2 63 aa6.01□□□□□ -1.45
CAPN7-201ENST00000253693 MT1XP80297 61 aa5.99□□□□□ -1.45
CAPN7-201ENST00000253693 KRTAP9-3Q9BYQ3 159 aa5.97□□□□□ -1.45
CAPN7-201ENST00000253693 KRTAP10-5P60370 271 aa5.97□□□□□ -1.45
CAPN7-201ENST00000253693 KRTAP10-7P60409 375 aaPredicted RBP5.9□□□□□ -1.47
CAPN7-201ENST00000253693 SPRR5A0A1B0GTR4 108 aa5.8□□□□□ -1.48
CAPN7-201ENST00000253693 KRTAP19-5Q3LI72 72 aa5.78□□□□□ -1.48
CAPN7-201ENST00000253693 LCE2BO14633 110 aa5.76□□□□□ -1.49
CAPN7-201ENST00000253693 INE1O15225 51 aa5.65□□□□□ -1.5
CAPN7-201ENST00000253693 LCE3CQ5T5A8 94 aa5.64□□□□□ -1.51
CAPN7-201ENST00000253693 LCE2AQ5TA79 106 aaPredicted RBP5.64□□□□□ -1.51
CAPN7-201ENST00000253693 KRTAP4-8A0A0G2JLE6 195 aa5.6□□□□□ -1.51
CAPN7-201ENST00000253693 KRTAP4-8Q9BYQ9 185 aa5.6□□□□□ -1.51
CAPN7-201ENST00000253693 KRTAP19-4Q3LI73 84 aa5.49□□□□□ -1.53
CAPN7-201ENST00000253693 CRCT1Q9UGL9 99 aa5.43□□□□□ -1.54
CAPN7-201ENST00000253693 FSIP2Q5CZC0 6907 aa5.4□□□□□ -1.55
CAPN7-201ENST00000253693 USH2AO75445 5202 aa5.39□□□□□ -1.55
CAPN7-201ENST00000253693 KRTAP19-6Q3LI70 58 aa5.27□□□□□ -1.57
CAPN7-201ENST00000253693 MT1EP04732 61 aa5.27□□□□□ -1.57
CAPN7-201ENST00000253693 SPRR2FQ96RM1 72 aa5.26□□□□□ -1.57
CAPN7-201ENST00000253693 KRTAP4-7Q9BYR0 210 aa5.26□□□□□ -1.57
CAPN7-201ENST00000253693 MT1LQ93083 61 aa5.26□□□□□ -1.57
CAPN7-201ENST00000253693 KRTAP19-7Q3SYF9 63 aa5.26□□□□□ -1.57
CAPN7-201ENST00000253693 KMT2DO14686 5537 aa5.22□□□□□ -1.57
CAPN7-201ENST00000253693 MT1GP13640 62 aa5.15□□□□□ -1.59
CAPN7-201ENST00000253693 KRTAP19-3Q7Z4W3 81 aa5.09□□□□□ -1.6
CAPN7-201ENST00000253693 LCE2DQ5TA82 110 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms