RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 KRTAP13-4Q3LI77 160 aa8.01□□□□□ -1.13
ACTN4-201ENST00000252699 STARD9Q9P2P6 4700 aa8□□□□□ -1.13
ACTN4-201ENST00000252699 PRKDCP78527 4128 aaKnown RBP7.98□□□□□ -1.13
ACTN4-201ENST00000252699 DNAH10Q8IVF4 4471 aa7.96□□□□□ -1.14
ACTN4-201ENST00000252699 KRTAP3-3Q9BYR6 98 aa7.95□□□□□ -1.14
ACTN4-201ENST00000252699 DNAH17Q9UFH2 4485 aa7.92□□□□□ -1.14
ACTN4-201ENST00000252699 DYNC1H1Q14204 4646 aaKnown RBP7.92□□□□□ -1.14
ACTN4-201ENST00000252699 FAT1Q14517 4588 aa7.88□□□□□ -1.15
ACTN4-201ENST00000252699 KRTAP3-2Q9BYR7 98 aa7.87□□□□□ -1.15
ACTN4-201ENST00000252699 ANK2Q01484 3957 aa7.87□□□□□ -1.15
ACTN4-201ENST00000252699 LRP1BQ9NZR2 4599 aa7.85□□□□□ -1.15
ACTN4-201ENST00000252699 DNAH2Q9P225 4427 aa7.76□□□□□ -1.17
ACTN4-201ENST00000252699 RYR1P21817 5038 aa7.75□□□□□ -1.17
ACTN4-201ENST00000252699 KMT2AQ03164 3969 aa7.67□□□□□ -1.18
ACTN4-201ENST00000252699 KIAA1109Q2LD37 5005 aa7.65□□□□□ -1.18
ACTN4-201ENST00000252699 DYNC2H1Q8NCM8 4307 aaKnown RBP7.65□□□□□ -1.18
ACTN4-201ENST00000252699 DNAH3Q8TD57 4116 aa7.63□□□□□ -1.19
ACTN4-201ENST00000252699 FAT2Q9NYQ8 4349 aa7.61□□□□□ -1.19
ACTN4-201ENST00000252699 DNAH8Q96JB1 4490 aa7.59□□□□□ -1.2
ACTN4-201ENST00000252699 SACSQ9NZJ4 4579 aa7.57□□□□□ -1.2
ACTN4-201ENST00000252699 KRTAP4-1Q9BYQ7 146 aa7.56□□□□□ -1.2
ACTN4-201ENST00000252699 LYSTQ99698 3801 aa7.53□□□□□ -1.2
ACTN4-201ENST00000252699 RYR3Q15413 4870 aa7.52□□□□□ -1.2
ACTN4-201ENST00000252699 LORP23490 312 aaPredicted RBP7.51□□□□□ -1.21
ACTN4-201ENST00000252699 CMYA5Q8N3K9 4069 aa7.5□□□□□ -1.21
ACTN4-201ENST00000252699 KRTAP17-1Q9BYP8 105 aa7.43□□□□□ -1.22
ACTN4-201ENST00000252699 VPS13BQ7Z7G8 4022 aa7.42□□□□□ -1.22
ACTN4-201ENST00000252699 APOBP04114 4563 aaKnown RBP7.39□□□□□ -1.23
ACTN4-201ENST00000252699 MYCBP2O75592 4640 aa7.38□□□□□ -1.23
ACTN4-201ENST00000252699 KRTAP15-1Q3LI76 137 aa7.35□□□□□ -1.23
ACTN4-201ENST00000252699 RYR2Q92736 4967 aa7.33□□□□□ -1.24
ACTN4-201ENST00000252699 KRTAP10-12P60413 245 aa7.32□□□□□ -1.24
ACTN4-201ENST00000252699 LRP1Q07954 4544 aaKnown RBP7.3□□□□□ -1.24
ACTN4-201ENST00000252699 MT1HP80294 61 aa7.27□□□□□ -1.25
ACTN4-201ENST00000252699 DNAH6Q9C0G6 4158 aa7.27□□□□□ -1.25
ACTN4-201ENST00000252699 HYDINQ4G0P3 5121 aa7.23□□□□□ -1.25
ACTN4-201ENST00000252699 DNAH7Q8WXX0 4024 aa7.22□□□□□ -1.25
ACTN4-201ENST00000252699 HECTD4Q9Y4D8 3996 aa7.2□□□□□ -1.26
ACTN4-201ENST00000252699 FAT3Q8TDW7 4589 aa7.18□□□□□ -1.26
ACTN4-201ENST00000252699 HERC2O95714 4834 aa7.17□□□□□ -1.26
ACTN4-201ENST00000252699 MT2AP02795 61 aa7.15□□□□□ -1.26
ACTN4-201ENST00000252699 FRAS1Q86XX4 4008 aa7.13□□□□□ -1.27
ACTN4-201ENST00000252699 KRTAP12-3P60328 96 aa7.11□□□□□ -1.27
ACTN4-201ENST00000252699 LCE3AQ5TA76 89 aa7.1□□□□□ -1.27
ACTN4-201ENST00000252699 PKHD1P08F94 4074 aa7.07□□□□□ -1.28
ACTN4-201ENST00000252699 KRTAP23-1A1A580 65 aa7.07□□□□□ -1.28
ACTN4-201ENST00000252699 SPRR2GQ9BYE4 73 aa7.04□□□□□ -1.28
ACTN4-201ENST00000252699 BIRC6Q9NR09 4857 aa7.04□□□□□ -1.28
ACTN4-201ENST00000252699 MT1FP04733 61 aa7.03□□□□□ -1.28
ACTN4-201ENST00000252699 KMT2CQ8NEZ4 4911 aaKnown RBP7□□□□□ -1.29
ACTN4-201ENST00000252699 HSPG2P98160 4391 aa6.99□□□□□ -1.29
ACTN4-201ENST00000252699 LRP2P98164 4655 aa6.96□□□□□ -1.3
ACTN4-201ENST00000252699 PKD1P98161 4303 aa6.87□□□□□ -1.31
ACTN4-201ENST00000252699 CRCT1Q9UGL9 99 aa6.85□□□□□ -1.31
ACTN4-201ENST00000252699 KRTAP8-1Q8IUC2 63 aa6.83□□□□□ -1.32
ACTN4-201ENST00000252699 PCLOQ9Y6V0 5065 aa6.77□□□□□ -1.33
ACTN4-201ENST00000252699 KRTAP19-1Q8IUB9 90 aa6.75□□□□□ -1.33
ACTN4-201ENST00000252699 HERC1Q15751 4861 aa6.74□□□□□ -1.33
ACTN4-201ENST00000252699 INE1O15225 51 aa6.72□□□□□ -1.33
ACTN4-201ENST00000252699 EPPK1P58107 5090 aaKnown RBP6.7□□□□□ -1.34
ACTN4-201ENST00000252699 LCE2CQ5TA81 110 aa6.67□□□□□ -1.34
ACTN4-201ENST00000252699 KRTAP19-8Q3LI54 63 aa6.64□□□□□ -1.35
ACTN4-201ENST00000252699 ABCA13Q86UQ4 5058 aa6.62□□□□□ -1.35
ACTN4-201ENST00000252699 LPAP08519 4548 aa6.62□□□□□ -1.35
ACTN4-201ENST00000252699 KRTAP9-8Q9BYQ0 159 aa6.61□□□□□ -1.35
ACTN4-201ENST00000252699 KRTAP19-5Q3LI72 72 aa6.5□□□□□ -1.37
ACTN4-201ENST00000252699 TNXBP22105 4242 aa6.5□□□□□ -1.37
ACTN4-201ENST00000252699 KRTAP19-2Q3LHN2 52 aa6.49□□□□□ -1.37
ACTN4-201ENST00000252699 MT1BP07438 61 aa6.48□□□□□ -1.37
ACTN4-201ENST00000252699 PKHD1L1Q86WI1 4243 aa6.48□□□□□ -1.37
ACTN4-201ENST00000252699 KRTAP10-7P60409 375 aaPredicted RBP6.45□□□□□ -1.38
ACTN4-201ENST00000252699 MT1XP80297 61 aa6.44□□□□□ -1.38
ACTN4-201ENST00000252699 SPRR2FQ96RM1 72 aa6.43□□□□□ -1.38
ACTN4-201ENST00000252699 KRTAP9-3Q9BYQ3 159 aa6.42□□□□□ -1.38
ACTN4-201ENST00000252699 KRTAP10-5P60370 271 aa6.39□□□□□ -1.39
ACTN4-201ENST00000252699 MUC17Q685J3 4493 aa6.34□□□□□ -1.39
ACTN4-201ENST00000252699 LCE3CQ5T5A8 94 aa6.29□□□□□ -1.4
ACTN4-201ENST00000252699 FLGP20930 4061 aaPredicted RBP6.23□□□□□ -1.41
ACTN4-201ENST00000252699 RNF213Q63HN8 5207 aa6.2□□□□□ -1.42
ACTN4-201ENST00000252699 LCE2BO14633 110 aa6.19□□□□□ -1.42
ACTN4-201ENST00000252699 UBR4Q5T4S7 5183 aa6.18□□□□□ -1.42
ACTN4-201ENST00000252699 KRTAP4-8A0A0G2JLE6 195 aa6.17□□□□□ -1.42
ACTN4-201ENST00000252699 KRTAP19-4Q3LI73 84 aa6.17□□□□□ -1.42
ACTN4-201ENST00000252699 KRTAP4-8Q9BYQ9 185 aa6.17□□□□□ -1.42
ACTN4-201ENST00000252699 FAT4Q6V0I7 4981 aa6.16□□□□□ -1.42
ACTN4-201ENST00000252699 HMCN2Q8NDA2 5059 aa6.06□□□□□ -1.44
ACTN4-201ENST00000252699 FSIP2Q5CZC0 6907 aa6.02□□□□□ -1.45
ACTN4-201ENST00000252699 SPRR2EP22531 72 aa5.99□□□□□ -1.45
ACTN4-201ENST00000252699 SPRR2BP35325 72 aa5.99□□□□□ -1.45
ACTN4-201ENST00000252699 SPRR2AP35326 72 aa5.99□□□□□ -1.45
ACTN4-201ENST00000252699 LCE2AQ5TA79 106 aaPredicted RBP5.98□□□□□ -1.45
ACTN4-201ENST00000252699 MUC2Q02817 5179 aa5.92□□□□□ -1.46
ACTN4-201ENST00000252699 MT1GP13640 62 aa5.9□□□□□ -1.47
ACTN4-201ENST00000252699 SPRR5A0A1B0GTR4 108 aa5.82□□□□□ -1.48
ACTN4-201ENST00000252699 KRTAP19-6Q3LI70 58 aa5.82□□□□□ -1.48
ACTN4-201ENST00000252699 SPRR2DP22532 72 aa5.78□□□□□ -1.48
ACTN4-201ENST00000252699 MT1EP04732 61 aa5.76□□□□□ -1.49
ACTN4-201ENST00000252699 KRTAP9-2Q9BYQ4 174 aa5.75□□□□□ -1.49
ACTN4-201ENST00000252699 KRTAP19-3Q7Z4W3 81 aa5.75□□□□□ -1.49
ACTN4-201ENST00000252699 MT1LQ93083 61 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 193 ms