RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 MYCBP2O75592 4640 aa10.15□□□□□ -0.79
CDC42EP1-201ENST00000249014 MT1HL1P0DM35 61 aa10.13□□□□□ -0.79
CDC42EP1-201ENST00000249014 H0YAA0 97 aa10.1□□□□□ -0.79
CDC42EP1-201ENST00000249014 EPPK1P58107 5090 aaKnown RBP10.07□□□□□ -0.8
CDC42EP1-201ENST00000249014 A0A1B0GU33 70 aa10.06□□□□□ -0.8
CDC42EP1-201ENST00000249014 H1FX-AS1Q4G0G2 97 aa10.04□□□□□ -0.8
CDC42EP1-201ENST00000249014 ADM2Q7Z4H4 148 aa10.04□□□□□ -0.8
CDC42EP1-201ENST00000249014 PRAC1Q96KF2 57 aa10.01□□□□□ -0.81
CDC42EP1-201ENST00000249014 KRTAP3-3Q9BYR6 98 aa10.01□□□□□ -0.81
CDC42EP1-201ENST00000249014 LPAP08519 4548 aa9.89□□□□□ -0.83
CDC42EP1-201ENST00000249014 S4R3F8 94 aa9.88□□□□□ -0.83
CDC42EP1-201ENST00000249014 KRTAP10-6P60371 365 aaPredicted RBP9.87□□□□□ -0.83
CDC42EP1-201ENST00000249014 LRP2P98164 4655 aa9.85□□□□□ -0.83
CDC42EP1-201ENST00000249014 TPRXLQ17RH7 258 aa9.83□□□□□ -0.84
CDC42EP1-201ENST00000249014 KRTAP3-2Q9BYR7 98 aa9.81□□□□□ -0.84
CDC42EP1-201ENST00000249014 KRTAP4-5Q9BYR2 181 aa9.81□□□□□ -0.84
CDC42EP1-201ENST00000249014 KRTAP13-4Q3LI77 160 aa9.75□□□□□ -0.85
CDC42EP1-201ENST00000249014 ABCA13Q86UQ4 5058 aa9.75□□□□□ -0.85
CDC42EP1-201ENST00000249014 CSAG1Q6PB30 78 aa9.73□□□□□ -0.85
CDC42EP1-201ENST00000249014 LINC01554Q52M75 96 aa9.72□□□□□ -0.85
CDC42EP1-201ENST00000249014 P0C880 135 aa9.69□□□□□ -0.86
CDC42EP1-201ENST00000249014 K7ERS5 55 aa9.63□□□□□ -0.87
CDC42EP1-201ENST00000249014 A0A0D9SG42 100 aa9.61□□□□□ -0.87
CDC42EP1-201ENST00000249014 BIRC6Q9NR09 4857 aa9.57□□□□□ -0.88
CDC42EP1-201ENST00000249014 KRTAP25-1Q3LHN0 102 aa9.48□□□□□ -0.89
CDC42EP1-201ENST00000249014 HERC2O95714 4834 aa9.47□□□□□ -0.89
CDC42EP1-201ENST00000249014 MUC17Q685J3 4493 aa9.45□□□□□ -0.9
CDC42EP1-201ENST00000249014 SEC61BP60468 96 aaKnown RBP9.44□□□□□ -0.9
CDC42EP1-201ENST00000249014 ROMO1P60602 79 aa9.44□□□□□ -0.9
CDC42EP1-201ENST00000249014 CRIPTQ9P021 101 aa9.43□□□□□ -0.9
CDC42EP1-201ENST00000249014 J3QL48 77 aa9.41□□□□□ -0.9
CDC42EP1-201ENST00000249014 KRTAP12-2P59991 146 aa9.4□□□□□ -0.9
CDC42EP1-201ENST00000249014 KRTAP4-1Q9BYQ7 146 aa9.4□□□□□ -0.9
CDC42EP1-201ENST00000249014 H3BS24 57 aa9.34□□□□□ -0.91
CDC42EP1-201ENST00000249014 KRTAP12-1P59990 96 aa9.34□□□□□ -0.91
CDC42EP1-201ENST00000249014 M0QZ58 72 aa9.33□□□□□ -0.92
CDC42EP1-201ENST00000249014 SPINT4Q6UDR6 99 aa9.29□□□□□ -0.92
CDC42EP1-201ENST00000249014 KRTAP19-2Q3LHN2 52 aa9.23□□□□□ -0.93
CDC42EP1-201ENST00000249014 R4GN34 69 aa9.16□□□□□ -0.94
CDC42EP1-201ENST00000249014 LORP23490 312 aaPredicted RBP9.15□□□□□ -0.94
CDC42EP1-201ENST00000249014 C10orf95Q9H7T3 257 aa9.14□□□□□ -0.95
CDC42EP1-201ENST00000249014 PCLOQ9Y6V0 5065 aa9.1□□□□□ -0.95
CDC42EP1-201ENST00000249014 MUC2Q02817 5179 aa9.08□□□□□ -0.96
CDC42EP1-201ENST00000249014 HERC1Q15751 4861 aa9.05□□□□□ -0.96
CDC42EP1-201ENST00000249014 HMCN2Q8NDA2 5059 aa8.96□□□□□ -0.97
CDC42EP1-201ENST00000249014 FLGP20930 4061 aaPredicted RBP8.92□□□□□ -0.98
CDC42EP1-201ENST00000249014 LCE2CQ5TA81 110 aa8.72□□□□□ -1.01
CDC42EP1-201ENST00000249014 CAMK2N1Q7Z7J9 78 aa8.66□□□□□ -1.02
CDC42EP1-201ENST00000249014 FAT4Q6V0I7 4981 aa8.66□□□□□ -1.02
CDC42EP1-201ENST00000249014 KRTAP15-1Q3LI76 137 aa8.62□□□□□ -1.03
CDC42EP1-201ENST00000249014 UBR4Q5T4S7 5183 aa8.56□□□□□ -1.04
CDC42EP1-201ENST00000249014 RNF213Q63HN8 5207 aa8.54□□□□□ -1.04
CDC42EP1-201ENST00000249014 MT1HP80294 61 aa8.48□□□□□ -1.05
CDC42EP1-201ENST00000249014 M0R2T5 61 aa8.45□□□□□ -1.06
CDC42EP1-201ENST00000249014 SPRR2GQ9BYE4 73 aa8.44□□□□□ -1.06
CDC42EP1-201ENST00000249014 KRTAP19-1Q8IUB9 90 aa8.42□□□□□ -1.06
CDC42EP1-201ENST00000249014 NDUFAF8A1L188 74 aa8.4□□□□□ -1.06
CDC42EP1-201ENST00000249014 PP632Q6XCG6 107 aa8.39□□□□□ -1.07
CDC42EP1-201ENST00000249014 PLAC4Q8WY50 150 aa8.32□□□□□ -1.08
CDC42EP1-201ENST00000249014 TNP1P09430 55 aa8.32□□□□□ -1.08
CDC42EP1-201ENST00000249014 MT2AP02795 61 aa8.31□□□□□ -1.08
CDC42EP1-201ENST00000249014 MT1FP04733 61 aa8.31□□□□□ -1.08
CDC42EP1-201ENST00000249014 KRTAP9-8Q9BYQ0 159 aa8.28□□□□□ -1.08
CDC42EP1-201ENST00000249014 A0A0A0MQY5 61 aa8.27□□□□□ -1.09
CDC42EP1-201ENST00000249014 KRTAP10-10P60014 251 aa8.26□□□□□ -1.09
CDC42EP1-201ENST00000249014 KRTAP23-1A1A580 65 aa8.17□□□□□ -1.1
CDC42EP1-201ENST00000249014 KRTAP19-8Q3LI54 63 aa8.08□□□□□ -1.12
CDC42EP1-201ENST00000249014 MT1BP07438 61 aa8.01□□□□□ -1.13
CDC42EP1-201ENST00000249014 LCE3AQ5TA76 89 aa7.94□□□□□ -1.14
CDC42EP1-201ENST00000249014 KRTAP9-3Q9BYQ3 159 aa7.93□□□□□ -1.14
CDC42EP1-201ENST00000249014 KRTAP10-5P60370 271 aa7.92□□□□□ -1.14
CDC42EP1-201ENST00000249014 MT1XP80297 61 aa7.91□□□□□ -1.14
CDC42EP1-201ENST00000249014 LUZP6Q538Z0 58 aa7.84□□□□□ -1.15
CDC42EP1-201ENST00000249014 SPRR5A0A1B0GTR4 108 aa7.81□□□□□ -1.16
CDC42EP1-201ENST00000249014 KRTAP8-1Q8IUC2 63 aa7.74□□□□□ -1.17
CDC42EP1-201ENST00000249014 KRTAP10-7P60409 375 aaPredicted RBP7.68□□□□□ -1.18
CDC42EP1-201ENST00000249014 KRTAP10-12P60413 245 aa7.67□□□□□ -1.18
CDC42EP1-201ENST00000249014 LCE2AQ5TA79 106 aaPredicted RBP7.67□□□□□ -1.18
CDC42EP1-201ENST00000249014 LCE2BO14633 110 aa7.65□□□□□ -1.18
CDC42EP1-201ENST00000249014 PRO2289Q9P1D8 64 aa7.58□□□□□ -1.2
CDC42EP1-201ENST00000249014 KRTAP12-3P60328 96 aa7.56□□□□□ -1.2
CDC42EP1-201ENST00000249014 USH2AO75445 5202 aa7.49□□□□□ -1.21
CDC42EP1-201ENST00000249014 KRTAP19-5Q3LI72 72 aa7.32□□□□□ -1.24
CDC42EP1-201ENST00000249014 KMT2DO14686 5537 aa7.28□□□□□ -1.24
CDC42EP1-201ENST00000249014 KRTAP4-8A0A0G2JLE6 195 aa7.26□□□□□ -1.25
CDC42EP1-201ENST00000249014 KRTAP4-8Q9BYQ9 185 aa7.26□□□□□ -1.25
CDC42EP1-201ENST00000249014 LCE3CQ5T5A8 94 aa7.11□□□□□ -1.27
CDC42EP1-201ENST00000249014 LCE2DQ5TA82 110 aaPredicted RBP7.09□□□□□ -1.27
CDC42EP1-201ENST00000249014 KRTAP19-7Q3SYF9 63 aa7.06□□□□□ -1.28
CDC42EP1-201ENST00000249014 SSPOA2VEC9 5147 aa7.05□□□□□ -1.28
CDC42EP1-201ENST00000249014 KRTAP9-2Q9BYQ4 174 aa6.94□□□□□ -1.3
CDC42EP1-201ENST00000249014 KRTAP19-6Q3LI70 58 aa6.89□□□□□ -1.31
CDC42EP1-201ENST00000249014 KRTAP9-6A8MVA2 160 aa6.88□□□□□ -1.31
CDC42EP1-201ENST00000249014 KRTAP4-7Q9BYR0 210 aa6.87□□□□□ -1.31
CDC42EP1-201ENST00000249014 FSIP2Q5CZC0 6907 aa6.87□□□□□ -1.31
CDC42EP1-201ENST00000249014 INE1O15225 51 aa6.86□□□□□ -1.31
CDC42EP1-201ENST00000249014 MT1EP04732 61 aa6.85□□□□□ -1.31
CDC42EP1-201ENST00000249014 MT1LQ93083 61 aa6.82□□□□□ -1.32
CDC42EP1-201ENST00000249014 KRTAP19-4Q3LI73 84 aa6.72□□□□□ -1.33
CDC42EP1-201ENST00000249014 CRCT1Q9UGL9 99 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms