RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 COX6B2Q6YFQ2 88 aa9.08□□□□□ -0.96
LRFN3-201ENST00000246529 PRAC1Q96KF2 57 aa9.07□□□□□ -0.96
LRFN3-201ENST00000246529 XP32Q5T750 250 aa9.06□□□□□ -0.96
LRFN3-201ENST00000246529 RPL37P61927 97 aaKnown RBP9.04□□□□□ -0.96
LRFN3-201ENST00000246529 EPPK1P58107 5090 aaKnown RBP9.04□□□□□ -0.96
LRFN3-201ENST00000246529 MT1HL1P0DM35 61 aa9.03□□□□□ -0.96
LRFN3-201ENST00000246529 ADM2Q7Z4H4 148 aa9.01□□□□□ -0.97
LRFN3-201ENST00000246529 H0YAA0 97 aa8.96□□□□□ -0.97
LRFN3-201ENST00000246529 LINC01554Q52M75 96 aa8.95□□□□□ -0.98
LRFN3-201ENST00000246529 A0A1B0GU33 70 aa8.93□□□□□ -0.98
LRFN3-201ENST00000246529 LPAP08519 4548 aa8.91□□□□□ -0.98
LRFN3-201ENST00000246529 H1FX-AS1Q4G0G2 97 aa8.9□□□□□ -0.99
LRFN3-201ENST00000246529 KRTAP3-3Q9BYR6 98 aa8.89□□□□□ -0.99
LRFN3-201ENST00000246529 LRP2P98164 4655 aa8.86□□□□□ -0.99
LRFN3-201ENST00000246529 ABCA13Q86UQ4 5058 aa8.82□□□□□ -1
LRFN3-201ENST00000246529 KRTAP4-5Q9BYR2 181 aa8.81□□□□□ -1
LRFN3-201ENST00000246529 S4R3F8 94 aa8.79□□□□□ -1
LRFN3-201ENST00000246529 CSAG1Q6PB30 78 aa8.76□□□□□ -1.01
LRFN3-201ENST00000246529 KRTAP10-6P60371 365 aaPredicted RBP8.75□□□□□ -1.01
LRFN3-201ENST00000246529 J3QL48 77 aa8.74□□□□□ -1.01
LRFN3-201ENST00000246529 TPRXLQ17RH7 258 aa8.72□□□□□ -1.01
LRFN3-201ENST00000246529 KRTAP3-2Q9BYR7 98 aa8.71□□□□□ -1.02
LRFN3-201ENST00000246529 KRTAP13-4Q3LI77 160 aa8.68□□□□□ -1.02
LRFN3-201ENST00000246529 P0C880 135 aa8.63□□□□□ -1.03
LRFN3-201ENST00000246529 A0A0D9SG42 100 aa8.6□□□□□ -1.03
LRFN3-201ENST00000246529 K7ERS5 55 aa8.53□□□□□ -1.04
LRFN3-201ENST00000246529 HERC2O95714 4834 aa8.51□□□□□ -1.05
LRFN3-201ENST00000246529 KRTAP25-1Q3LHN0 102 aa8.49□□□□□ -1.05
LRFN3-201ENST00000246529 CRIPTQ9P021 101 aa8.45□□□□□ -1.06
LRFN3-201ENST00000246529 MUC17Q685J3 4493 aa8.44□□□□□ -1.06
LRFN3-201ENST00000246529 KRTAP4-1Q9BYQ7 146 aa8.41□□□□□ -1.06
LRFN3-201ENST00000246529 SEC61BP60468 96 aaKnown RBP8.39□□□□□ -1.07
LRFN3-201ENST00000246529 ROMO1P60602 79 aa8.39□□□□□ -1.07
LRFN3-201ENST00000246529 KRTAP12-2P59991 146 aa8.37□□□□□ -1.07
LRFN3-201ENST00000246529 SPINT4Q6UDR6 99 aa8.3□□□□□ -1.08
LRFN3-201ENST00000246529 KRTAP12-1P59990 96 aa8.29□□□□□ -1.08
LRFN3-201ENST00000246529 BIRC6Q9NR09 4857 aa8.29□□□□□ -1.08
LRFN3-201ENST00000246529 M0QZ58 72 aa8.25□□□□□ -1.09
LRFN3-201ENST00000246529 MUC2Q02817 5179 aa8.24□□□□□ -1.09
LRFN3-201ENST00000246529 KRTAP19-2Q3LHN2 52 aa8.2□□□□□ -1.1
LRFN3-201ENST00000246529 LORP23490 312 aaPredicted RBP8.18□□□□□ -1.1
LRFN3-201ENST00000246529 HERC1Q15751 4861 aa8.17□□□□□ -1.1
LRFN3-201ENST00000246529 C10orf95Q9H7T3 257 aa8.15□□□□□ -1.1
LRFN3-201ENST00000246529 R4GN34 69 aa8.15□□□□□ -1.1
LRFN3-201ENST00000246529 PCLOQ9Y6V0 5065 aa8.12□□□□□ -1.11
LRFN3-201ENST00000246529 HMCN2Q8NDA2 5059 aa8.04□□□□□ -1.12
LRFN3-201ENST00000246529 FLGP20930 4061 aaPredicted RBP7.96□□□□□ -1.14
LRFN3-201ENST00000246529 FAT4Q6V0I7 4981 aa7.88□□□□□ -1.15
LRFN3-201ENST00000246529 LUZP6Q538Z0 58 aa7.87□□□□□ -1.15
LRFN3-201ENST00000246529 KRTAP15-1Q3LI76 137 aa7.85□□□□□ -1.15
LRFN3-201ENST00000246529 NDUFAF8A1L188 74 aa7.79□□□□□ -1.16
LRFN3-201ENST00000246529 LCE2CQ5TA81 110 aa7.78□□□□□ -1.16
LRFN3-201ENST00000246529 CAMK2N1Q7Z7J9 78 aa7.73□□□□□ -1.17
LRFN3-201ENST00000246529 UBR4Q5T4S7 5183 aa7.72□□□□□ -1.17
LRFN3-201ENST00000246529 RNF213Q63HN8 5207 aa7.72□□□□□ -1.17
LRFN3-201ENST00000246529 M0R2T5 61 aa7.59□□□□□ -1.19
LRFN3-201ENST00000246529 MT1HP80294 61 aa7.57□□□□□ -1.2
LRFN3-201ENST00000246529 KRTAP19-1Q8IUB9 90 aa7.49□□□□□ -1.21
LRFN3-201ENST00000246529 SPRR2GQ9BYE4 73 aa7.47□□□□□ -1.21
LRFN3-201ENST00000246529 MT1FP04733 61 aa7.43□□□□□ -1.22
LRFN3-201ENST00000246529 MT2AP02795 61 aa7.42□□□□□ -1.22
LRFN3-201ENST00000246529 KRTAP10-10P60014 251 aa7.4□□□□□ -1.23
LRFN3-201ENST00000246529 PP632Q6XCG6 107 aa7.39□□□□□ -1.23
LRFN3-201ENST00000246529 TNP1P09430 55 aa7.38□□□□□ -1.23
LRFN3-201ENST00000246529 PLAC4Q8WY50 150 aa7.37□□□□□ -1.23
LRFN3-201ENST00000246529 KRTAP9-8Q9BYQ0 159 aa7.37□□□□□ -1.23
LRFN3-201ENST00000246529 KRTAP23-1A1A580 65 aa7.16□□□□□ -1.26
LRFN3-201ENST00000246529 KRTAP19-8Q3LI54 63 aa7.16□□□□□ -1.26
LRFN3-201ENST00000246529 MT1BP07438 61 aa7.13□□□□□ -1.27
LRFN3-201ENST00000246529 LCE3AQ5TA76 89 aa7.08□□□□□ -1.28
LRFN3-201ENST00000246529 KRTAP9-3Q9BYQ3 159 aa7.06□□□□□ -1.28
LRFN3-201ENST00000246529 KRTAP10-5P60370 271 aa7.05□□□□□ -1.28
LRFN3-201ENST00000246529 MT1XP80297 61 aa7.04□□□□□ -1.28
LRFN3-201ENST00000246529 SPRR5A0A1B0GTR4 108 aa6.87□□□□□ -1.31
LRFN3-201ENST00000246529 KRTAP10-7P60409 375 aaPredicted RBP6.86□□□□□ -1.31
LRFN3-201ENST00000246529 LCE2BO14633 110 aa6.84□□□□□ -1.31
LRFN3-201ENST00000246529 KRTAP10-12P60413 245 aa6.83□□□□□ -1.32
LRFN3-201ENST00000246529 KRTAP8-1Q8IUC2 63 aa6.83□□□□□ -1.32
LRFN3-201ENST00000246529 USH2AO75445 5202 aa6.83□□□□□ -1.32
LRFN3-201ENST00000246529 LCE2AQ5TA79 106 aaPredicted RBP6.78□□□□□ -1.32
LRFN3-201ENST00000246529 PRO2289Q9P1D8 64 aa6.73□□□□□ -1.33
LRFN3-201ENST00000246529 KRTAP12-3P60328 96 aa6.72□□□□□ -1.33
LRFN3-201ENST00000246529 KMT2DO14686 5537 aa6.61□□□□□ -1.35
LRFN3-201ENST00000246529 KRTAP19-5Q3LI72 72 aa6.53□□□□□ -1.36
LRFN3-201ENST00000246529 KRTAP4-8A0A0G2JLE6 195 aa6.5□□□□□ -1.37
LRFN3-201ENST00000246529 KRTAP4-8Q9BYQ9 185 aa6.5□□□□□ -1.37
LRFN3-201ENST00000246529 SSPOA2VEC9 5147 aa6.34□□□□□ -1.39
LRFN3-201ENST00000246529 FSIP2Q5CZC0 6907 aa6.33□□□□□ -1.4
LRFN3-201ENST00000246529 LCE3CQ5T5A8 94 aa6.31□□□□□ -1.4
LRFN3-201ENST00000246529 INE1O15225 51 aa6.28□□□□□ -1.4
LRFN3-201ENST00000246529 KRTAP19-7Q3SYF9 63 aa6.27□□□□□ -1.41
LRFN3-201ENST00000246529 KRTAP4-7Q9BYR0 210 aa6.18□□□□□ -1.42
LRFN3-201ENST00000246529 KRTAP9-6A8MVA2 160 aa6.13□□□□□ -1.43
LRFN3-201ENST00000246529 KRTAP19-6Q3LI70 58 aa6.12□□□□□ -1.43
LRFN3-201ENST00000246529 MT1EP04732 61 aa6.09□□□□□ -1.43
LRFN3-201ENST00000246529 MT1LQ93083 61 aa6.07□□□□□ -1.44
LRFN3-201ENST00000246529 FCGBPQ9Y6R7 5405 aaPredicted RBP5.94□□□□□ -1.46
LRFN3-201ENST00000246529 LCE2DQ5TA82 110 aaPredicted RBP5.94□□□□□ -1.46
LRFN3-201ENST00000246529 MUC12Q9UKN1 5478 aa5.88□□□□□ -1.47
LRFN3-201ENST00000246529 KRTAP19-4Q3LI73 84 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms