RNA–Protein interactions for RNA: ENST00000245934.11

SYMPK-201, Transcript of symplekin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYMPK, Length 4,195 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-201ENST00000245934 DNAH11Q96DT5 4516 aa6.66□□□□□ -1.34
SYMPK-201ENST00000245934 DNAH2Q9P225 4427 aa6.66□□□□□ -1.34
SYMPK-201ENST00000245934 KRTAP10-8P60410 259 aa6.65□□□□□ -1.35
SYMPK-201ENST00000245934 TPRXLQ17RH7 258 aa6.59□□□□□ -1.35
SYMPK-201ENST00000245934 DNAH5Q8TE73 4624 aa6.53□□□□□ -1.36
SYMPK-201ENST00000245934 KRTAP3-1Q9BYR8 98 aa6.5□□□□□ -1.37
SYMPK-201ENST00000245934 FAT2Q9NYQ8 4349 aa6.49□□□□□ -1.37
SYMPK-201ENST00000245934 FAT1Q14517 4588 aa6.47□□□□□ -1.37
SYMPK-201ENST00000245934 LRP1BQ9NZR2 4599 aa6.46□□□□□ -1.37
SYMPK-201ENST00000245934 KRTAP4-5Q9BYR2 181 aa6.44□□□□□ -1.38
SYMPK-201ENST00000245934 TNP1P09430 55 aa6.42□□□□□ -1.38
SYMPK-201ENST00000245934 PKHD1P08F94 4074 aa6.41□□□□□ -1.38
SYMPK-201ENST00000245934 KRTAP12-2P59991 146 aa6.4□□□□□ -1.38
SYMPK-201ENST00000245934 KRTAP10-4P60372 401 aaPredicted RBP6.4□□□□□ -1.38
SYMPK-201ENST00000245934 HYDINQ4G0P3 5121 aa6.4□□□□□ -1.38
SYMPK-201ENST00000245934 PP632Q6XCG6 107 aa6.4□□□□□ -1.38
SYMPK-201ENST00000245934 DYNC1H1Q14204 4646 aaKnown RBP6.4□□□□□ -1.39
SYMPK-201ENST00000245934 PKD1P98161 4303 aa6.39□□□□□ -1.39
SYMPK-201ENST00000245934 KRTAP10-10P60014 251 aa6.37□□□□□ -1.39
SYMPK-201ENST00000245934 VPS13BQ7Z7G8 4022 aa6.37□□□□□ -1.39
SYMPK-201ENST00000245934 MYCBP2O75592 4640 aa6.33□□□□□ -1.4
SYMPK-201ENST00000245934 MT1HL1P0DM35 61 aa6.33□□□□□ -1.4
SYMPK-201ENST00000245934 KRTAP15-1Q3LI76 137 aa6.31□□□□□ -1.4
SYMPK-201ENST00000245934 KRTAP13-4Q3LI77 160 aa6.28□□□□□ -1.4
SYMPK-201ENST00000245934 SACSQ9NZJ4 4579 aa6.28□□□□□ -1.4
SYMPK-201ENST00000245934 RYR1P21817 5038 aa6.28□□□□□ -1.4
SYMPK-201ENST00000245934 KRTAP12-1P59990 96 aa6.27□□□□□ -1.41
SYMPK-201ENST00000245934 KIAA1109Q2LD37 5005 aa6.26□□□□□ -1.41
SYMPK-201ENST00000245934 PKHD1L1Q86WI1 4243 aa6.21□□□□□ -1.42
SYMPK-201ENST00000245934 KMT2CQ8NEZ4 4911 aaKnown RBP6.19□□□□□ -1.42
SYMPK-201ENST00000245934 KRTAP10-6P60371 365 aaPredicted RBP6.19□□□□□ -1.42
SYMPK-201ENST00000245934 FAT3Q8TDW7 4589 aa6.17□□□□□ -1.42
SYMPK-201ENST00000245934 APOBP04114 4563 aaKnown RBP6.15□□□□□ -1.43
SYMPK-201ENST00000245934 RYR3Q15413 4870 aa6.14□□□□□ -1.43
SYMPK-201ENST00000245934 RYR2Q92736 4967 aa6.14□□□□□ -1.43
SYMPK-201ENST00000245934 LRP1Q07954 4544 aaKnown RBP6.13□□□□□ -1.43
SYMPK-201ENST00000245934 KRTAP3-3Q9BYR6 98 aa6.09□□□□□ -1.44
SYMPK-201ENST00000245934 KRTAP17-1Q9BYP8 105 aa6.07□□□□□ -1.44
SYMPK-201ENST00000245934 TNXBP22105 4242 aa6.06□□□□□ -1.44
SYMPK-201ENST00000245934 KRTAP3-2Q9BYR7 98 aa6.02□□□□□ -1.45
SYMPK-201ENST00000245934 HSPG2P98160 4391 aa5.92□□□□□ -1.46
SYMPK-201ENST00000245934 LORP23490 312 aaPredicted RBP5.92□□□□□ -1.46
SYMPK-201ENST00000245934 EPPK1P58107 5090 aaKnown RBP5.83□□□□□ -1.48
SYMPK-201ENST00000245934 LPAP08519 4548 aa5.83□□□□□ -1.48
SYMPK-201ENST00000245934 LRP2P98164 4655 aa5.83□□□□□ -1.48
SYMPK-201ENST00000245934 KRTAP4-1Q9BYQ7 146 aa5.82□□□□□ -1.48
SYMPK-201ENST00000245934 PRO2289Q9P1D8 64 aa5.82□□□□□ -1.48
SYMPK-201ENST00000245934 HERC2O95714 4834 aa5.78□□□□□ -1.48
SYMPK-201ENST00000245934 INE1O15225 51 aa5.74□□□□□ -1.49
SYMPK-201ENST00000245934 PCLOQ9Y6V0 5065 aa5.67□□□□□ -1.5
SYMPK-201ENST00000245934 ABCA13Q86UQ4 5058 aa5.61□□□□□ -1.51
SYMPK-201ENST00000245934 BIRC6Q9NR09 4857 aa5.58□□□□□ -1.52
SYMPK-201ENST00000245934 KRTAP10-12P60413 245 aa5.45□□□□□ -1.54
SYMPK-201ENST00000245934 LCE3AQ5TA76 89 aa5.44□□□□□ -1.54
SYMPK-201ENST00000245934 FSIP2Q5CZC0 6907 aa5.43□□□□□ -1.54
SYMPK-201ENST00000245934 CRCT1Q9UGL9 99 aa5.43□□□□□ -1.54
SYMPK-201ENST00000245934 MT1HP80294 61 aa5.41□□□□□ -1.54
SYMPK-201ENST00000245934 HERC1Q15751 4861 aa5.38□□□□□ -1.55
SYMPK-201ENST00000245934 MT2AP02795 61 aa5.35□□□□□ -1.55
SYMPK-201ENST00000245934 RNF213Q63HN8 5207 aa5.34□□□□□ -1.55
SYMPK-201ENST00000245934 KRTAP12-3P60328 96 aa5.34□□□□□ -1.55
SYMPK-201ENST00000245934 MUC2Q02817 5179 aa5.34□□□□□ -1.56
SYMPK-201ENST00000245934 MT1FP04733 61 aa5.33□□□□□ -1.56
SYMPK-201ENST00000245934 MUC17Q685J3 4493 aa5.3□□□□□ -1.56
SYMPK-201ENST00000245934 KRTAP23-1A1A580 65 aa5.27□□□□□ -1.57
SYMPK-201ENST00000245934 FLGP20930 4061 aaPredicted RBP5.22□□□□□ -1.57
SYMPK-201ENST00000245934 UBR4Q5T4S7 5183 aa5.2□□□□□ -1.58
SYMPK-201ENST00000245934 FAT4Q6V0I7 4981 aa5.17□□□□□ -1.58
SYMPK-201ENST00000245934 SPRR2GQ9BYE4 73 aa5.15□□□□□ -1.58
SYMPK-201ENST00000245934 KRTAP19-2Q3LHN2 52 aa5.15□□□□□ -1.58
SYMPK-201ENST00000245934 LCE2CQ5TA81 110 aa5.14□□□□□ -1.59
SYMPK-201ENST00000245934 KRTAP19-1Q8IUB9 90 aa5.12□□□□□ -1.59
SYMPK-201ENST00000245934 HMCN2Q8NDA2 5059 aa5.11□□□□□ -1.59
SYMPK-201ENST00000245934 OBSCNQ5VST9 7968 aa5.08□□□□□ -1.6
SYMPK-201ENST00000245934 SPRR5A0A1B0GTR4 108 aa5.06□□□□□ -1.6
SYMPK-201ENST00000245934 KRTAP8-1Q8IUC2 63 aa5.05□□□□□ -1.6
SYMPK-201ENST00000245934 SYNE1Q8NF91 8797 aaKnown RBP5.03□□□□□ -1.6
SYMPK-201ENST00000245934 KRTAP10-7P60409 375 aaPredicted RBP4.97□□□□□ -1.61
SYMPK-201ENST00000245934 KRTAP9-8Q9BYQ0 159 aa4.97□□□□□ -1.61
SYMPK-201ENST00000245934 LCE2DQ5TA82 110 aaPredicted RBP4.96□□□□□ -1.62
SYMPK-201ENST00000245934 KRTAP19-5Q3LI72 72 aa4.95□□□□□ -1.62
SYMPK-201ENST00000245934 KRTAP10-5P60370 271 aa4.93□□□□□ -1.62
SYMPK-201ENST00000245934 KRTAP4-8A0A0G2JLE6 195 aa4.89□□□□□ -1.63
SYMPK-201ENST00000245934 KRTAP4-8Q9BYQ9 185 aa4.89□□□□□ -1.63
SYMPK-201ENST00000245934 MT1BP07438 61 aa4.88□□□□□ -1.63
SYMPK-201ENST00000245934 MT1XP80297 61 aa4.86□□□□□ -1.63
SYMPK-201ENST00000245934 SPRR2FQ96RM1 72 aa4.84□□□□□ -1.64
SYMPK-201ENST00000245934 KRTAP19-8Q3LI54 63 aa4.82□□□□□ -1.64
SYMPK-201ENST00000245934 KRTAP9-3Q9BYQ3 159 aa4.78□□□□□ -1.64
SYMPK-201ENST00000245934 LCE2BO14633 110 aa4.71□□□□□ -1.66
SYMPK-201ENST00000245934 USH2AO75445 5202 aa4.71□□□□□ -1.66
SYMPK-201ENST00000245934 LCE3CQ5T5A8 94 aa4.7□□□□□ -1.66
SYMPK-201ENST00000245934 DSTQ03001 7570 aaKnown RBP4.68□□□□□ -1.66
SYMPK-201ENST00000245934 KRTAP4-7Q9BYR0 210 aa4.64□□□□□ -1.67
SYMPK-201ENST00000245934 FCGBPQ9Y6R7 5405 aaPredicted RBP4.62□□□□□ -1.67
SYMPK-201ENST00000245934 LCE2AQ5TA79 106 aaPredicted RBP4.59□□□□□ -1.67
SYMPK-201ENST00000245934 MT1GP13640 62 aa4.54□□□□□ -1.68
SYMPK-201ENST00000245934 KMT2DO14686 5537 aa4.51□□□□□ -1.69
SYMPK-201ENST00000245934 KRTAP12-4P60329 112 aa4.51□□□□□ -1.69
SYMPK-201ENST00000245934 LCE3BQ5TA77 95 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms