RNA–Protein interactions for RNA: ENST00000245414.8

IRF1-201, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-201ENST00000245414 SEC61BP60468 96 aaKnown RBP5.12□□□□□ -1.59
IRF1-201ENST00000245414 LCE2AQ5TA79 106 aaPredicted RBP5.12□□□□□ -1.59
IRF1-201ENST00000245414 HECTD4Q9Y4D8 3996 aa5.12□□□□□ -1.59
IRF1-201ENST00000245414 LRP1BQ9NZR2 4599 aa5.08□□□□□ -1.6
IRF1-201ENST00000245414 KRTAP12-2P59991 146 aa5.08□□□□□ -1.6
IRF1-201ENST00000245414 FAT2Q9NYQ8 4349 aa5.07□□□□□ -1.6
IRF1-201ENST00000245414 KRTAP10-6P60371 365 aaPredicted RBP5.07□□□□□ -1.6
IRF1-201ENST00000245414 PLAC4Q8WY50 150 aa5.06□□□□□ -1.6
IRF1-201ENST00000245414 PKHD1P08F94 4074 aa5.05□□□□□ -1.6
IRF1-201ENST00000245414 FAT1Q14517 4588 aa5.02□□□□□ -1.61
IRF1-201ENST00000245414 DNAH5Q8TE73 4624 aa5.01□□□□□ -1.61
IRF1-201ENST00000245414 XP32Q5T750 250 aa5□□□□□ -1.61
IRF1-201ENST00000245414 KRTAP1-4P0C5Y4 121 aa4.98□□□□□ -1.61
IRF1-201ENST00000245414 KRTAP12-1P59990 96 aa4.96□□□□□ -1.62
IRF1-201ENST00000245414 VPS13BQ7Z7G8 4022 aa4.96□□□□□ -1.62
IRF1-201ENST00000245414 Q5VSD8 79 aa4.93□□□□□ -1.62
IRF1-201ENST00000245414 MYCBP2O75592 4640 aa4.93□□□□□ -1.62
IRF1-201ENST00000245414 KMT2CQ8NEZ4 4911 aaKnown RBP4.92□□□□□ -1.62
IRF1-201ENST00000245414 SACSQ9NZJ4 4579 aa4.91□□□□□ -1.62
IRF1-201ENST00000245414 KRTAP10-8P60410 259 aa4.9□□□□□ -1.63
IRF1-201ENST00000245414 PKD1P98161 4303 aa4.85□□□□□ -1.63
IRF1-201ENST00000245414 LRP1Q07954 4544 aaKnown RBP4.84□□□□□ -1.63
IRF1-201ENST00000245414 CAMK2N1Q7Z7J9 78 aa4.83□□□□□ -1.64
IRF1-201ENST00000245414 LORP23490 312 aaPredicted RBP4.82□□□□□ -1.64
IRF1-201ENST00000245414 RYR3Q15413 4870 aa4.82□□□□□ -1.64
IRF1-201ENST00000245414 KRTAP17-1Q9BYP8 105 aa4.81□□□□□ -1.64
IRF1-201ENST00000245414 DYNC1H1Q14204 4646 aaKnown RBP4.81□□□□□ -1.64
IRF1-201ENST00000245414 FAT3Q8TDW7 4589 aa4.8□□□□□ -1.64
IRF1-201ENST00000245414 RPS29P62273 56 aaKnown RBP4.8□□□□□ -1.64
IRF1-201ENST00000245414 RYR2Q92736 4967 aa4.8□□□□□ -1.64
IRF1-201ENST00000245414 M0QZ58 72 aa4.8□□□□□ -1.64
IRF1-201ENST00000245414 BIRC6Q9NR09 4857 aa4.79□□□□□ -1.64
IRF1-201ENST00000245414 KRTAP23-1A1A580 65 aa4.76□□□□□ -1.65
IRF1-201ENST00000245414 APOBP04114 4563 aaKnown RBP4.76□□□□□ -1.65
IRF1-201ENST00000245414 KIAA1109Q2LD37 5005 aa4.74□□□□□ -1.65
IRF1-201ENST00000245414 R4GN34 69 aa4.72□□□□□ -1.65
IRF1-201ENST00000245414 RYR1P21817 5038 aa4.65□□□□□ -1.67
IRF1-201ENST00000245414 PP632Q6XCG6 107 aa4.64□□□□□ -1.67
IRF1-201ENST00000245414 PRO2289Q9P1D8 64 aa4.64□□□□□ -1.67
IRF1-201ENST00000245414 EPPK1P58107 5090 aaKnown RBP4.63□□□□□ -1.67
IRF1-201ENST00000245414 HSPG2P98160 4391 aa4.63□□□□□ -1.67
IRF1-201ENST00000245414 LPAP08519 4548 aa4.63□□□□□ -1.67
IRF1-201ENST00000245414 A0A1B0GVY2 172 aa4.62□□□□□ -1.67
IRF1-201ENST00000245414 KRTAP4-5Q9BYR2 181 aa4.61□□□□□ -1.67
IRF1-201ENST00000245414 M0R2T5 61 aa4.6□□□□□ -1.67
IRF1-201ENST00000245414 PKHD1L1Q86WI1 4243 aa4.57□□□□□ -1.68
IRF1-201ENST00000245414 LRP2P98164 4655 aa4.55□□□□□ -1.68
IRF1-201ENST00000245414 ABCA13Q86UQ4 5058 aa4.55□□□□□ -1.68
IRF1-201ENST00000245414 KRTAP10-4P60372 401 aaPredicted RBP4.55□□□□□ -1.68
IRF1-201ENST00000245414 MUC2Q02817 5179 aa4.53□□□□□ -1.68
IRF1-201ENST00000245414 HERC2O95714 4834 aa4.47□□□□□ -1.69
IRF1-201ENST00000245414 INE1O15225 51 aa4.43□□□□□ -1.7
IRF1-201ENST00000245414 PCLOQ9Y6V0 5065 aa4.42□□□□□ -1.7
IRF1-201ENST00000245414 TNXBP22105 4242 aa4.4□□□□□ -1.7
IRF1-201ENST00000245414 TNP1P09430 55 aa4.4□□□□□ -1.7
IRF1-201ENST00000245414 SPRR5A0A1B0GTR4 108 aa4.37□□□□□ -1.71
IRF1-201ENST00000245414 FSIP2Q5CZC0 6907 aa4.33□□□□□ -1.72
IRF1-201ENST00000245414 RNF213Q63HN8 5207 aa4.3□□□□□ -1.72
IRF1-201ENST00000245414 MT1HL1P0DM35 61 aa4.29□□□□□ -1.72
IRF1-201ENST00000245414 FAT4Q6V0I7 4981 aa4.28□□□□□ -1.72
IRF1-201ENST00000245414 HERC1Q15751 4861 aa4.28□□□□□ -1.72
IRF1-201ENST00000245414 UBR4Q5T4S7 5183 aa4.14□□□□□ -1.75
IRF1-201ENST00000245414 KRTAP10-10P60014 251 aa4.09□□□□□ -1.75
IRF1-201ENST00000245414 KRTAP4-1Q9BYQ7 146 aa4.07□□□□□ -1.76
IRF1-201ENST00000245414 KRTAP9-6A0A140TA67 174 aa4.06□□□□□ -1.76
IRF1-201ENST00000245414 HMCN2Q8NDA2 5059 aa4.05□□□□□ -1.76
IRF1-201ENST00000245414 LCE3AQ5TA76 89 aa4.04□□□□□ -1.76
IRF1-201ENST00000245414 MUC17Q685J3 4493 aa4□□□□□ -1.77
IRF1-201ENST00000245414 KRTAP9-2Q9BYQ4 174 aa3.97□□□□□ -1.77
IRF1-201ENST00000245414 OBSCNQ5VST9 7968 aa3.92□□□□□ -1.78
IRF1-201ENST00000245414 USH2AO75445 5202 aa3.89□□□□□ -1.79
IRF1-201ENST00000245414 KRTAP19-2Q3LHN2 52 aa3.85□□□□□ -1.79
IRF1-201ENST00000245414 KRTAP12-3P60328 96 aa3.83□□□□□ -1.8
IRF1-201ENST00000245414 KRTAP8-1Q8IUC2 63 aa3.81□□□□□ -1.8
IRF1-201ENST00000245414 FLGP20930 4061 aaPredicted RBP3.76□□□□□ -1.81
IRF1-201ENST00000245414 KMT2DO14686 5537 aa3.76□□□□□ -1.81
IRF1-201ENST00000245414 CRCT1Q9UGL9 99 aa3.76□□□□□ -1.81
IRF1-201ENST00000245414 KRTAP10-12P60413 245 aa3.75□□□□□ -1.81
IRF1-201ENST00000245414 KRTAP19-1Q8IUB9 90 aa3.68□□□□□ -1.82
IRF1-201ENST00000245414 MT1HP80294 61 aa3.66□□□□□ -1.82
IRF1-201ENST00000245414 SPRR2GQ9BYE4 73 aa3.65□□□□□ -1.82
IRF1-201ENST00000245414 LCE4AQ5TA78 99 aa3.64□□□□□ -1.83
IRF1-201ENST00000245414 DSTQ03001 7570 aaKnown RBP3.63□□□□□ -1.83
IRF1-201ENST00000245414 KRTAP9-4Q9BYQ2 154 aa3.61□□□□□ -1.83
IRF1-201ENST00000245414 MT1FP04733 61 aa3.6□□□□□ -1.83
IRF1-201ENST00000245414 KRTAP9-7A8MTY7 169 aa3.59□□□□□ -1.84
IRF1-201ENST00000245414 SYNE1Q8NF91 8797 aaKnown RBP3.58□□□□□ -1.84
IRF1-201ENST00000245414 LCE3CQ5T5A8 94 aa3.58□□□□□ -1.84
IRF1-201ENST00000245414 MT2AP02795 61 aa3.57□□□□□ -1.84
IRF1-201ENST00000245414 KRTAP10-5P60370 271 aa3.57□□□□□ -1.84
IRF1-201ENST00000245414 KRTAP19-4Q3LI73 84 aa3.57□□□□□ -1.84
IRF1-201ENST00000245414 LCE5AQ5TCM9 118 aa3.54□□□□□ -1.84
IRF1-201ENST00000245414 KRTAP9-9Q9BYP9 154 aa3.52□□□□□ -1.85
IRF1-201ENST00000245414 KRTAP10-7P60409 375 aaPredicted RBP3.51□□□□□ -1.85
IRF1-201ENST00000245414 MT1XP80297 61 aa3.5□□□□□ -1.85
IRF1-201ENST00000245414 KRTAP9-8Q9BYQ0 159 aa3.48□□□□□ -1.85
IRF1-201ENST00000245414 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.47□□□□□ -1.85
IRF1-201ENST00000245414 KRTAP19-5Q3LI72 72 aa3.47□□□□□ -1.85
IRF1-201ENST00000245414 KRTAP9-6A8MVA2 160 aa3.46□□□□□ -1.86
IRF1-201ENST00000245414 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 159.1 ms