RNA–Protein interactions for RNA: ENST00000242848.8

ZC3H13-201, Transcript of zinc finger CCCH-type containing 13, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ZC3H13, Length 8,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H13-201ENST00000242848 LCE2CQ5TA81 110 aa3.26□□□□□ -1.89
ZC3H13-201ENST00000242848 KRTAP12-1P59990 96 aa3.25□□□□□ -1.89
ZC3H13-201ENST00000242848 LCE2DQ5TA82 110 aaPredicted RBP3.2□□□□□ -1.9
ZC3H13-201ENST00000242848 CSMD3Q7Z407 3707 aa3.19□□□□□ -1.9
ZC3H13-201ENST00000242848 BSNQ9UPA5 3926 aa3.16□□□□□ -1.9
ZC3H13-201ENST00000242848 MT1HL1P0DM35 61 aa3.14□□□□□ -1.91
ZC3H13-201ENST00000242848 LCE3AQ5TA76 89 aa3.14□□□□□ -1.91
ZC3H13-201ENST00000242848 AKAP9Q99996 3911 aa3.11□□□□□ -1.91
ZC3H13-201ENST00000242848 MT4P47944 62 aa3.07□□□□□ -1.92
ZC3H13-201ENST00000242848 TRRAPQ9Y4A5 3859 aa3.06□□□□□ -1.92
ZC3H13-201ENST00000242848 SPRR2GQ9BYE4 73 aa3.06□□□□□ -1.92
ZC3H13-201ENST00000242848 KRTAP20-1Q3LI63 56 aa3.04□□□□□ -1.92
ZC3H13-201ENST00000242848 LCE3BQ5TA77 95 aa3.01□□□□□ -1.93
ZC3H13-201ENST00000242848 KRTAP9-6A0A140TA67 174 aa3.01□□□□□ -1.93
ZC3H13-201ENST00000242848 LCE3CQ5T5A8 94 aa2.99□□□□□ -1.93
ZC3H13-201ENST00000242848 LYSTQ99698 3801 aa2.98□□□□□ -1.93
ZC3H13-201ENST00000242848 MT1HP80294 61 aa2.98□□□□□ -1.93
ZC3H13-201ENST00000242848 ALMS1Q8TCU4 4167 aa2.96□□□□□ -1.94
ZC3H13-201ENST00000242848 DNAH1Q9P2D7 4330 aa2.96□□□□□ -1.94
ZC3H13-201ENST00000242848 KRTAP9-2Q9BYQ4 174 aa2.96□□□□□ -1.94
ZC3H13-201ENST00000242848 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
ZC3H13-201ENST00000242848 KRTAP23-1A1A580 65 aa2.92□□□□□ -1.94
ZC3H13-201ENST00000242848 KRTAP3-1Q9BYR8 98 aa2.91□□□□□ -1.94
ZC3H13-201ENST00000242848 LCE1BQ5T7P3 118 aa2.9□□□□□ -1.94
ZC3H13-201ENST00000242848 ZNF469Q96JG9 3925 aaPredicted RBP2.89□□□□□ -1.95
ZC3H13-201ENST00000242848 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
ZC3H13-201ENST00000242848 LCE1EQ5T753 118 aa2.88□□□□□ -1.95
ZC3H13-201ENST00000242848 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
ZC3H13-201ENST00000242848 LCE1AQ5T7P2 110 aa2.88□□□□□ -1.95
ZC3H13-201ENST00000242848 LCE5AQ5TCM9 118 aa2.86□□□□□ -1.95
ZC3H13-201ENST00000242848 KRTAP19-5Q3LI72 72 aa2.86□□□□□ -1.95
ZC3H13-201ENST00000242848 LCE3DQ9BYE3 92 aa2.86□□□□□ -1.95
ZC3H13-201ENST00000242848 LCE1DQ5T752 114 aa2.84□□□□□ -1.96
ZC3H13-201ENST00000242848 KRTAP9-7A8MTY7 169 aa2.83□□□□□ -1.96
ZC3H13-201ENST00000242848 KRTAP19-1Q8IUB9 90 aa2.82□□□□□ -1.96
ZC3H13-201ENST00000242848 MT2AP02795 61 aa2.78□□□□□ -1.96
ZC3H13-201ENST00000242848 RYR1P21817 5038 aa2.78□□□□□ -1.96
ZC3H13-201ENST00000242848 KRTAP3-2Q9BYR7 98 aa2.78□□□□□ -1.96
ZC3H13-201ENST00000242848 MT3P25713 68 aa2.76□□□□□ -1.97
ZC3H13-201ENST00000242848 KRTAP17-1Q9BYP8 105 aa2.76□□□□□ -1.97
ZC3H13-201ENST00000242848 HECTD4Q9Y4D8 3996 aa2.76□□□□□ -1.97
ZC3H13-201ENST00000242848 KMT2AQ03164 3969 aa2.75□□□□□ -1.97
ZC3H13-201ENST00000242848 HUWE1Q7Z6Z7 4374 aaKnown RBP2.74□□□□□ -1.97
ZC3H13-201ENST00000242848 VPS13BQ7Z7G8 4022 aa2.73□□□□□ -1.97
ZC3H13-201ENST00000242848 MT1GP13640 62 aa2.73□□□□□ -1.97
ZC3H13-201ENST00000242848 KRTAP19-4Q3LI73 84 aa2.72□□□□□ -1.97
ZC3H13-201ENST00000242848 FRAS1Q86XX4 4008 aa2.72□□□□□ -1.97
ZC3H13-201ENST00000242848 ANK2Q01484 3957 aa2.71□□□□□ -1.98
ZC3H13-201ENST00000242848 KRTAP3-3Q9BYR6 98 aa2.7□□□□□ -1.98
ZC3H13-201ENST00000242848 KRTAP2-3P0C7H8 128 aa2.69□□□□□ -1.98
ZC3H13-201ENST00000242848 KRTAP2-4Q9BYR9 128 aa2.69□□□□□ -1.98
ZC3H13-201ENST00000242848 LCE2AQ5TA79 106 aaPredicted RBP2.68□□□□□ -1.98
ZC3H13-201ENST00000242848 MT1FP04733 61 aa2.67□□□□□ -1.98
ZC3H13-201ENST00000242848 DNAH7Q8WXX0 4024 aa2.67□□□□□ -1.98
ZC3H13-201ENST00000242848 KRTAP19-6Q3LI70 58 aa2.66□□□□□ -1.98
ZC3H13-201ENST00000242848 FLGP20930 4061 aaPredicted RBP2.62□□□□□ -1.99
ZC3H13-201ENST00000242848 KRTAP19-8Q3LI54 63 aa2.61□□□□□ -1.99
ZC3H13-201ENST00000242848 KRTAP9-9Q9BYP9 154 aa2.61□□□□□ -1.99
ZC3H13-201ENST00000242848 ANK3Q12955 4377 aaKnown RBP2.6□□□□□ -1.99
ZC3H13-201ENST00000242848 KRTAP4-7Q9BYR0 210 aa2.56□□□□□ -2
ZC3H13-201ENST00000242848 CMYA5Q8N3K9 4069 aa2.56□□□□□ -2
ZC3H13-201ENST00000242848 HERC1Q15751 4861 aa2.55□□□□□ -2
ZC3H13-201ENST00000242848 DNAH6Q9C0G6 4158 aa2.55□□□□□ -2
ZC3H13-201ENST00000242848 KRTAP4-1Q9BYQ7 146 aa2.55□□□□□ -2
ZC3H13-201ENST00000242848 LCE4AQ5TA78 99 aa2.52□□□□□ -2.01
ZC3H13-201ENST00000242848 KRTAP2-2Q9BYT5 123 aa2.52□□□□□ -2.01
ZC3H13-201ENST00000242848 KRTAP2-1Q9BYU5 128 aa2.52□□□□□ -2.01
ZC3H13-201ENST00000242848 DNAH2Q9P225 4427 aa2.5□□□□□ -2.01
ZC3H13-201ENST00000242848 KRTAP4-9Q9BYQ8 210 aa2.5□□□□□ -2.01
ZC3H13-201ENST00000242848 KRTAP19-3Q7Z4W3 81 aa2.49□□□□□ -2.01
ZC3H13-201ENST00000242848 LOC100996750A0A140TA64 210 aa2.46□□□□□ -2.02
ZC3H13-201ENST00000242848 FAT2Q9NYQ8 4349 aa2.45□□□□□ -2.02
ZC3H13-201ENST00000242848 PKHD1L1Q86WI1 4243 aa2.44□□□□□ -2.02
ZC3H13-201ENST00000242848 DNAH10Q8IVF4 4471 aa2.44□□□□□ -2.02
ZC3H13-201ENST00000242848 DNAH5Q8TE73 4624 aa2.42□□□□□ -2.02
ZC3H13-201ENST00000242848 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.42□□□□□ -2.02
ZC3H13-201ENST00000242848 PKHD1P08F94 4074 aa2.42□□□□□ -2.02
ZC3H13-201ENST00000242848 DNAH3Q8TD57 4116 aa2.42□□□□□ -2.02
ZC3H13-201ENST00000242848 KRTAP4-8A0A0G2JLE6 195 aa2.4□□□□□ -2.03
ZC3H13-201ENST00000242848 KRTAP4-8Q9BYQ9 185 aa2.4□□□□□ -2.03
ZC3H13-201ENST00000242848 DYNC1H1Q14204 4646 aaKnown RBP2.39□□□□□ -2.03
ZC3H13-201ENST00000242848 DNAH8Q96JB1 4490 aa2.38□□□□□ -2.03
ZC3H13-201ENST00000242848 PLECQ15149 4684 aaKnown RBP2.37□□□□□ -2.03
ZC3H13-201ENST00000242848 KRTAP6-3Q3LI67 103 aa2.36□□□□□ -2.03
ZC3H13-201ENST00000242848 MYCBP2O75592 4640 aa2.36□□□□□ -2.03
ZC3H13-201ENST00000242848 SYNE2Q8WXH0 6885 aaKnown RBP2.36□□□□□ -2.03
ZC3H13-201ENST00000242848 MT1BP07438 61 aa2.36□□□□□ -2.03
ZC3H13-201ENST00000242848 DNAH11Q96DT5 4516 aa2.35□□□□□ -2.03
ZC3H13-201ENST00000242848 DNAH17Q9UFH2 4485 aa2.34□□□□□ -2.03
ZC3H13-201ENST00000242848 PRKDCP78527 4128 aaKnown RBP2.34□□□□□ -2.03
ZC3H13-201ENST00000242848 SACSQ9NZJ4 4579 aa2.34□□□□□ -2.03
ZC3H13-201ENST00000242848 FAT3Q8TDW7 4589 aa2.34□□□□□ -2.04
ZC3H13-201ENST00000242848 DNHD1Q96M86 4753 aa2.34□□□□□ -2.04
ZC3H13-201ENST00000242848 PRM1P04553 51 aa2.33□□□□□ -2.04
ZC3H13-201ENST00000242848 DNAH9Q9NYC9 4486 aa2.3□□□□□ -2.04
ZC3H13-201ENST00000242848 MT1LQ93083 61 aa2.29□□□□□ -2.04
ZC3H13-201ENST00000242848 FAT1Q14517 4588 aa2.28□□□□□ -2.04
ZC3H13-201ENST00000242848 SYNE1Q8NF91 8797 aaKnown RBP2.26□□□□□ -2.05
ZC3H13-201ENST00000242848 MT1XP80297 61 aa2.26□□□□□ -2.05
ZC3H13-201ENST00000242848 KRTAP19-7Q3SYF9 63 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms