RNA–Protein interactions for RNA: ENST00000239165.8

HOXB7-201, Transcript of homeobox B7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB7, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB7-201ENST00000239165 SNURFQ9Y675 71 aa10.66□□□□□ -0.7
HOXB7-201ENST00000239165 LCA10Q71F78 164 aa10.63□□□□□ -0.71
HOXB7-201ENST00000239165 DMAC1Q96GE9 116 aa10.62□□□□□ -0.71
HOXB7-201ENST00000239165 MT2AP02795 61 aa10.61□□□□□ -0.71
HOXB7-201ENST00000239165 ANAPC13Q9BS18 74 aa10.55□□□□□ -0.72
HOXB7-201ENST00000239165 USH2AO75445 5202 aa10.54□□□□□ -0.72
HOXB7-201ENST00000239165 MT1FP04733 61 aa10.52□□□□□ -0.72
HOXB7-201ENST00000239165 CSAG1Q6PB30 78 aa10.52□□□□□ -0.72
HOXB7-201ENST00000239165 SPANXA2-OT1Q8N9U9 137 aa10.52□□□□□ -0.73
HOXB7-201ENST00000239165 SSPOA2VEC9 5147 aa10.47□□□□□ -0.73
HOXB7-201ENST00000239165 KRTAP10-10P60014 251 aa10.45□□□□□ -0.74
HOXB7-201ENST00000239165 KRTAP9-3Q9BYQ3 159 aa10.45□□□□□ -0.74
HOXB7-201ENST00000239165 NDUFC1O43677 76 aa10.44□□□□□ -0.74
HOXB7-201ENST00000239165 ACYP2P14621 99 aa10.42□□□□□ -0.74
HOXB7-201ENST00000239165 LCE2BO14633 110 aa10.41□□□□□ -0.74
HOXB7-201ENST00000239165 CYSTM1Q9H1C7 97 aa10.41□□□□□ -0.74
HOXB7-201ENST00000239165 H7BZZ5 65 aa10.39□□□□□ -0.75
HOXB7-201ENST00000239165 CCDC179H3BU77 68 aa10.34□□□□□ -0.75
HOXB7-201ENST00000239165 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.31□□□□□ -0.76
HOXB7-201ENST00000239165 H0YAA0 97 aa10.29□□□□□ -0.76
HOXB7-201ENST00000239165 KRTAP19-1Q8IUB9 90 aa10.26□□□□□ -0.77
HOXB7-201ENST00000239165 FCGBPQ9Y6R7 5405 aaPredicted RBP10.24□□□□□ -0.77
HOXB7-201ENST00000239165 KRTAP9-7A8MTY7 169 aa10.19□□□□□ -0.78
HOXB7-201ENST00000239165 CHKB-CPT1BH3BT56 60 aa10.18□□□□□ -0.78
HOXB7-201ENST00000239165 SPTSSBQ8NFR3 76 aa10.17□□□□□ -0.78
HOXB7-201ENST00000239165 COA5Q86WW8 74 aa10.14□□□□□ -0.79
HOXB7-201ENST00000239165 ADM2Q7Z4H4 148 aa10.1□□□□□ -0.79
HOXB7-201ENST00000239165 ATP5EP56381 51 aaPredicted RBP10.07□□□□□ -0.8
HOXB7-201ENST00000239165 KRTAP19-6Q3LI70 58 aa10.07□□□□□ -0.8
HOXB7-201ENST00000239165 CRIPTQ9P021 101 aa10.06□□□□□ -0.8
HOXB7-201ENST00000239165 SPRR2GQ9BYE4 73 aa10.03□□□□□ -0.8
HOXB7-201ENST00000239165 TMEM258P61165 79 aa10.01□□□□□ -0.81
HOXB7-201ENST00000239165 P0C880 135 aa9.97□□□□□ -0.81
HOXB7-201ENST00000239165 MACF1Q9UPN3 7388 aaKnown RBP9.96□□□□□ -0.82
HOXB7-201ENST00000239165 KRTAP19-8Q3LI54 63 aa9.88□□□□□ -0.83
HOXB7-201ENST00000239165 SYNE2Q8WXH0 6885 aaKnown RBP9.86□□□□□ -0.83
HOXB7-201ENST00000239165 PCP4P48539 62 aa9.82□□□□□ -0.84
HOXB7-201ENST00000239165 R4GN34 69 aa9.8□□□□□ -0.84
HOXB7-201ENST00000239165 MT1BP07438 61 aa9.78□□□□□ -0.84
HOXB7-201ENST00000239165 Q5VV11 94 aa9.76□□□□□ -0.85
HOXB7-201ENST00000239165 M0QZ58 72 aa9.74□□□□□ -0.85
HOXB7-201ENST00000239165 SEC61GP60059 68 aa9.7□□□□□ -0.86
HOXB7-201ENST00000239165 SERP1Q9Y6X1 66 aa9.7□□□□□ -0.86
HOXB7-201ENST00000239165 KRTAP6-3Q3LI67 103 aa9.63□□□□□ -0.87
HOXB7-201ENST00000239165 A0A1B0GU69 56 aa9.59□□□□□ -0.87
HOXB7-201ENST00000239165 LINC01558Q9Y6Z2 57 aa9.57□□□□□ -0.88
HOXB7-201ENST00000239165 KRTAP13-4Q3LI77 160 aa9.56□□□□□ -0.88
HOXB7-201ENST00000239165 A6NN06 94 aa9.53□□□□□ -0.88
HOXB7-201ENST00000239165 A0A1B0GU33 70 aa9.52□□□□□ -0.88
HOXB7-201ENST00000239165 LINC01554Q52M75 96 aa9.51□□□□□ -0.89
HOXB7-201ENST00000239165 PLAC4Q8WY50 150 aa9.47□□□□□ -0.89
HOXB7-201ENST00000239165 PRR15LQ9BU68 103 aa9.47□□□□□ -0.89
HOXB7-201ENST00000239165 KRTAP10-5P60370 271 aa9.44□□□□□ -0.9
HOXB7-201ENST00000239165 RPS28P62857 69 aaKnown RBP9.4□□□□□ -0.9
HOXB7-201ENST00000239165 SPATA8Q6RVD6 105 aa9.38□□□□□ -0.91
HOXB7-201ENST00000239165 Q1T7F1 81 aa9.35□□□□□ -0.91
HOXB7-201ENST00000239165 V9GYY9 64 aa9.35□□□□□ -0.91
HOXB7-201ENST00000239165 SMIM26A0A096LP01 95 aa9.33□□□□□ -0.92
HOXB7-201ENST00000239165 MT1XP80297 61 aa9.31□□□□□ -0.92
HOXB7-201ENST00000239165 PRO2289Q9P1D8 64 aa9.26□□□□□ -0.93
HOXB7-201ENST00000239165 NEBP20929 6669 aa9.26□□□□□ -0.93
HOXB7-201ENST00000239165 A0A0D9SG42 100 aa9.24□□□□□ -0.93
HOXB7-201ENST00000239165 MUC12Q9UKN1 5478 aa9.19□□□□□ -0.94
HOXB7-201ENST00000239165 UQCR11O14957 56 aa9.19□□□□□ -0.94
HOXB7-201ENST00000239165 KRTAP12-1P59990 96 aa9.17□□□□□ -0.94
HOXB7-201ENST00000239165 A8MU10 97 aa9.15□□□□□ -0.94
HOXB7-201ENST00000239165 KRTAP5-9P26371 169 aa9.15□□□□□ -0.94
HOXB7-201ENST00000239165 PSPHP1O15172 72 aa9.14□□□□□ -0.95
HOXB7-201ENST00000239165 KRTAP12-2P59991 146 aa9.09□□□□□ -0.95
HOXB7-201ENST00000239165 SPINT4Q6UDR6 99 aa9.09□□□□□ -0.95
HOXB7-201ENST00000239165 CAMK2N1Q7Z7J9 78 aa9.07□□□□□ -0.96
HOXB7-201ENST00000239165 MIR22HGQ0VDD5 57 aa9.02□□□□□ -0.97
HOXB7-201ENST00000239165 KMT2DO14686 5537 aa9.02□□□□□ -0.97
HOXB7-201ENST00000239165 SVIPQ8NHG7 77 aa8.99□□□□□ -0.97
HOXB7-201ENST00000239165 MDN1Q9NU22 5596 aa8.92□□□□□ -0.98
HOXB7-201ENST00000239165 KRTAP20-1Q3LI63 56 aa8.92□□□□□ -0.98
HOXB7-201ENST00000239165 KRTAP10-7P60409 375 aaPredicted RBP8.87□□□□□ -0.99
HOXB7-201ENST00000239165 A6NED7 52 aa8.86□□□□□ -0.99
HOXB7-201ENST00000239165 KRTAP10-12P60413 245 aa8.86□□□□□ -0.99
HOXB7-201ENST00000239165 SPRR2FQ96RM1 72 aa8.82□□□□□ -1
HOXB7-201ENST00000239165 KRTAP8-1Q8IUC2 63 aa8.76□□□□□ -1.01
HOXB7-201ENST00000239165 SPRR2EP22531 72 aa8.72□□□□□ -1.01
HOXB7-201ENST00000239165 SPRR2BP35325 72 aa8.72□□□□□ -1.01
HOXB7-201ENST00000239165 SPRR2AP35326 72 aa8.72□□□□□ -1.01
HOXB7-201ENST00000239165 C10orf95Q9H7T3 257 aa8.72□□□□□ -1.01
HOXB7-201ENST00000239165 K7ERS5 55 aa8.71□□□□□ -1.02
HOXB7-201ENST00000239165 KRTAP2-3P0C7H8 128 aa8.7□□□□□ -1.02
HOXB7-201ENST00000239165 KRTAP2-4Q9BYR9 128 aa8.7□□□□□ -1.02
HOXB7-201ENST00000239165 KRTAP4-8A0A0G2JLE6 195 aa8.69□□□□□ -1.02
HOXB7-201ENST00000239165 KRTAP4-8Q9BYQ9 185 aa8.69□□□□□ -1.02
HOXB7-201ENST00000239165 CDC42SE1Q9NRR8 79 aa8.66□□□□□ -1.02
HOXB7-201ENST00000239165 LCE1AQ5T7P2 110 aa8.62□□□□□ -1.03
HOXB7-201ENST00000239165 TNP1P09430 55 aa8.55□□□□□ -1.04
HOXB7-201ENST00000239165 SPRR2DP22532 72 aa8.43□□□□□ -1.06
HOXB7-201ENST00000239165 KRTAP2-2Q9BYT5 123 aa8.41□□□□□ -1.06
HOXB7-201ENST00000239165 KRTAP2-1Q9BYU5 128 aa8.41□□□□□ -1.06
HOXB7-201ENST00000239165 KRTAP25-1Q3LHN0 102 aa8.39□□□□□ -1.07
HOXB7-201ENST00000239165 KRTAP19-7Q3SYF9 63 aa8.33□□□□□ -1.08
HOXB7-201ENST00000239165 LCE3AQ5TA76 89 aa8.32□□□□□ -1.08
HOXB7-201ENST00000239165 ROMO1P60602 79 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms