RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 MEGF8Q7Z7M0 2845 aa4.68□□□□□ -1.66
SLF2-201ENST00000238961 DNAH3Q8TD57 4116 aa4.63□□□□□ -1.67
SLF2-201ENST00000238961 DNAH7Q8WXX0 4024 aa4.63□□□□□ -1.67
SLF2-201ENST00000238961 KRTAP12-3P60328 96 aa4.61□□□□□ -1.67
SLF2-201ENST00000238961 DNAH1Q9P2D7 4330 aa4.6□□□□□ -1.67
SLF2-201ENST00000238961 PRKDCP78527 4128 aaKnown RBP4.6□□□□□ -1.67
SLF2-201ENST00000238961 LORP23490 312 aaPredicted RBP4.58□□□□□ -1.68
SLF2-201ENST00000238961 ALMS1Q8TCU4 4167 aa4.58□□□□□ -1.68
SLF2-201ENST00000238961 KRTAP8-1Q8IUC2 63 aa4.55□□□□□ -1.68
SLF2-201ENST00000238961 KRTAP4-5Q9BYR2 181 aa4.52□□□□□ -1.69
SLF2-201ENST00000238961 KRTAP3-1Q9BYR8 98 aa4.51□□□□□ -1.69
SLF2-201ENST00000238961 PLECQ15149 4684 aaKnown RBP4.5□□□□□ -1.69
SLF2-201ENST00000238961 KRTAP10-7P60409 375 aaPredicted RBP4.48□□□□□ -1.69
SLF2-201ENST00000238961 LCE3AQ5TA76 89 aa4.48□□□□□ -1.69
SLF2-201ENST00000238961 HECTD4Q9Y4D8 3996 aa4.48□□□□□ -1.69
SLF2-201ENST00000238961 VPS13BQ7Z7G8 4022 aa4.48□□□□□ -1.69
SLF2-201ENST00000238961 STARD9Q9P2P6 4700 aa4.45□□□□□ -1.7
SLF2-201ENST00000238961 DNAH6Q9C0G6 4158 aa4.44□□□□□ -1.7
SLF2-201ENST00000238961 VPS13DQ5THJ4 4388 aa4.39□□□□□ -1.71
SLF2-201ENST00000238961 DNAH2Q9P225 4427 aa4.39□□□□□ -1.71
SLF2-201ENST00000238961 MT1HL1P0DM35 61 aa4.38□□□□□ -1.71
SLF2-201ENST00000238961 DNAH11Q96DT5 4516 aa4.36□□□□□ -1.71
SLF2-201ENST00000238961 DYNC2H1Q8NCM8 4307 aaKnown RBP4.32□□□□□ -1.72
SLF2-201ENST00000238961 FAT2Q9NYQ8 4349 aa4.3□□□□□ -1.72
SLF2-201ENST00000238961 DNAH17Q9UFH2 4485 aa4.29□□□□□ -1.72
SLF2-201ENST00000238961 KRTAP10-4P60372 401 aaPredicted RBP4.26□□□□□ -1.73
SLF2-201ENST00000238961 KRTAP23-1A1A580 65 aa4.25□□□□□ -1.73
SLF2-201ENST00000238961 PKHD1P08F94 4074 aa4.23□□□□□ -1.73
SLF2-201ENST00000238961 DNAH8Q96JB1 4490 aa4.22□□□□□ -1.73
SLF2-201ENST00000238961 SPRR2FQ96RM1 72 aa4.2□□□□□ -1.74
SLF2-201ENST00000238961 LRP1BQ9NZR2 4599 aa4.2□□□□□ -1.74
SLF2-201ENST00000238961 KRTAP3-2Q9BYR7 98 aa4.19□□□□□ -1.74
SLF2-201ENST00000238961 DNAH5Q8TE73 4624 aa4.18□□□□□ -1.74
SLF2-201ENST00000238961 KRTAP3-3Q9BYR6 98 aa4.16□□□□□ -1.74
SLF2-201ENST00000238961 DNHD1Q96M86 4753 aa4.1□□□□□ -1.75
SLF2-201ENST00000238961 FAT1Q14517 4588 aa4.09□□□□□ -1.75
SLF2-201ENST00000238961 PKD1P98161 4303 aa4.03□□□□□ -1.76
SLF2-201ENST00000238961 SPRR2EP22531 72 aa4□□□□□ -1.77
SLF2-201ENST00000238961 SPRR2BP35325 72 aa4□□□□□ -1.77
SLF2-201ENST00000238961 SPRR2AP35326 72 aa4□□□□□ -1.77
SLF2-201ENST00000238961 SACSQ9NZJ4 4579 aa4□□□□□ -1.77
SLF2-201ENST00000238961 DYNC1H1Q14204 4646 aaKnown RBP3.97□□□□□ -1.77
SLF2-201ENST00000238961 HSPG2P98160 4391 aa3.97□□□□□ -1.77
SLF2-201ENST00000238961 KRTAP19-5Q3LI72 72 aa3.94□□□□□ -1.78
SLF2-201ENST00000238961 LCE3BQ5TA77 95 aa3.94□□□□□ -1.78
SLF2-201ENST00000238961 HYDINQ4G0P3 5121 aa3.94□□□□□ -1.78
SLF2-201ENST00000238961 LRP1Q07954 4544 aaKnown RBP3.92□□□□□ -1.78
SLF2-201ENST00000238961 FAT3Q8TDW7 4589 aa3.91□□□□□ -1.78
SLF2-201ENST00000238961 APOBP04114 4563 aaKnown RBP3.91□□□□□ -1.78
SLF2-201ENST00000238961 KRTAP4-1Q9BYQ7 146 aa3.9□□□□□ -1.78
SLF2-201ENST00000238961 TNXBP22105 4242 aa3.9□□□□□ -1.78
SLF2-201ENST00000238961 MT1HP80294 61 aa3.9□□□□□ -1.79
SLF2-201ENST00000238961 LCE3CQ5T5A8 94 aa3.9□□□□□ -1.79
SLF2-201ENST00000238961 PKHD1L1Q86WI1 4243 aa3.89□□□□□ -1.79
SLF2-201ENST00000238961 SPRR2DP22532 72 aa3.88□□□□□ -1.79
SLF2-201ENST00000238961 KRTAP17-1Q9BYP8 105 aa3.87□□□□□ -1.79
SLF2-201ENST00000238961 LPAP08519 4548 aa3.87□□□□□ -1.79
SLF2-201ENST00000238961 MYCBP2O75592 4640 aa3.86□□□□□ -1.79
SLF2-201ENST00000238961 KRTAP12-4P60329 112 aa3.86□□□□□ -1.79
SLF2-201ENST00000238961 LCE2BO14633 110 aa3.79□□□□□ -1.8
SLF2-201ENST00000238961 MT2AP02795 61 aa3.75□□□□□ -1.81
SLF2-201ENST00000238961 RYR1P21817 5038 aa3.72□□□□□ -1.81
SLF2-201ENST00000238961 MT1GP13640 62 aa3.7□□□□□ -1.82
SLF2-201ENST00000238961 SPRR5A0A1B0GTR4 108 aa3.68□□□□□ -1.82
SLF2-201ENST00000238961 SPRR2GQ9BYE4 73 aa3.68□□□□□ -1.82
SLF2-201ENST00000238961 MT1FP04733 61 aa3.67□□□□□ -1.82
SLF2-201ENST00000238961 RYR3Q15413 4870 aa3.67□□□□□ -1.82
SLF2-201ENST00000238961 LCE2CQ5TA81 110 aa3.66□□□□□ -1.82
SLF2-201ENST00000238961 LCE3DQ9BYE3 92 aa3.66□□□□□ -1.82
SLF2-201ENST00000238961 LCE3EQ5T5B0 92 aa3.65□□□□□ -1.83
SLF2-201ENST00000238961 KRTAP19-4Q3LI73 84 aa3.64□□□□□ -1.83
SLF2-201ENST00000238961 LRP2P98164 4655 aa3.63□□□□□ -1.83
SLF2-201ENST00000238961 KMT2CQ8NEZ4 4911 aaKnown RBP3.61□□□□□ -1.83
SLF2-201ENST00000238961 LCE2DQ5TA82 110 aaPredicted RBP3.61□□□□□ -1.83
SLF2-201ENST00000238961 FLGP20930 4061 aaPredicted RBP3.55□□□□□ -1.84
SLF2-201ENST00000238961 RYR2Q92736 4967 aa3.51□□□□□ -1.85
SLF2-201ENST00000238961 LCE1BQ5T7P3 118 aa3.51□□□□□ -1.85
SLF2-201ENST00000238961 MT4P47944 62 aa3.5□□□□□ -1.85
SLF2-201ENST00000238961 KIAA1109Q2LD37 5005 aa3.44□□□□□ -1.86
SLF2-201ENST00000238961 LCE1DQ5T752 114 aa3.43□□□□□ -1.86
SLF2-201ENST00000238961 KRTAP19-1Q8IUB9 90 aa3.41□□□□□ -1.86
SLF2-201ENST00000238961 KRTAP9-8Q9BYQ0 159 aa3.37□□□□□ -1.87
SLF2-201ENST00000238961 HERC2O95714 4834 aa3.36□□□□□ -1.87
SLF2-201ENST00000238961 PRM1P04553 51 aa3.36□□□□□ -1.87
SLF2-201ENST00000238961 KRTAP9-2Q9BYQ4 174 aa3.36□□□□□ -1.87
SLF2-201ENST00000238961 MUC17Q685J3 4493 aa3.34□□□□□ -1.87
SLF2-201ENST00000238961 KRTAP4-8A0A0G2JLE6 195 aa3.33□□□□□ -1.88
SLF2-201ENST00000238961 KRTAP4-8Q9BYQ9 185 aa3.33□□□□□ -1.88
SLF2-201ENST00000238961 LCE5AQ5TCM9 118 aa3.33□□□□□ -1.88
SLF2-201ENST00000238961 MT3P25713 68 aa3.31□□□□□ -1.88
SLF2-201ENST00000238961 KRTAP19-8Q3LI54 63 aa3.3□□□□□ -1.88
SLF2-201ENST00000238961 MT1XP80297 61 aa3.29□□□□□ -1.88
SLF2-201ENST00000238961 KRTAP9-3Q9BYQ3 159 aa3.28□□□□□ -1.88
SLF2-201ENST00000238961 EPPK1P58107 5090 aaKnown RBP3.28□□□□□ -1.88
SLF2-201ENST00000238961 MT1BP07438 61 aa3.26□□□□□ -1.89
SLF2-201ENST00000238961 KRTAP19-2Q3LHN2 52 aa3.24□□□□□ -1.89
SLF2-201ENST00000238961 KRTAP19-3Q7Z4W3 81 aa3.24□□□□□ -1.89
SLF2-201ENST00000238961 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
SLF2-201ENST00000238961 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
SLF2-201ENST00000238961 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms