RNA–Protein interactions for RNA: ENST00000233114.12

MDH1-201, Transcript of malate dehydrogenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MDH1, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-201ENST00000233114 RETNLBQ9BQ08 111 aa5.5□□□□□ -1.53
MDH1-201ENST00000233114 A0A1B0GVY2 172 aa5.48□□□□□ -1.53
MDH1-201ENST00000233114 A8MU10 97 aa5.46□□□□□ -1.54
MDH1-201ENST00000233114 HYDINQ4G0P3 5121 aa5.46□□□□□ -1.54
MDH1-201ENST00000233114 SPINK7P58062 85 aa5.45□□□□□ -1.54
MDH1-201ENST00000233114 SACSQ9NZJ4 4579 aa5.44□□□□□ -1.54
MDH1-201ENST00000233114 KRTAP10-4P60372 401 aaPredicted RBP5.44□□□□□ -1.54
MDH1-201ENST00000233114 C20orf166-AS1Q96NR2 134 aa5.44□□□□□ -1.54
MDH1-201ENST00000233114 VPS13BQ7Z7G8 4022 aa5.44□□□□□ -1.54
MDH1-201ENST00000233114 A0A1B0GU69 56 aa5.43□□□□□ -1.54
MDH1-201ENST00000233114 A8MUU9 505 aa5.43□□□□□ -1.54
MDH1-201ENST00000233114 SPTSSBQ8NFR3 76 aa5.43□□□□□ -1.54
MDH1-201ENST00000233114 KRTAP23-1A1A580 65 aa5.41□□□□□ -1.54
MDH1-201ENST00000233114 SMR3BP02814 79 aaPredicted RBP5.4□□□□□ -1.55
MDH1-201ENST00000233114 PRAC1Q96KF2 57 aa5.38□□□□□ -1.55
MDH1-201ENST00000233114 SPATA8Q6RVD6 105 aa5.37□□□□□ -1.55
MDH1-201ENST00000233114 UQCR11O14957 56 aa5.36□□□□□ -1.55
MDH1-201ENST00000233114 DYNC1H1Q14204 4646 aaKnown RBP5.34□□□□□ -1.56
MDH1-201ENST00000233114 PKHD1L1Q86WI1 4243 aa5.32□□□□□ -1.56
MDH1-201ENST00000233114 C9orf92A6NGG3 77 aa5.32□□□□□ -1.56
MDH1-201ENST00000233114 MIR22HGQ0VDD5 57 aa5.31□□□□□ -1.56
MDH1-201ENST00000233114 PKHD1P08F94 4074 aa5.3□□□□□ -1.56
MDH1-201ENST00000233114 KRTAP15-1Q3LI76 137 aa5.29□□□□□ -1.56
MDH1-201ENST00000233114 APOBP04114 4563 aaKnown RBP5.28□□□□□ -1.56
MDH1-201ENST00000233114 ADM2Q7Z4H4 148 aa5.28□□□□□ -1.56
MDH1-201ENST00000233114 KRTAP10-8P60410 259 aa5.26□□□□□ -1.57
MDH1-201ENST00000233114 LUZP6Q538Z0 58 aa5.25□□□□□ -1.57
MDH1-201ENST00000233114 COX6B2Q6YFQ2 88 aa5.24□□□□□ -1.57
MDH1-201ENST00000233114 FLG2Q5D862 2391 aaPredicted RBP5.24□□□□□ -1.57
MDH1-201ENST00000233114 RYR2Q92736 4967 aa5.22□□□□□ -1.57
MDH1-201ENST00000233114 ROMO1P60602 79 aa5.2□□□□□ -1.58
MDH1-201ENST00000233114 Q5VSD8 79 aa5.2□□□□□ -1.58
MDH1-201ENST00000233114 K7ERS5 55 aa5.19□□□□□ -1.58
MDH1-201ENST00000233114 RPL37P61927 97 aaKnown RBP5.18□□□□□ -1.58
MDH1-201ENST00000233114 FAT1Q14517 4588 aa5.17□□□□□ -1.58
MDH1-201ENST00000233114 A0A1B0GU33 70 aa5.15□□□□□ -1.58
MDH1-201ENST00000233114 H1FX-AS1Q4G0G2 97 aa5.15□□□□□ -1.59
MDH1-201ENST00000233114 H0YAA0 97 aa5.13□□□□□ -1.59
MDH1-201ENST00000233114 CAMK2N1Q7Z7J9 78 aa5.13□□□□□ -1.59
MDH1-201ENST00000233114 TNXBP22105 4242 aa5.1□□□□□ -1.59
MDH1-201ENST00000233114 MT1HL1P0DM35 61 aa5.07□□□□□ -1.6
MDH1-201ENST00000233114 FAT3Q8TDW7 4589 aa5.07□□□□□ -1.6
MDH1-201ENST00000233114 S4R3F8 94 aa5.05□□□□□ -1.6
MDH1-201ENST00000233114 HSPG2P98160 4391 aa5.04□□□□□ -1.6
MDH1-201ENST00000233114 RYR1P21817 5038 aa5.03□□□□□ -1.6
MDH1-201ENST00000233114 KMT2CQ8NEZ4 4911 aaKnown RBP5.02□□□□□ -1.61
MDH1-201ENST00000233114 TPRXLQ17RH7 258 aa5.02□□□□□ -1.61
MDH1-201ENST00000233114 P0C880 135 aa5□□□□□ -1.61
MDH1-201ENST00000233114 KRTAP10-6P60371 365 aaPredicted RBP4.99□□□□□ -1.61
MDH1-201ENST00000233114 DMBT1Q9UGM3 2413 aaPredicted RBP4.99□□□□□ -1.61
MDH1-201ENST00000233114 LRP1Q07954 4544 aaKnown RBP4.97□□□□□ -1.61
MDH1-201ENST00000233114 CSAG1Q6PB30 78 aa4.96□□□□□ -1.62
MDH1-201ENST00000233114 KRTAP25-1Q3LHN0 102 aa4.89□□□□□ -1.63
MDH1-201ENST00000233114 KRTAP13-4Q3LI77 160 aa4.89□□□□□ -1.63
MDH1-201ENST00000233114 RYR3Q15413 4870 aa4.86□□□□□ -1.63
MDH1-201ENST00000233114 KIAA1109Q2LD37 5005 aa4.86□□□□□ -1.63
MDH1-201ENST00000233114 M0QZ58 72 aa4.84□□□□□ -1.63
MDH1-201ENST00000233114 MYCBP2O75592 4640 aa4.83□□□□□ -1.64
MDH1-201ENST00000233114 NDUFAF8A1L188 74 aa4.83□□□□□ -1.64
MDH1-201ENST00000233114 A0A0D9SG42 100 aa4.82□□□□□ -1.64
MDH1-201ENST00000233114 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.77□□□□□ -1.65
MDH1-201ENST00000233114 KRTAP12-1P59990 96 aa4.75□□□□□ -1.65
MDH1-201ENST00000233114 KRTAP12-2P59991 146 aa4.73□□□□□ -1.65
MDH1-201ENST00000233114 LCE1AQ5T7P2 110 aa4.71□□□□□ -1.66
MDH1-201ENST00000233114 KRTAP10-7P60409 375 aaPredicted RBP4.7□□□□□ -1.66
MDH1-201ENST00000233114 EPPK1P58107 5090 aaKnown RBP4.69□□□□□ -1.66
MDH1-201ENST00000233114 LRP2P98164 4655 aa4.69□□□□□ -1.66
MDH1-201ENST00000233114 SPINT4Q6UDR6 99 aa4.69□□□□□ -1.66
MDH1-201ENST00000233114 KRTAP5-11Q6L8G4 156 aa4.67□□□□□ -1.66
MDH1-201ENST00000233114 CRIPTQ9P021 101 aa4.67□□□□□ -1.66
MDH1-201ENST00000233114 R4GN34 69 aa4.66□□□□□ -1.66
MDH1-201ENST00000233114 KRTAP4-1Q9BYQ7 146 aa4.64□□□□□ -1.67
MDH1-201ENST00000233114 KRTAP19-2Q3LHN2 52 aa4.61□□□□□ -1.67
MDH1-201ENST00000233114 ABCA13Q86UQ4 5058 aa4.61□□□□□ -1.67
MDH1-201ENST00000233114 LPAP08519 4548 aa4.59□□□□□ -1.68
MDH1-201ENST00000233114 MUC17Q685J3 4493 aa4.57□□□□□ -1.68
MDH1-201ENST00000233114 C10orf95Q9H7T3 257 aa4.57□□□□□ -1.68
MDH1-201ENST00000233114 PRO2289Q9P1D8 64 aa4.51□□□□□ -1.69
MDH1-201ENST00000233114 HERC2O95714 4834 aa4.51□□□□□ -1.69
MDH1-201ENST00000233114 KRTAP2-2Q9BYT5 123 aa4.48□□□□□ -1.69
MDH1-201ENST00000233114 BIRC6Q9NR09 4857 aa4.47□□□□□ -1.69
MDH1-201ENST00000233114 PP632Q6XCG6 107 aa4.42□□□□□ -1.7
MDH1-201ENST00000233114 FLGP20930 4061 aaPredicted RBP4.42□□□□□ -1.7
MDH1-201ENST00000233114 LCE1EQ5T753 118 aa4.38□□□□□ -1.71
MDH1-201ENST00000233114 HERC1Q15751 4861 aa4.34□□□□□ -1.71
MDH1-201ENST00000233114 SPRR2GQ9BYE4 73 aa4.3□□□□□ -1.72
MDH1-201ENST00000233114 HMCN2Q8NDA2 5059 aa4.29□□□□□ -1.72
MDH1-201ENST00000233114 TNP1P09430 55 aa4.28□□□□□ -1.72
MDH1-201ENST00000233114 PLAC4Q8WY50 150 aa4.28□□□□□ -1.72
MDH1-201ENST00000233114 PCLOQ9Y6V0 5065 aa4.23□□□□□ -1.73
MDH1-201ENST00000233114 MT1HP80294 61 aa4.22□□□□□ -1.73
MDH1-201ENST00000233114 M0R2T5 61 aa4.21□□□□□ -1.74
MDH1-201ENST00000233114 MUC2Q02817 5179 aa4.16□□□□□ -1.74
MDH1-201ENST00000233114 MT2AP02795 61 aa4.16□□□□□ -1.74
MDH1-201ENST00000233114 INE1O15225 51 aa4.14□□□□□ -1.75
MDH1-201ENST00000233114 MT1FP04733 61 aa4.13□□□□□ -1.75
MDH1-201ENST00000233114 KRTAP10-10P60014 251 aa4.13□□□□□ -1.75
MDH1-201ENST00000233114 KRTAP19-8Q3LI54 63 aa4.13□□□□□ -1.75
MDH1-201ENST00000233114 KRTAP5-1Q6L8H4 278 aa4.13□□□□□ -1.75
MDH1-201ENST00000233114 RNF213Q63HN8 5207 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms