RNA–Protein interactions for RNA: ENST00000219252.9

POLR2C-201, Transcript of RNA polymerase II subunit C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2C, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2C-201ENST00000219252 CDC42SE1Q9NRR8 79 aa9.69□□□□□ -0.86
POLR2C-201ENST00000219252 RPL37P61927 97 aaKnown RBP9.67□□□□□ -0.86
POLR2C-201ENST00000219252 KRTAP4-5Q9BYR2 181 aa9.62□□□□□ -0.87
POLR2C-201ENST00000219252 COX6B2Q6YFQ2 88 aa9.59□□□□□ -0.87
POLR2C-201ENST00000219252 PRAC1Q96KF2 57 aa9.51□□□□□ -0.89
POLR2C-201ENST00000219252 ABCA13Q86UQ4 5058 aa9.46□□□□□ -0.9
POLR2C-201ENST00000219252 UQCR11O14957 56 aa9.46□□□□□ -0.9
POLR2C-201ENST00000219252 SPATA8Q6RVD6 105 aa9.46□□□□□ -0.9
POLR2C-201ENST00000219252 LRP2P98164 4655 aa9.45□□□□□ -0.9
POLR2C-201ENST00000219252 LPAP08519 4548 aa9.44□□□□□ -0.9
POLR2C-201ENST00000219252 TPRXLQ17RH7 258 aa9.43□□□□□ -0.9
POLR2C-201ENST00000219252 MIR22HGQ0VDD5 57 aa9.43□□□□□ -0.9
POLR2C-201ENST00000219252 KRTAP3-3Q9BYR6 98 aa9.38□□□□□ -0.91
POLR2C-201ENST00000219252 ADM2Q7Z4H4 148 aa9.33□□□□□ -0.92
POLR2C-201ENST00000219252 H0YAA0 97 aa9.28□□□□□ -0.92
POLR2C-201ENST00000219252 HERC2O95714 4834 aa9.26□□□□□ -0.93
POLR2C-201ENST00000219252 A0A1B0GU33 70 aa9.26□□□□□ -0.93
POLR2C-201ENST00000219252 S4R3F8 94 aa9.26□□□□□ -0.93
POLR2C-201ENST00000219252 J3QL48 77 aa9.25□□□□□ -0.93
POLR2C-201ENST00000219252 H1FX-AS1Q4G0G2 97 aa9.25□□□□□ -0.93
POLR2C-201ENST00000219252 KRTAP10-6P60371 365 aaPredicted RBP9.18□□□□□ -0.94
POLR2C-201ENST00000219252 ROMO1P60602 79 aa9.17□□□□□ -0.94
POLR2C-201ENST00000219252 BIRC6Q9NR09 4857 aa9.17□□□□□ -0.94
POLR2C-201ENST00000219252 KRTAP3-2Q9BYR7 98 aa9.16□□□□□ -0.94
POLR2C-201ENST00000219252 SEC61BP60468 96 aaKnown RBP9.11□□□□□ -0.95
POLR2C-201ENST00000219252 CSAG1Q6PB30 78 aa9.08□□□□□ -0.96
POLR2C-201ENST00000219252 P0C880 135 aa9.05□□□□□ -0.96
POLR2C-201ENST00000219252 KRTAP13-4Q3LI77 160 aa9.05□□□□□ -0.96
POLR2C-201ENST00000219252 KRTAP4-1Q9BYQ7 146 aa9.05□□□□□ -0.96
POLR2C-201ENST00000219252 MUC17Q685J3 4493 aa9.04□□□□□ -0.96
POLR2C-201ENST00000219252 A0A0D9SG42 100 aa8.89□□□□□ -0.99
POLR2C-201ENST00000219252 KRTAP19-2Q3LHN2 52 aa8.86□□□□□ -0.99
POLR2C-201ENST00000219252 PCLOQ9Y6V0 5065 aa8.85□□□□□ -0.99
POLR2C-201ENST00000219252 HERC1Q15751 4861 aa8.83□□□□□ -1
POLR2C-201ENST00000219252 K7ERS5 55 aa8.79□□□□□ -1
POLR2C-201ENST00000219252 MUC2Q02817 5179 aa8.79□□□□□ -1
POLR2C-201ENST00000219252 HMCN2Q8NDA2 5059 aa8.74□□□□□ -1.01
POLR2C-201ENST00000219252 LUZP6Q538Z0 58 aa8.72□□□□□ -1.01
POLR2C-201ENST00000219252 KRTAP12-2P59991 146 aa8.71□□□□□ -1.02
POLR2C-201ENST00000219252 KRTAP25-1Q3LHN0 102 aa8.7□□□□□ -1.02
POLR2C-201ENST00000219252 M0QZ58 72 aa8.69□□□□□ -1.02
POLR2C-201ENST00000219252 KRTAP12-1P59990 96 aa8.66□□□□□ -1.02
POLR2C-201ENST00000219252 LORP23490 312 aaPredicted RBP8.63□□□□□ -1.03
POLR2C-201ENST00000219252 FLGP20930 4061 aaPredicted RBP8.61□□□□□ -1.03
POLR2C-201ENST00000219252 NDUFAF8A1L188 74 aa8.61□□□□□ -1.03
POLR2C-201ENST00000219252 SPINT4Q6UDR6 99 aa8.6□□□□□ -1.03
POLR2C-201ENST00000219252 CRIPTQ9P021 101 aa8.57□□□□□ -1.04
POLR2C-201ENST00000219252 R4GN34 69 aa8.57□□□□□ -1.04
POLR2C-201ENST00000219252 LCE2CQ5TA81 110 aa8.45□□□□□ -1.06
POLR2C-201ENST00000219252 FAT4Q6V0I7 4981 aa8.39□□□□□ -1.07
POLR2C-201ENST00000219252 UBR4Q5T4S7 5183 aa8.37□□□□□ -1.07
POLR2C-201ENST00000219252 KRTAP15-1Q3LI76 137 aa8.34□□□□□ -1.07
POLR2C-201ENST00000219252 C10orf95Q9H7T3 257 aa8.34□□□□□ -1.07
POLR2C-201ENST00000219252 RNF213Q63HN8 5207 aa8.32□□□□□ -1.08
POLR2C-201ENST00000219252 MT1HP80294 61 aa8.22□□□□□ -1.09
POLR2C-201ENST00000219252 M0R2T5 61 aa8.14□□□□□ -1.11
POLR2C-201ENST00000219252 CAMK2N1Q7Z7J9 78 aa8.07□□□□□ -1.12
POLR2C-201ENST00000219252 KRTAP19-1Q8IUB9 90 aa8.04□□□□□ -1.12
POLR2C-201ENST00000219252 SPRR2GQ9BYE4 73 aa8.02□□□□□ -1.12
POLR2C-201ENST00000219252 MT2AP02795 61 aa8.01□□□□□ -1.13
POLR2C-201ENST00000219252 MT1FP04733 61 aa8□□□□□ -1.13
POLR2C-201ENST00000219252 KRTAP9-8Q9BYQ0 159 aa7.99□□□□□ -1.13
POLR2C-201ENST00000219252 KRTAP10-10P60014 251 aa7.93□□□□□ -1.14
POLR2C-201ENST00000219252 PLAC4Q8WY50 150 aa7.82□□□□□ -1.16
POLR2C-201ENST00000219252 TNP1P09430 55 aa7.74□□□□□ -1.17
POLR2C-201ENST00000219252 KRTAP19-8Q3LI54 63 aa7.73□□□□□ -1.17
POLR2C-201ENST00000219252 PP632Q6XCG6 107 aa7.71□□□□□ -1.18
POLR2C-201ENST00000219252 KRTAP9-3Q9BYQ3 159 aa7.67□□□□□ -1.18
POLR2C-201ENST00000219252 MT1BP07438 61 aa7.67□□□□□ -1.18
POLR2C-201ENST00000219252 KRTAP23-1A1A580 65 aa7.57□□□□□ -1.2
POLR2C-201ENST00000219252 KRTAP10-5P60370 271 aa7.53□□□□□ -1.2
POLR2C-201ENST00000219252 LCE2AQ5TA79 106 aaPredicted RBP7.53□□□□□ -1.2
POLR2C-201ENST00000219252 MT1XP80297 61 aa7.53□□□□□ -1.2
POLR2C-201ENST00000219252 PRO2289Q9P1D8 64 aa7.48□□□□□ -1.21
POLR2C-201ENST00000219252 LCE3AQ5TA76 89 aa7.43□□□□□ -1.22
POLR2C-201ENST00000219252 LCE2BO14633 110 aa7.43□□□□□ -1.22
POLR2C-201ENST00000219252 KRTAP10-7P60409 375 aaPredicted RBP7.3□□□□□ -1.24
POLR2C-201ENST00000219252 USH2AO75445 5202 aa7.27□□□□□ -1.25
POLR2C-201ENST00000219252 KRTAP10-12P60413 245 aa7.24□□□□□ -1.25
POLR2C-201ENST00000219252 KRTAP8-1Q8IUC2 63 aa7.23□□□□□ -1.25
POLR2C-201ENST00000219252 SPRR5A0A1B0GTR4 108 aa7.13□□□□□ -1.27
POLR2C-201ENST00000219252 KRTAP12-3P60328 96 aa7.07□□□□□ -1.28
POLR2C-201ENST00000219252 KMT2DO14686 5537 aa6.98□□□□□ -1.29
POLR2C-201ENST00000219252 INE1O15225 51 aa6.96□□□□□ -1.3
POLR2C-201ENST00000219252 KRTAP4-8A0A0G2JLE6 195 aa6.93□□□□□ -1.3
POLR2C-201ENST00000219252 KRTAP4-8Q9BYQ9 185 aa6.93□□□□□ -1.3
POLR2C-201ENST00000219252 KRTAP19-5Q3LI72 72 aa6.92□□□□□ -1.3
POLR2C-201ENST00000219252 SSPOA2VEC9 5147 aa6.87□□□□□ -1.31
POLR2C-201ENST00000219252 KRTAP19-6Q3LI70 58 aa6.75□□□□□ -1.33
POLR2C-201ENST00000219252 FSIP2Q5CZC0 6907 aa6.74□□□□□ -1.33
POLR2C-201ENST00000219252 KRTAP19-7Q3SYF9 63 aa6.72□□□□□ -1.33
POLR2C-201ENST00000219252 LCE3CQ5T5A8 94 aa6.64□□□□□ -1.35
POLR2C-201ENST00000219252 LCE2DQ5TA82 110 aaPredicted RBP6.56□□□□□ -1.36
POLR2C-201ENST00000219252 MT1EP04732 61 aa6.54□□□□□ -1.36
POLR2C-201ENST00000219252 KRTAP4-7Q9BYR0 210 aa6.49□□□□□ -1.37
POLR2C-201ENST00000219252 MT1LQ93083 61 aa6.48□□□□□ -1.37
POLR2C-201ENST00000219252 FCGBPQ9Y6R7 5405 aaPredicted RBP6.47□□□□□ -1.37
POLR2C-201ENST00000219252 KRTAP9-6A8MVA2 160 aa6.43□□□□□ -1.38
POLR2C-201ENST00000219252 KRTAP9-2Q9BYQ4 174 aa6.43□□□□□ -1.38
POLR2C-201ENST00000219252 KRTAP19-4Q3LI73 84 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms