RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 ZNF469Q96JG9 3925 aaPredicted RBP6.17□□□□□ -1.42
SPTLC2-201ENST00000216484 FRAS1Q86XX4 4008 aa6.16□□□□□ -1.42
SPTLC2-201ENST00000216484 LORP23490 312 aaPredicted RBP6.07□□□□□ -1.44
SPTLC2-201ENST00000216484 CMYA5Q8N3K9 4069 aa6.06□□□□□ -1.44
SPTLC2-201ENST00000216484 DNAH2Q9P225 4427 aa5.98□□□□□ -1.45
SPTLC2-201ENST00000216484 ANK2Q01484 3957 aa5.96□□□□□ -1.46
SPTLC2-201ENST00000216484 MT1HL1P0DM35 61 aa5.96□□□□□ -1.46
SPTLC2-201ENST00000216484 HUWE1Q7Z6Z7 4374 aaKnown RBP5.94□□□□□ -1.46
SPTLC2-201ENST00000216484 ANK3Q12955 4377 aaKnown RBP5.9□□□□□ -1.46
SPTLC2-201ENST00000216484 KMT2AQ03164 3969 aa5.89□□□□□ -1.47
SPTLC2-201ENST00000216484 DNAH7Q8WXX0 4024 aa5.88□□□□□ -1.47
SPTLC2-201ENST00000216484 KRTAP4-5Q9BYR2 181 aa5.87□□□□□ -1.47
SPTLC2-201ENST00000216484 VPS13BQ7Z7G8 4022 aa5.87□□□□□ -1.47
SPTLC2-201ENST00000216484 KRTAP10-7P60409 375 aaPredicted RBP5.86□□□□□ -1.47
SPTLC2-201ENST00000216484 DNAH3Q8TD57 4116 aa5.82□□□□□ -1.48
SPTLC2-201ENST00000216484 HECTD4Q9Y4D8 3996 aa5.7□□□□□ -1.5
SPTLC2-201ENST00000216484 DNAH1Q9P2D7 4330 aa5.7□□□□□ -1.5
SPTLC2-201ENST00000216484 SPRR2FQ96RM1 72 aa5.7□□□□□ -1.5
SPTLC2-201ENST00000216484 DNAH6Q9C0G6 4158 aa5.63□□□□□ -1.51
SPTLC2-201ENST00000216484 LCE3CQ5T5A8 94 aa5.62□□□□□ -1.51
SPTLC2-201ENST00000216484 KRTAP19-5Q3LI72 72 aa5.61□□□□□ -1.51
SPTLC2-201ENST00000216484 KRTAP10-4P60372 401 aaPredicted RBP5.56□□□□□ -1.52
SPTLC2-201ENST00000216484 LCE3BQ5TA77 95 aa5.52□□□□□ -1.53
SPTLC2-201ENST00000216484 FLGP20930 4061 aaPredicted RBP5.48□□□□□ -1.53
SPTLC2-201ENST00000216484 MT1HP80294 61 aa5.42□□□□□ -1.54
SPTLC2-201ENST00000216484 DNAH8Q96JB1 4490 aa5.39□□□□□ -1.55
SPTLC2-201ENST00000216484 SPRR2GQ9BYE4 73 aa5.39□□□□□ -1.55
SPTLC2-201ENST00000216484 DNAH10Q8IVF4 4471 aa5.37□□□□□ -1.55
SPTLC2-201ENST00000216484 KRTAP12-4P60329 112 aa5.36□□□□□ -1.55
SPTLC2-201ENST00000216484 SPRR2EP22531 72 aa5.36□□□□□ -1.55
SPTLC2-201ENST00000216484 SPRR2BP35325 72 aa5.36□□□□□ -1.55
SPTLC2-201ENST00000216484 SPRR2AP35326 72 aa5.36□□□□□ -1.55
SPTLC2-201ENST00000216484 PRKDCP78527 4128 aaKnown RBP5.31□□□□□ -1.56
SPTLC2-201ENST00000216484 FAT2Q9NYQ8 4349 aa5.3□□□□□ -1.56
SPTLC2-201ENST00000216484 MT2AP02795 61 aa5.28□□□□□ -1.56
SPTLC2-201ENST00000216484 KRTAP4-1Q9BYQ7 146 aa5.27□□□□□ -1.57
SPTLC2-201ENST00000216484 DNAH9Q9NYC9 4486 aa5.21□□□□□ -1.58
SPTLC2-201ENST00000216484 MT1GP13640 62 aa5.18□□□□□ -1.58
SPTLC2-201ENST00000216484 SPRR2DP22532 72 aa5.18□□□□□ -1.58
SPTLC2-201ENST00000216484 MT1FP04733 61 aa5.17□□□□□ -1.58
SPTLC2-201ENST00000216484 DNAH17Q9UFH2 4485 aa5.17□□□□□ -1.58
SPTLC2-201ENST00000216484 LCE2BO14633 110 aa5.17□□□□□ -1.58
SPTLC2-201ENST00000216484 KRTAP19-4Q3LI73 84 aa5.17□□□□□ -1.58
SPTLC2-201ENST00000216484 VPS13DQ5THJ4 4388 aa5.14□□□□□ -1.59
SPTLC2-201ENST00000216484 LCE3DQ9BYE3 92 aa5.11□□□□□ -1.59
SPTLC2-201ENST00000216484 DNAH11Q96DT5 4516 aa5.05□□□□□ -1.6
SPTLC2-201ENST00000216484 DYNC2H1Q8NCM8 4307 aaKnown RBP5.04□□□□□ -1.6
SPTLC2-201ENST00000216484 LCE3EQ5T5B0 92 aa4.98□□□□□ -1.61
SPTLC2-201ENST00000216484 PKHD1L1Q86WI1 4243 aa4.96□□□□□ -1.62
SPTLC2-201ENST00000216484 PKHD1P08F94 4074 aa4.92□□□□□ -1.62
SPTLC2-201ENST00000216484 LCE2CQ5TA81 110 aa4.89□□□□□ -1.63
SPTLC2-201ENST00000216484 PKD1P98161 4303 aa4.87□□□□□ -1.63
SPTLC2-201ENST00000216484 STARD9Q9P2P6 4700 aa4.86□□□□□ -1.63
SPTLC2-201ENST00000216484 MT1XP80297 61 aa4.81□□□□□ -1.64
SPTLC2-201ENST00000216484 PRM1P04553 51 aa4.79□□□□□ -1.64
SPTLC2-201ENST00000216484 PLECQ15149 4684 aaKnown RBP4.79□□□□□ -1.64
SPTLC2-201ENST00000216484 LCE2DQ5TA82 110 aaPredicted RBP4.78□□□□□ -1.64
SPTLC2-201ENST00000216484 KRTAP4-8A0A0G2JLE6 195 aa4.77□□□□□ -1.65
SPTLC2-201ENST00000216484 KRTAP4-8Q9BYQ9 185 aa4.77□□□□□ -1.65
SPTLC2-201ENST00000216484 DNAH5Q8TE73 4624 aa4.74□□□□□ -1.65
SPTLC2-201ENST00000216484 FAT1Q14517 4588 aa4.73□□□□□ -1.65
SPTLC2-201ENST00000216484 KRTAP19-8Q3LI54 63 aa4.72□□□□□ -1.65
SPTLC2-201ENST00000216484 KRTAP19-1Q8IUB9 90 aa4.72□□□□□ -1.65
SPTLC2-201ENST00000216484 APOBP04114 4563 aaKnown RBP4.71□□□□□ -1.66
SPTLC2-201ENST00000216484 MT4P47944 62 aa4.71□□□□□ -1.66
SPTLC2-201ENST00000216484 LCE1BQ5T7P3 118 aa4.69□□□□□ -1.66
SPTLC2-201ENST00000216484 SPRR5A0A1B0GTR4 108 aa4.68□□□□□ -1.66
SPTLC2-201ENST00000216484 SACSQ9NZJ4 4579 aa4.67□□□□□ -1.66
SPTLC2-201ENST00000216484 LRP1BQ9NZR2 4599 aa4.67□□□□□ -1.66
SPTLC2-201ENST00000216484 LCE1DQ5T752 114 aa4.63□□□□□ -1.67
SPTLC2-201ENST00000216484 TNXBP22105 4242 aa4.61□□□□□ -1.67
SPTLC2-201ENST00000216484 LPAP08519 4548 aa4.6□□□□□ -1.67
SPTLC2-201ENST00000216484 MT3P25713 68 aa4.6□□□□□ -1.67
SPTLC2-201ENST00000216484 FAT3Q8TDW7 4589 aa4.58□□□□□ -1.68
SPTLC2-201ENST00000216484 KRTAP19-3Q7Z4W3 81 aa4.57□□□□□ -1.68
SPTLC2-201ENST00000216484 LRP1Q07954 4544 aaKnown RBP4.56□□□□□ -1.68
SPTLC2-201ENST00000216484 MT1LQ93083 61 aa4.55□□□□□ -1.68
SPTLC2-201ENST00000216484 KRTAP4-7Q9BYR0 210 aa4.55□□□□□ -1.68
SPTLC2-201ENST00000216484 MT1BP07438 61 aa4.52□□□□□ -1.69
SPTLC2-201ENST00000216484 KRTAP9-8Q9BYQ0 159 aa4.47□□□□□ -1.69
SPTLC2-201ENST00000216484 HSPG2P98160 4391 aa4.46□□□□□ -1.7
SPTLC2-201ENST00000216484 DYNC1H1Q14204 4646 aaKnown RBP4.43□□□□□ -1.7
SPTLC2-201ENST00000216484 LOC100996750A0A140TA64 210 aa4.43□□□□□ -1.7
SPTLC2-201ENST00000216484 MYCBP2O75592 4640 aa4.4□□□□□ -1.71
SPTLC2-201ENST00000216484 LCE5AQ5TCM9 118 aa4.39□□□□□ -1.71
SPTLC2-201ENST00000216484 MT1EP04732 61 aa4.37□□□□□ -1.71
SPTLC2-201ENST00000216484 KRTAP9-3Q9BYQ3 159 aa4.34□□□□□ -1.71
SPTLC2-201ENST00000216484 MT1MQ8N339 61 aa4.28□□□□□ -1.72
SPTLC2-201ENST00000216484 SYNE2Q8WXH0 6885 aaKnown RBP4.27□□□□□ -1.73
SPTLC2-201ENST00000216484 KRTAP17-1Q9BYP8 105 aa4.26□□□□□ -1.73
SPTLC2-201ENST00000216484 KRTAP4-3Q9BYR4 195 aa4.24□□□□□ -1.73
SPTLC2-201ENST00000216484 KRTAP4-9Q9BYQ8 210 aa4.22□□□□□ -1.73
SPTLC2-201ENST00000216484 LCE1CQ5T751 118 aa4.21□□□□□ -1.74
SPTLC2-201ENST00000216484 LCE1EQ5T753 118 aa4.21□□□□□ -1.74
SPTLC2-201ENST00000216484 LCE1FQ5T754 118 aa4.21□□□□□ -1.74
SPTLC2-201ENST00000216484 LCE1AQ5T7P2 110 aa4.21□□□□□ -1.74
SPTLC2-201ENST00000216484 KRTAP2-3P0C7H8 128 aa4.09□□□□□ -1.75
SPTLC2-201ENST00000216484 KRTAP2-4Q9BYR9 128 aa4.09□□□□□ -1.75
SPTLC2-201ENST00000216484 KRTAP2-1Q9BYU5 128 aa4.09□□□□□ -1.75
SPTLC2-201ENST00000216484 KRTAP19-6Q3LI70 58 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms