RNA–Protein interactions for RNA: ENST00000216288.11

MARK3-201, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-201ENST00000216288 RPS29P62273 56 aaKnown RBP6.43□□□□□ -1.38
MARK3-201ENST00000216288 LINC01554Q52M75 96 aa6.43□□□□□ -1.38
MARK3-201ENST00000216288 LRP2P98164 4655 aa6.41□□□□□ -1.38
MARK3-201ENST00000216288 H1FX-AS1Q4G0G2 97 aa6.4□□□□□ -1.38
MARK3-201ENST00000216288 A0A0D9SG42 100 aa6.4□□□□□ -1.39
MARK3-201ENST00000216288 KRTAP10-8P60410 259 aa6.39□□□□□ -1.39
MARK3-201ENST00000216288 COX6B2Q6YFQ2 88 aa6.38□□□□□ -1.39
MARK3-201ENST00000216288 RYR1P21817 5038 aa6.38□□□□□ -1.39
MARK3-201ENST00000216288 KRTAP17-1Q9BYP8 105 aa6.36□□□□□ -1.39
MARK3-201ENST00000216288 Q5VSD8 79 aa6.33□□□□□ -1.4
MARK3-201ENST00000216288 KRTAP13-4Q3LI77 160 aa6.3□□□□□ -1.4
MARK3-201ENST00000216288 ABCA13Q86UQ4 5058 aa6.3□□□□□ -1.4
MARK3-201ENST00000216288 KRTAP3-3Q9BYR6 98 aa6.28□□□□□ -1.4
MARK3-201ENST00000216288 EPPK1P58107 5090 aaKnown RBP6.28□□□□□ -1.4
MARK3-201ENST00000216288 XP32Q5T750 250 aa6.27□□□□□ -1.41
MARK3-201ENST00000216288 P0C880 135 aa6.25□□□□□ -1.41
MARK3-201ENST00000216288 KRTAP10-6P60371 365 aaPredicted RBP6.25□□□□□ -1.41
MARK3-201ENST00000216288 RPL37P61927 97 aaKnown RBP6.22□□□□□ -1.41
MARK3-201ENST00000216288 KRTAP25-1Q3LHN0 102 aa6.22□□□□□ -1.41
MARK3-201ENST00000216288 S4R3F8 94 aa6.21□□□□□ -1.42
MARK3-201ENST00000216288 K7ERS5 55 aa6.2□□□□□ -1.42
MARK3-201ENST00000216288 KRTAP3-2Q9BYR7 98 aa6.19□□□□□ -1.42
MARK3-201ENST00000216288 C10orf95Q9H7T3 257 aa6.17□□□□□ -1.42
MARK3-201ENST00000216288 SPINT4Q6UDR6 99 aa6.13□□□□□ -1.43
MARK3-201ENST00000216288 MT1HL1P0DM35 61 aa6.11□□□□□ -1.43
MARK3-201ENST00000216288 ROMO1P60602 79 aa6.1□□□□□ -1.43
MARK3-201ENST00000216288 MUC2Q02817 5179 aa6.1□□□□□ -1.43
MARK3-201ENST00000216288 KRTAP12-2P59991 146 aa6.09□□□□□ -1.44
MARK3-201ENST00000216288 TPRXLQ17RH7 258 aa6.06□□□□□ -1.44
MARK3-201ENST00000216288 H3BS24 57 aa6.05□□□□□ -1.44
MARK3-201ENST00000216288 KRTAP4-5Q9BYR2 181 aa6.04□□□□□ -1.44
MARK3-201ENST00000216288 KRTAP12-1P59990 96 aa5.96□□□□□ -1.46
MARK3-201ENST00000216288 HERC2O95714 4834 aa5.94□□□□□ -1.46
MARK3-201ENST00000216288 M0QZ58 72 aa5.9□□□□□ -1.47
MARK3-201ENST00000216288 LORP23490 312 aaPredicted RBP5.88□□□□□ -1.47
MARK3-201ENST00000216288 MUC17Q685J3 4493 aa5.86□□□□□ -1.47
MARK3-201ENST00000216288 J3QL48 77 aa5.85□□□□□ -1.47
MARK3-201ENST00000216288 R4GN34 69 aa5.84□□□□□ -1.48
MARK3-201ENST00000216288 KRTAP4-1Q9BYQ7 146 aa5.83□□□□□ -1.48
MARK3-201ENST00000216288 HERC1Q15751 4861 aa5.82□□□□□ -1.48
MARK3-201ENST00000216288 FAT4Q6V0I7 4981 aa5.8□□□□□ -1.48
MARK3-201ENST00000216288 NDUFAF8A1L188 74 aa5.75□□□□□ -1.49
MARK3-201ENST00000216288 PCLOQ9Y6V0 5065 aa5.7□□□□□ -1.5
MARK3-201ENST00000216288 RNF213Q63HN8 5207 aa5.68□□□□□ -1.5
MARK3-201ENST00000216288 SEC61BP60468 96 aaKnown RBP5.68□□□□□ -1.5
MARK3-201ENST00000216288 KRTAP15-1Q3LI76 137 aa5.67□□□□□ -1.5
MARK3-201ENST00000216288 CAMK2N1Q7Z7J9 78 aa5.59□□□□□ -1.51
MARK3-201ENST00000216288 FLGP20930 4061 aaPredicted RBP5.55□□□□□ -1.52
MARK3-201ENST00000216288 KRTAP19-2Q3LHN2 52 aa5.54□□□□□ -1.52
MARK3-201ENST00000216288 BIRC6Q9NR09 4857 aa5.52□□□□□ -1.53
MARK3-201ENST00000216288 UBR4Q5T4S7 5183 aa5.51□□□□□ -1.53
MARK3-201ENST00000216288 HMCN2Q8NDA2 5059 aa5.5□□□□□ -1.53
MARK3-201ENST00000216288 PLAC4Q8WY50 150 aa5.47□□□□□ -1.53
MARK3-201ENST00000216288 M0R2T5 61 aa5.33□□□□□ -1.56
MARK3-201ENST00000216288 A0A0A0MQY5 61 aa5.26□□□□□ -1.57
MARK3-201ENST00000216288 TNP1P09430 55 aa5.26□□□□□ -1.57
MARK3-201ENST00000216288 LCE2CQ5TA81 110 aa5.24□□□□□ -1.57
MARK3-201ENST00000216288 LCE2DQ5TA82 110 aaPredicted RBP5.24□□□□□ -1.57
MARK3-201ENST00000216288 LUZP6Q538Z0 58 aa5.21□□□□□ -1.58
MARK3-201ENST00000216288 PP632Q6XCG6 107 aa5.2□□□□□ -1.58
MARK3-201ENST00000216288 KRTAP19-1Q8IUB9 90 aa5.17□□□□□ -1.58
MARK3-201ENST00000216288 KRTAP10-10P60014 251 aa5.16□□□□□ -1.58
MARK3-201ENST00000216288 MT1HP80294 61 aa5.12□□□□□ -1.59
MARK3-201ENST00000216288 USH2AO75445 5202 aa5.12□□□□□ -1.59
MARK3-201ENST00000216288 MT1FP04733 61 aa5.11□□□□□ -1.59
MARK3-201ENST00000216288 LCE3AQ5TA76 89 aa5.08□□□□□ -1.6
MARK3-201ENST00000216288 SPRR2GQ9BYE4 73 aa5.07□□□□□ -1.6
MARK3-201ENST00000216288 MT2AP02795 61 aa5.06□□□□□ -1.6
MARK3-201ENST00000216288 KMT2DO14686 5537 aa5.04□□□□□ -1.6
MARK3-201ENST00000216288 KRTAP9-8Q9BYQ0 159 aa4.99□□□□□ -1.61
MARK3-201ENST00000216288 MT1BP07438 61 aa4.89□□□□□ -1.63
MARK3-201ENST00000216288 SPRR5A0A1B0GTR4 108 aa4.88□□□□□ -1.63
MARK3-201ENST00000216288 KRTAP10-5P60370 271 aa4.88□□□□□ -1.63
MARK3-201ENST00000216288 MT1XP80297 61 aa4.88□□□□□ -1.63
MARK3-201ENST00000216288 KRTAP23-1A1A580 65 aa4.87□□□□□ -1.63
MARK3-201ENST00000216288 FSIP2Q5CZC0 6907 aa4.87□□□□□ -1.63
MARK3-201ENST00000216288 KRTAP10-7P60409 375 aaPredicted RBP4.85□□□□□ -1.63
MARK3-201ENST00000216288 KRTAP10-12P60413 245 aa4.79□□□□□ -1.64
MARK3-201ENST00000216288 KRTAP19-8Q3LI54 63 aa4.79□□□□□ -1.64
MARK3-201ENST00000216288 KRTAP12-3P60328 96 aa4.77□□□□□ -1.65
MARK3-201ENST00000216288 KRTAP8-1Q8IUC2 63 aa4.76□□□□□ -1.65
MARK3-201ENST00000216288 KRTAP9-3Q9BYQ3 159 aa4.75□□□□□ -1.65
MARK3-201ENST00000216288 LCE2AQ5TA79 106 aaPredicted RBP4.69□□□□□ -1.66
MARK3-201ENST00000216288 LCE2BO14633 110 aa4.66□□□□□ -1.66
MARK3-201ENST00000216288 KRTAP4-8A0A0G2JLE6 195 aa4.65□□□□□ -1.66
MARK3-201ENST00000216288 KRTAP4-8Q9BYQ9 185 aa4.65□□□□□ -1.66
MARK3-201ENST00000216288 KRTAP19-5Q3LI72 72 aa4.62□□□□□ -1.67
MARK3-201ENST00000216288 PRO2289Q9P1D8 64 aa4.57□□□□□ -1.68
MARK3-201ENST00000216288 KRTAP4-7Q9BYR0 210 aa4.52□□□□□ -1.69
MARK3-201ENST00000216288 SSPOA2VEC9 5147 aa4.49□□□□□ -1.69
MARK3-201ENST00000216288 LCE3CQ5T5A8 94 aa4.45□□□□□ -1.7
MARK3-201ENST00000216288 DSTQ03001 7570 aaKnown RBP4.45□□□□□ -1.7
MARK3-201ENST00000216288 KRTAP9-6A8MVA2 160 aa4.44□□□□□ -1.7
MARK3-201ENST00000216288 MUC12Q9UKN1 5478 aa4.43□□□□□ -1.7
MARK3-201ENST00000216288 FCGBPQ9Y6R7 5405 aaPredicted RBP4.36□□□□□ -1.71
MARK3-201ENST00000216288 KRTAP19-7Q3SYF9 63 aa4.34□□□□□ -1.72
MARK3-201ENST00000216288 INE1O15225 51 aa4.28□□□□□ -1.72
MARK3-201ENST00000216288 KRTAP4-3Q9BYR4 195 aa4.22□□□□□ -1.73
MARK3-201ENST00000216288 LOC100996750A0A140TA64 210 aa4.21□□□□□ -1.74
MARK3-201ENST00000216288 CRCT1Q9UGL9 99 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms