RNA–Protein interactions for RNA: ENST00000216121.11

NIPSNAP1-201, Transcript of nipsnap homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPSNAP1, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-201ENST00000216121 DMBT1Q9UGM3 2413 aaPredicted RBP11.44□□□□□ -0.58
NIPSNAP1-201ENST00000216121 PRAC1Q96KF2 57 aa11.43□□□□□ -0.58
NIPSNAP1-201ENST00000216121 KRTAP17-1Q9BYP8 105 aa11.41□□□□□ -0.58
NIPSNAP1-201ENST00000216121 RYR3Q15413 4870 aa11.37□□□□□ -0.59
NIPSNAP1-201ENST00000216121 MT1HL1P0DM35 61 aa11.33□□□□□ -0.6
NIPSNAP1-201ENST00000216121 KRTAP3-3Q9BYR6 98 aa11.31□□□□□ -0.6
NIPSNAP1-201ENST00000216121 MYCBP2O75592 4640 aa11.29□□□□□ -0.6
NIPSNAP1-201ENST00000216121 KIAA1109Q2LD37 5005 aa11.22□□□□□ -0.61
NIPSNAP1-201ENST00000216121 S4R3F8 94 aa11.2□□□□□ -0.62
NIPSNAP1-201ENST00000216121 KRTAP10-6P60371 365 aaPredicted RBP11.19□□□□□ -0.62
NIPSNAP1-201ENST00000216121 CSAG1Q6PB30 78 aa11.15□□□□□ -0.63
NIPSNAP1-201ENST00000216121 KRTAP3-2Q9BYR7 98 aa11.12□□□□□ -0.63
NIPSNAP1-201ENST00000216121 K7ERS5 55 aa11.07□□□□□ -0.64
NIPSNAP1-201ENST00000216121 TPRXLQ17RH7 258 aa11.07□□□□□ -0.64
NIPSNAP1-201ENST00000216121 LINC01554Q52M75 96 aa11.06□□□□□ -0.64
NIPSNAP1-201ENST00000216121 KRTAP13-4Q3LI77 160 aa11.02□□□□□ -0.65
NIPSNAP1-201ENST00000216121 LRP2P98164 4655 aa10.96□□□□□ -0.66
NIPSNAP1-201ENST00000216121 EPPK1P58107 5090 aaKnown RBP10.95□□□□□ -0.66
NIPSNAP1-201ENST00000216121 P0C880 135 aa10.95□□□□□ -0.66
NIPSNAP1-201ENST00000216121 LPAP08519 4548 aa10.95□□□□□ -0.66
NIPSNAP1-201ENST00000216121 KRTAP25-1Q3LHN0 102 aa10.89□□□□□ -0.67
NIPSNAP1-201ENST00000216121 A0A0D9SG42 100 aa10.88□□□□□ -0.67
NIPSNAP1-201ENST00000216121 KRTAP4-5Q9BYR2 181 aa10.83□□□□□ -0.68
NIPSNAP1-201ENST00000216121 ROMO1P60602 79 aa10.81□□□□□ -0.68
NIPSNAP1-201ENST00000216121 ABCA13Q86UQ4 5058 aa10.78□□□□□ -0.68
NIPSNAP1-201ENST00000216121 CRIPTQ9P021 101 aa10.69□□□□□ -0.7
NIPSNAP1-201ENST00000216121 M0QZ58 72 aa10.66□□□□□ -0.7
NIPSNAP1-201ENST00000216121 KRTAP12-2P59991 146 aa10.65□□□□□ -0.7
NIPSNAP1-201ENST00000216121 SEC61BP60468 96 aaKnown RBP10.65□□□□□ -0.7
NIPSNAP1-201ENST00000216121 KRTAP12-1P59990 96 aa10.61□□□□□ -0.71
NIPSNAP1-201ENST00000216121 MUC17Q685J3 4493 aa10.56□□□□□ -0.72
NIPSNAP1-201ENST00000216121 SPINT4Q6UDR6 99 aa10.54□□□□□ -0.72
NIPSNAP1-201ENST00000216121 J3QL48 77 aa10.5□□□□□ -0.73
NIPSNAP1-201ENST00000216121 KRTAP4-1Q9BYQ7 146 aa10.49□□□□□ -0.73
NIPSNAP1-201ENST00000216121 HERC2O95714 4834 aa10.39□□□□□ -0.75
NIPSNAP1-201ENST00000216121 R4GN34 69 aa10.37□□□□□ -0.75
NIPSNAP1-201ENST00000216121 C10orf95Q9H7T3 257 aa10.37□□□□□ -0.75
NIPSNAP1-201ENST00000216121 KRTAP19-2Q3LHN2 52 aa10.34□□□□□ -0.75
NIPSNAP1-201ENST00000216121 LORP23490 312 aaPredicted RBP10.26□□□□□ -0.77
NIPSNAP1-201ENST00000216121 BIRC6Q9NR09 4857 aa10.14□□□□□ -0.79
NIPSNAP1-201ENST00000216121 FLGP20930 4061 aaPredicted RBP10.07□□□□□ -0.8
NIPSNAP1-201ENST00000216121 MUC2Q02817 5179 aa9.99□□□□□ -0.81
NIPSNAP1-201ENST00000216121 KRTAP15-1Q3LI76 137 aa9.91□□□□□ -0.82
NIPSNAP1-201ENST00000216121 HERC1Q15751 4861 aa9.84□□□□□ -0.83
NIPSNAP1-201ENST00000216121 HMCN2Q8NDA2 5059 aa9.84□□□□□ -0.83
NIPSNAP1-201ENST00000216121 H3BS24 57 aa9.83□□□□□ -0.84
NIPSNAP1-201ENST00000216121 CAMK2N1Q7Z7J9 78 aa9.82□□□□□ -0.84
NIPSNAP1-201ENST00000216121 PCLOQ9Y6V0 5065 aa9.78□□□□□ -0.84
NIPSNAP1-201ENST00000216121 LCE2CQ5TA81 110 aa9.74□□□□□ -0.85
NIPSNAP1-201ENST00000216121 PP632Q6XCG6 107 aa9.65□□□□□ -0.86
NIPSNAP1-201ENST00000216121 NDUFAF8A1L188 74 aa9.55□□□□□ -0.88
NIPSNAP1-201ENST00000216121 PLAC4Q8WY50 150 aa9.55□□□□□ -0.88
NIPSNAP1-201ENST00000216121 SPRR2GQ9BYE4 73 aa9.52□□□□□ -0.88
NIPSNAP1-201ENST00000216121 FAT4Q6V0I7 4981 aa9.52□□□□□ -0.89
NIPSNAP1-201ENST00000216121 TNP1P09430 55 aa9.48□□□□□ -0.89
NIPSNAP1-201ENST00000216121 MT1HP80294 61 aa9.47□□□□□ -0.89
NIPSNAP1-201ENST00000216121 KRTAP19-1Q8IUB9 90 aa9.46□□□□□ -0.9
NIPSNAP1-201ENST00000216121 M0R2T5 61 aa9.44□□□□□ -0.9
NIPSNAP1-201ENST00000216121 RNF213Q63HN8 5207 aa9.42□□□□□ -0.9
NIPSNAP1-201ENST00000216121 KRTAP23-1A1A580 65 aa9.41□□□□□ -0.9
NIPSNAP1-201ENST00000216121 UBR4Q5T4S7 5183 aa9.31□□□□□ -0.92
NIPSNAP1-201ENST00000216121 MT2AP02795 61 aa9.3□□□□□ -0.92
NIPSNAP1-201ENST00000216121 MT1FP04733 61 aa9.28□□□□□ -0.92
NIPSNAP1-201ENST00000216121 KRTAP10-10P60014 251 aa9.26□□□□□ -0.93
NIPSNAP1-201ENST00000216121 KRTAP9-8Q9BYQ0 159 aa9.25□□□□□ -0.93
NIPSNAP1-201ENST00000216121 KRTAP19-8Q3LI54 63 aa9.12□□□□□ -0.95
NIPSNAP1-201ENST00000216121 LUZP6Q538Z0 58 aa9.05□□□□□ -0.96
NIPSNAP1-201ENST00000216121 MT1BP07438 61 aa8.98□□□□□ -0.97
NIPSNAP1-201ENST00000216121 SPRR5A0A1B0GTR4 108 aa8.97□□□□□ -0.97
NIPSNAP1-201ENST00000216121 LCE3AQ5TA76 89 aa8.97□□□□□ -0.97
NIPSNAP1-201ENST00000216121 KRTAP10-5P60370 271 aa8.9□□□□□ -0.98
NIPSNAP1-201ENST00000216121 MT1XP80297 61 aa8.89□□□□□ -0.99
NIPSNAP1-201ENST00000216121 KRTAP9-3Q9BYQ3 159 aa8.88□□□□□ -0.99
NIPSNAP1-201ENST00000216121 A0A0A0MQY5 61 aa8.86□□□□□ -0.99
NIPSNAP1-201ENST00000216121 KRTAP8-1Q8IUC2 63 aa8.8□□□□□ -1
NIPSNAP1-201ENST00000216121 KRTAP10-12P60413 245 aa8.67□□□□□ -1.02
NIPSNAP1-201ENST00000216121 KRTAP10-7P60409 375 aaPredicted RBP8.6□□□□□ -1.03
NIPSNAP1-201ENST00000216121 PRO2289Q9P1D8 64 aa8.59□□□□□ -1.03
NIPSNAP1-201ENST00000216121 KRTAP12-3P60328 96 aa8.57□□□□□ -1.04
NIPSNAP1-201ENST00000216121 LCE2BO14633 110 aa8.51□□□□□ -1.05
NIPSNAP1-201ENST00000216121 LCE2AQ5TA79 106 aaPredicted RBP8.45□□□□□ -1.06
NIPSNAP1-201ENST00000216121 KRTAP19-5Q3LI72 72 aa8.23□□□□□ -1.09
NIPSNAP1-201ENST00000216121 USH2AO75445 5202 aa8.21□□□□□ -1.1
NIPSNAP1-201ENST00000216121 KRTAP4-8A0A0G2JLE6 195 aa8.07□□□□□ -1.12
NIPSNAP1-201ENST00000216121 KRTAP4-8Q9BYQ9 185 aa8.07□□□□□ -1.12
NIPSNAP1-201ENST00000216121 LCE3CQ5T5A8 94 aa8.07□□□□□ -1.12
NIPSNAP1-201ENST00000216121 KMT2DO14686 5537 aa8.06□□□□□ -1.12
NIPSNAP1-201ENST00000216121 KRTAP19-7Q3SYF9 63 aa7.93□□□□□ -1.14
NIPSNAP1-201ENST00000216121 SSPOA2VEC9 5147 aa7.81□□□□□ -1.16
NIPSNAP1-201ENST00000216121 INE1O15225 51 aa7.78□□□□□ -1.16
NIPSNAP1-201ENST00000216121 KRTAP19-4Q3LI73 84 aa7.77□□□□□ -1.17
NIPSNAP1-201ENST00000216121 KRTAP9-6A8MVA2 160 aa7.75□□□□□ -1.17
NIPSNAP1-201ENST00000216121 MT1EP04732 61 aa7.71□□□□□ -1.18
NIPSNAP1-201ENST00000216121 KRTAP19-6Q3LI70 58 aa7.71□□□□□ -1.18
NIPSNAP1-201ENST00000216121 MT1LQ93083 61 aa7.68□□□□□ -1.18
NIPSNAP1-201ENST00000216121 KRTAP4-7Q9BYR0 210 aa7.66□□□□□ -1.18
NIPSNAP1-201ENST00000216121 KRTAP2-3P0C7H8 128 aa7.48□□□□□ -1.21
NIPSNAP1-201ENST00000216121 KRTAP2-4Q9BYR9 128 aa7.48□□□□□ -1.21
NIPSNAP1-201ENST00000216121 KRTAP2-1Q9BYU5 128 aa7.48□□□□□ -1.21
NIPSNAP1-201ENST00000216121 FSIP2Q5CZC0 6907 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms