RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Uqcrfs1Q9CR68 274 aa11.91□□□□□ -0.5
Vcan-201ENSMUST00000109543 Dido1Q8C9B9 2256 aaKnown RBP11.91□□□□□ -0.5
Vcan-201ENSMUST00000109543 Smad7O35253 426 aa11.91□□□□□ -0.5
Vcan-201ENSMUST00000109543 P04219 140 aa11.91□□□□□ -0.5
Vcan-201ENSMUST00000109543 Lcn2P11672 200 aa11.91□□□□□ -0.5
Vcan-201ENSMUST00000109543 Tmem129Q8K304 362 aa11.91□□□□□ -0.5
Vcan-201ENSMUST00000109543 Olfr1012Q8VFJ7 311 aa11.91□□□□□ -0.5
Vcan-201ENSMUST00000109543 Gtsf1lQ9CWD0 151 aa11.91□□□□□ -0.5
Vcan-201ENSMUST00000109543 Gm9195A0A140LHT4 2805 aa11.9□□□□□ -0.5
Vcan-201ENSMUST00000109543 Esp38A8R0X1 80 aa11.9□□□□□ -0.5
Vcan-201ENSMUST00000109543 Gm20458E9PXJ7 78 aa11.9□□□□□ -0.5
Vcan-201ENSMUST00000109543 Srsf2Q62093 221 aaKnown RBP11.9□□□□□ -0.5
Vcan-201ENSMUST00000109543 Zfp109A0A0U1RPC5 652 aa11.89□□□□□ -0.51
Vcan-201ENSMUST00000109543 Omt2bD3YX29 119 aa11.89□□□□□ -0.51
Vcan-201ENSMUST00000109543 Tcte2E9PY37 120 aa11.89□□□□□ -0.51
Vcan-201ENSMUST00000109543 Gm11027G8JL69 66 aa11.89□□□□□ -0.51
Vcan-201ENSMUST00000109543 Foxc2Q61850 494 aa11.89□□□□□ -0.51
Vcan-201ENSMUST00000109543 Atp6v0bQ91V37 205 aa11.89□□□□□ -0.51
Vcan-201ENSMUST00000109543 Gm15294V9GXA7 121 aa11.89□□□□□ -0.51
Vcan-201ENSMUST00000109543 Ighv8-6A0A0A6YXA3 118 aa11.89□□□□□ -0.51
Vcan-201ENSMUST00000109543 Trav14n-2A0A0G2JDF5 121 aa11.89□□□□□ -0.51
Vcan-201ENSMUST00000109543 Gm10521E9PZK0 135 aa11.89□□□□□ -0.51
Vcan-201ENSMUST00000109543 Defb18Q30KP5 85 aa11.89□□□□□ -0.51
Vcan-201ENSMUST00000109543 Prickle3Q80VL3 624 aa11.89□□□□□ -0.51
Vcan-201ENSMUST00000109543 SNORCQ9CXL7 121 aa11.89□□□□□ -0.51
Vcan-201ENSMUST00000109543 Ssbp1Q9CYR0 152 aaKnown RBP11.89□□□□□ -0.51
Vcan-201ENSMUST00000109543 Klf13Q9JJZ6 289 aa11.89□□□□□ -0.51
Vcan-201ENSMUST00000109543 Gm17455G3UW87 128 aa11.88□□□□□ -0.51
Vcan-201ENSMUST00000109543 Sprr3O09116 238 aa11.88□□□□□ -0.51
Vcan-201ENSMUST00000109543 PlaurP35456 327 aa11.88□□□□□ -0.51
Vcan-201ENSMUST00000109543 Hyls1Q9CXX0 307 aa11.88□□□□□ -0.51
Vcan-201ENSMUST00000109543 Bex1Q9R224 128 aa11.88□□□□□ -0.51
Vcan-201ENSMUST00000109543 LystP97412 3788 aa11.88□□□□□ -0.51
Vcan-201ENSMUST00000109543 Ighv1-80A0A075B5Y3 117 aa11.88□□□□□ -0.51
Vcan-201ENSMUST00000109543 Gm5157A0A087WRH8 301 aa11.88□□□□□ -0.51
Vcan-201ENSMUST00000109543 Ndufa4l2Q4FZG9 87 aa11.88□□□□□ -0.51
Vcan-201ENSMUST00000109543 Zfp248Q640N4 576 aa11.88□□□□□ -0.51
Vcan-201ENSMUST00000109543 Hspe1Q64433 102 aaKnown RBP11.88□□□□□ -0.51
Vcan-201ENSMUST00000109543 Olfr1199Q8VF94 310 aa11.88□□□□□ -0.51
Vcan-201ENSMUST00000109543 Tppp3Q9CRB6 176 aaKnown RBP11.88□□□□□ -0.51
Vcan-201ENSMUST00000109543 Dpm3Q9D1Q4 92 aa11.88□□□□□ -0.51
Vcan-201ENSMUST00000109543 Igkv4-57-1A0A075B5M4 119 aa11.87□□□□□ -0.51
Vcan-201ENSMUST00000109543 Ighv1-58A0A075B5W9 117 aa11.87□□□□□ -0.51
Vcan-201ENSMUST00000109543 7420426K07RikQ3UX66 186 aa11.87□□□□□ -0.51
Vcan-201ENSMUST00000109543 AY761185Q5ERI8 94 aa11.87□□□□□ -0.51
Vcan-201ENSMUST00000109543 Crip3Q6Q6R3 243 aa11.87□□□□□ -0.51
Vcan-201ENSMUST00000109543 Vmn1r216Q8R257 298 aa11.87□□□□□ -0.51
Vcan-201ENSMUST00000109543 Trav19A0A0B4J1K4 119 aa11.87□□□□□ -0.51
Vcan-201ENSMUST00000109543 Trav3n-3A0A0G2JEM0 114 aa11.87□□□□□ -0.51
Vcan-201ENSMUST00000109543 Gm20517G3UVU6 152 aa11.87□□□□□ -0.51
Vcan-201ENSMUST00000109543 P01756 117 aa11.87□□□□□ -0.51
Vcan-201ENSMUST00000109543 P01757 117 aa11.87□□□□□ -0.51
Vcan-201ENSMUST00000109543 Cd24P24807 76 aa11.87□□□□□ -0.51
Vcan-201ENSMUST00000109543 CnfnQ6PCW6 111 aa11.87□□□□□ -0.51
Vcan-201ENSMUST00000109543 Rnf185Q91YT2 192 aa11.87□□□□□ -0.51
Vcan-201ENSMUST00000109543 Ufc1Q9CR09 167 aa11.87□□□□□ -0.51
Vcan-201ENSMUST00000109543 Q9D131 166 aa11.87□□□□□ -0.51
Vcan-201ENSMUST00000109543 AplnrQ9WV08 377 aa11.87□□□□□ -0.51
Vcan-201ENSMUST00000109543 Ins1P01325 108 aa11.86□□□□□ -0.51
Vcan-201ENSMUST00000109543 Ighv1-62-3P01754 117 aa11.86□□□□□ -0.51
Vcan-201ENSMUST00000109543 Khdc1aQ3UWR2 166 aa11.86□□□□□ -0.51
Vcan-201ENSMUST00000109543 Q4KKZ1 196 aa11.86□□□□□ -0.51
Vcan-201ENSMUST00000109543 Card19Q9D1I2 183 aa11.86□□□□□ -0.51
Vcan-201ENSMUST00000109543 Qrich2A0A140LIY9 2337 aa11.86□□□□□ -0.51
Vcan-201ENSMUST00000109543 Ighv1-23A0A0A6YVW3 117 aa11.86□□□□□ -0.51
Vcan-201ENSMUST00000109543 Igkv20-101-2A0A0G2JDU3 113 aa11.86□□□□□ -0.51
Vcan-201ENSMUST00000109543 Scgb1b3J3QJY4 93 aa11.86□□□□□ -0.51
Vcan-201ENSMUST00000109543 Fhl1P97447 280 aaKnown RBP11.86□□□□□ -0.51
Vcan-201ENSMUST00000109543 Q24JP4 165 aa11.86□□□□□ -0.51
Vcan-201ENSMUST00000109543 Ang5Q5GAN1 145 aa11.86□□□□□ -0.51
Vcan-201ENSMUST00000109543 Tctex1d1Q9D5I4 173 aa11.86□□□□□ -0.51
Vcan-201ENSMUST00000109543 Armcx4E9PWM3 2356 aa11.86□□□□□ -0.51
Vcan-201ENSMUST00000109543 Gm1968Q3T9I3 115 aa11.85□□□□□ -0.51
Vcan-201ENSMUST00000109543 Ang6Q5GAN0 147 aa11.85□□□□□ -0.51
Vcan-201ENSMUST00000109543 Odf1Q61999 247 aa11.85□□□□□ -0.51
Vcan-201ENSMUST00000109543 PdpnQ62011 172 aa11.85□□□□□ -0.51
Vcan-201ENSMUST00000109543 D630044L22RikQ8C701 164 aa11.85□□□□□ -0.51
Vcan-201ENSMUST00000109543 Rpl11Q9CXW4 178 aaKnown RBP11.85□□□□□ -0.51
Vcan-201ENSMUST00000109543 1520401A03RikA0A0J9YVH6 598 aa11.85□□□□□ -0.51
Vcan-201ENSMUST00000109543 Usmg5Q78IK2 58 aa11.85□□□□□ -0.51
Vcan-201ENSMUST00000109543 Fmc1Q9CR13 113 aa11.85□□□□□ -0.51
Vcan-201ENSMUST00000109543 Sdk1Q3UH53 2193 aa11.84□□□□□ -0.51
Vcan-201ENSMUST00000109543 Tstd1E9PY03 133 aa11.84□□□□□ -0.51
Vcan-201ENSMUST00000109543 Mrpl20Q9CQL4 149 aa11.84□□□□□ -0.51
Vcan-201ENSMUST00000109543 Gm28305F6U473 122 aa11.83□□□□□ -0.51
Vcan-201ENSMUST00000109543 Cox7a2lQ61387 111 aa11.83□□□□□ -0.51
Vcan-201ENSMUST00000109543 Spock3Q8BKV0 436 aa11.83□□□□□ -0.51
Vcan-201ENSMUST00000109543 TdhQ8K3F7 373 aa11.83□□□□□ -0.51
Vcan-201ENSMUST00000109543 PdfS4R2K0 231 aa11.83□□□□□ -0.51
Vcan-201ENSMUST00000109543 Ighv1-22A0A075B5U7 117 aa11.83□□□□□ -0.52
Vcan-201ENSMUST00000109543 Trav6-6A0A075B603 114 aa11.83□□□□□ -0.52
Vcan-201ENSMUST00000109543 Scgb1b19F6WYW0 93 aa11.83□□□□□ -0.52
Vcan-201ENSMUST00000109543 Gm10226O88253 85 aa11.83□□□□□ -0.52
Vcan-201ENSMUST00000109543 Tctex1d4Q8CDY7 219 aa11.83□□□□□ -0.52
Vcan-201ENSMUST00000109543 RhohQ9D3G9 191 aa11.83□□□□□ -0.52
Vcan-201ENSMUST00000109543 Trav6-4A0A075B6B4 115 aa11.82□□□□□ -0.52
Vcan-201ENSMUST00000109543 Ighv1-9A0A0A6YW37 117 aa11.82□□□□□ -0.52
Vcan-201ENSMUST00000109543 Igkv4-70A0A0B4J1I5 116 aa11.82□□□□□ -0.52
Vcan-201ENSMUST00000109543 A0A1Y7VMQ4 148 aa11.82□□□□□ -0.52
Vcan-201ENSMUST00000109543 Igsf23B2RTN2 239 aa11.82□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 89.1 ms