RNA–Protein interactions for RNA: ENSMUST00000107935.7

Shank1-202, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-202ENSMUST00000107935 Atp6v0e2Q91XE7 81 aa12.1□□□□□ -0.47
Shank1-202ENSMUST00000107935 Zfp646Q6NV66 1788 aa12.1□□□□□ -0.47
Shank1-202ENSMUST00000107935 Ighv1-69A0A0G2JFS5 117 aa12.1□□□□□ -0.47
Shank1-202ENSMUST00000107935 Gm19345G3UYD9 124 aa12.1□□□□□ -0.47
Shank1-202ENSMUST00000107935 Vmo1Q5SXG7 201 aa12.1□□□□□ -0.47
Shank1-202ENSMUST00000107935 March3Q8BRX9 218 aa12.1□□□□□ -0.47
Shank1-202ENSMUST00000107935 Brca1P48754 1812 aa12.1□□□□□ -0.47
Shank1-202ENSMUST00000107935 Pou2af1Q64693 256 aa12.1□□□□□ -0.47
Shank1-202ENSMUST00000107935 Igkv4-79A0A075B5L8 119 aa12.09□□□□□ -0.47
Shank1-202ENSMUST00000107935 Cd24P24807 76 aa12.09□□□□□ -0.47
Shank1-202ENSMUST00000107935 Lhfpl1Q80SV1 220 aa12.09□□□□□ -0.47
Shank1-202ENSMUST00000107935 Zc2hc1aQ8BJH1 324 aa12.09□□□□□ -0.47
Shank1-202ENSMUST00000107935 Sipa1l3G3X9J0 1776 aa12.09□□□□□ -0.47
Shank1-202ENSMUST00000107935 Rnf144bQ8BKD6 301 aa12.09□□□□□ -0.47
Shank1-202ENSMUST00000107935 Ighv1-23A0A0A6YVW3 117 aa12.09□□□□□ -0.47
Shank1-202ENSMUST00000107935 Tcl1b4P56844 120 aa12.09□□□□□ -0.47
Shank1-202ENSMUST00000107935 Iglc1A0A0G2JE99 106 aa12.08□□□□□ -0.47
Shank1-202ENSMUST00000107935 P01843 105 aa12.08□□□□□ -0.47
Shank1-202ENSMUST00000107935 Defb30Q30KN4 75 aa12.08□□□□□ -0.47
Shank1-202ENSMUST00000107935 SelenowP63300 88 aa12.08□□□□□ -0.48
Shank1-202ENSMUST00000107935 Zic4Q61467 341 aa12.08□□□□□ -0.48
Shank1-202ENSMUST00000107935 Lgals4Q8K419 326 aa12.08□□□□□ -0.48
Shank1-202ENSMUST00000107935 Shank3Q4ACU6 1730 aa12.08□□□□□ -0.48
Shank1-202ENSMUST00000107935 Vpreb2P13373 142 aa12.08□□□□□ -0.48
Shank1-202ENSMUST00000107935 Trav12d-3A0A075B6A4 115 aa12.08□□□□□ -0.48
Shank1-202ENSMUST00000107935 Igkv3-9A0A140T8P4 119 aa12.08□□□□□ -0.48
Shank1-202ENSMUST00000107935 Gm28539A0A087WSL9 92 aa12.07□□□□□ -0.48
Shank1-202ENSMUST00000107935 Defb29Q8BGW9 78 aa12.07□□□□□ -0.48
Shank1-202ENSMUST00000107935 Klk13Q8CGR6 276 aa12.07□□□□□ -0.48
Shank1-202ENSMUST00000107935 Ighv1-81A0A075B5Y4 117 aa12.07□□□□□ -0.48
Shank1-202ENSMUST00000107935 Lyg1Q9D7Q0 197 aa12.07□□□□□ -0.48
Shank1-202ENSMUST00000107935 Zdbf2Q5SS00 2493 aaKnown RBP12.07□□□□□ -0.48
Shank1-202ENSMUST00000107935 Defb33Q30KN3 62 aa12.06□□□□□ -0.48
Shank1-202ENSMUST00000107935 Prok2Q9QXU7 128 aa12.06□□□□□ -0.48
Shank1-202ENSMUST00000107935 Igkv8-16A0A0G2JDG9 121 aa12.06□□□□□ -0.48
Shank1-202ENSMUST00000107935 Znrd1Q791N7 123 aa12.06□□□□□ -0.48
Shank1-202ENSMUST00000107935 Ube2e2Q91W82 201 aa12.06□□□□□ -0.48
Shank1-202ENSMUST00000107935 Tmem14cQ9CQN6 114 aa12.06□□□□□ -0.48
Shank1-202ENSMUST00000107935 Igkv3-1A0A075B5P1 119 aa12.06□□□□□ -0.48
Shank1-202ENSMUST00000107935 Rpl35aO55142 110 aa12.06□□□□□ -0.48
Shank1-202ENSMUST00000107935 OtosQ8R448 89 aa12.06□□□□□ -0.48
Shank1-202ENSMUST00000107935 Thsd7aQ69ZU6 1645 aa12.06□□□□□ -0.48
Shank1-202ENSMUST00000107935 Gm9936Q8C864 160 aa12.06□□□□□ -0.48
Shank1-202ENSMUST00000107935 Gm10762Q9CZN6 115 aa12.06□□□□□ -0.48
Shank1-202ENSMUST00000107935 Ifitm1Q9D103 106 aa12.06□□□□□ -0.48
Shank1-202ENSMUST00000107935 Trav4d-3A0A075B625 110 aa12.05□□□□□ -0.48
Shank1-202ENSMUST00000107935 Tmem213Q08EA8 116 aa12.05□□□□□ -0.48
Shank1-202ENSMUST00000107935 Cxcl13O55038 109 aa12.05□□□□□ -0.48
Shank1-202ENSMUST00000107935 NynrinQ5DTZ0 1840 aa12.05□□□□□ -0.48
Shank1-202ENSMUST00000107935 DnlzQ9D113 177 aa12.05□□□□□ -0.48
Shank1-202ENSMUST00000107935 Myo16Q5DU14 1919 aa12.04□□□□□ -0.48
Shank1-202ENSMUST00000107935 Myo7aP97479 2215 aa12.04□□□□□ -0.48
Shank1-202ENSMUST00000107935 Cr2P19070 1025 aa12.04□□□□□ -0.48
Shank1-202ENSMUST00000107935 Gm4763Q8CFJ5 196 aa12.04□□□□□ -0.48
Shank1-202ENSMUST00000107935 Col4a3Q9QZS0 1669 aa12.04□□□□□ -0.48
Shank1-202ENSMUST00000107935 Chchd5Q9CQP3 110 aa12.04□□□□□ -0.48
Shank1-202ENSMUST00000107935 Ckap5A2AGT5 2032 aaKnown RBP12.04□□□□□ -0.48
Shank1-202ENSMUST00000107935 P01812 117 aa12.04□□□□□ -0.48
Shank1-202ENSMUST00000107935 P18532 116 aa12.04□□□□□ -0.48
Shank1-202ENSMUST00000107935 P04219 140 aa12.04□□□□□ -0.48
Shank1-202ENSMUST00000107935 EpopQ7TNS8 369 aa12.03□□□□□ -0.48
Shank1-202ENSMUST00000107935 Pygo1Q9D0P5 417 aa12.03□□□□□ -0.48
Shank1-202ENSMUST00000107935 Cysrt1Q9D1E4 142 aa12.03□□□□□ -0.48
Shank1-202ENSMUST00000107935 Olfr311Q5NC59 308 aa12.03□□□□□ -0.48
Shank1-202ENSMUST00000107935 Igkv9-123A0A140T8N8 117 aa12.03□□□□□ -0.48
Shank1-202ENSMUST00000107935 Nbl1Q61477 178 aa12.03□□□□□ -0.48
Shank1-202ENSMUST00000107935 Trbv14A0A140T8L9 115 aa12.03□□□□□ -0.48
Shank1-202ENSMUST00000107935 Ndufa12Q7TMF3 145 aaKnown RBP12.03□□□□□ -0.48
Shank1-202ENSMUST00000107935 Q9CQM1 111 aa12.02□□□□□ -0.48
Shank1-202ENSMUST00000107935 Polr2aP08775 1970 aaKnown RBP12.02□□□□□ -0.48
Shank1-202ENSMUST00000107935 Ighv1-19A0A0A6YWX0 117 aa12.02□□□□□ -0.49
Shank1-202ENSMUST00000107935 BikO70337 150 aa12.02□□□□□ -0.49
Shank1-202ENSMUST00000107935 Ang2Q64438 145 aa12.02□□□□□ -0.49
Shank1-202ENSMUST00000107935 Trav11A0A0B4J1J9 114 aa12.01□□□□□ -0.49
Shank1-202ENSMUST00000107935 P01655 112 aa12.01□□□□□ -0.49
Shank1-202ENSMUST00000107935 Fam241bQ9D882 120 aa12.01□□□□□ -0.49
Shank1-202ENSMUST00000107935 Gm10881P01642 115 aa12.01□□□□□ -0.49
Shank1-202ENSMUST00000107935 Ighv1-31A0A0A6YWK5 117 aa12.01□□□□□ -0.49
Shank1-202ENSMUST00000107935 A0A1L1SR50 188 aa12.01□□□□□ -0.49
Shank1-202ENSMUST00000107935 Atp6v0e1Q9CQD8 81 aa12.01□□□□□ -0.49
Shank1-202ENSMUST00000107935 Scn5aQ9JJV9 2019 aa12.01□□□□□ -0.49
Shank1-202ENSMUST00000107935 NacaP70670 2187 aaKnown RBP12.01□□□□□ -0.49
Shank1-202ENSMUST00000107935 Atp5g3P56384 141 aa12.01□□□□□ -0.49
Shank1-202ENSMUST00000107935 Atp5g1Q9CR84 136 aa12.01□□□□□ -0.49
Shank1-202ENSMUST00000107935 Zgrf1Q0VGT4 1863 aa12.01□□□□□ -0.49
Shank1-202ENSMUST00000107935 Kif26bQ7TNC6 2112 aa12□□□□□ -0.49
Shank1-202ENSMUST00000107935 Gm20730A0A075B5J6 119 aa12□□□□□ -0.49
Shank1-202ENSMUST00000107935 Gm10384Q3UQ87 92 aa12□□□□□ -0.49
Shank1-202ENSMUST00000107935 Kiaa0100Q5SYL3 2234 aa12□□□□□ -0.49
Shank1-202ENSMUST00000107935 Dock1Q8BUR4 1865 aa12□□□□□ -0.49
Shank1-202ENSMUST00000107935 Csrp2P97314 193 aaKnown RBP12□□□□□ -0.49
Shank1-202ENSMUST00000107935 Gm10638F6QEG2 257 aa12□□□□□ -0.49
Shank1-202ENSMUST00000107935 Gm7075D3Z497 112 aa12□□□□□ -0.49
Shank1-202ENSMUST00000107935 P01837 106 aa12□□□□□ -0.49
Shank1-202ENSMUST00000107935 Rnf166Q3U9F6 237 aa12□□□□□ -0.49
Shank1-202ENSMUST00000107935 AngP21570 145 aa12□□□□□ -0.49
Shank1-202ENSMUST00000107935 Dmrtc1c1Q9D410 238 aa11.99□□□□□ -0.49
Shank1-202ENSMUST00000107935 Srsf2Q62093 221 aaKnown RBP11.99□□□□□ -0.49
Shank1-202ENSMUST00000107935 Ly75Q60767 1723 aa11.99□□□□□ -0.49
Shank1-202ENSMUST00000107935 Pip4p2Q9CZX7 257 aa11.99□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 52.8 ms