RNA–Protein interactions for RNA: ENST00000640853.1

LPP-222, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-222ENST00000640853 COL27A1Q8IZC6 1860 aaPredicted RBP1.98□□□□□ -2.09
LPP-222ENST00000640853 C9orf163Q8N9P6 203 aa1.98□□□□□ -2.09
LPP-222ENST00000640853 DNAH5Q8TE73 4624 aa1.97□□□□□ -2.09
LPP-222ENST00000640853 PKD1L1Q8TDX9 2849 aa1.97□□□□□ -2.09
LPP-222ENST00000640853 Q96NJ1 140 aa1.97□□□□□ -2.09
LPP-222ENST00000640853 Q6ZR54 194 aa1.97□□□□□ -2.09
LPP-222ENST00000640853 APOBP04114 4563 aaKnown RBP1.97□□□□□ -2.09
LPP-222ENST00000640853 VPS13BQ7Z7G8 4022 aa1.97□□□□□ -2.09
LPP-222ENST00000640853 LINC00304Q8N9R0 145 aa1.97□□□□□ -2.09
LPP-222ENST00000640853 KRTAP1-1Q07627 177 aa1.96□□□□□ -2.1
LPP-222ENST00000640853 HECTD4Q9Y4D8 3996 aa1.96□□□□□ -2.1
LPP-222ENST00000640853 SPRR4Q96PI1 79 aa1.96□□□□□ -2.1
LPP-222ENST00000640853 C9orf92A6NGG3 77 aa1.96□□□□□ -2.1
LPP-222ENST00000640853 ANAPC11Q9NYG5 84 aa1.95□□□□□ -2.1
LPP-222ENST00000640853 A0A0G2JQZ4 141 aa1.95□□□□□ -2.1
LPP-222ENST00000640853 DNAH9Q9NYC9 4486 aa1.94□□□□□ -2.1
LPP-222ENST00000640853 LINC01558Q9Y6Z2 57 aa1.94□□□□□ -2.1
LPP-222ENST00000640853 Q8NDZ9 215 aa1.94□□□□□ -2.1
LPP-222ENST00000640853 K7EIL1 84 aa1.94□□□□□ -2.1
LPP-222ENST00000640853 DNAH8Q96JB1 4490 aa1.94□□□□□ -2.1
LPP-222ENST00000640853 DSCR10P59022 87 aa1.94□□□□□ -2.1
LPP-222ENST00000640853 CELSR1Q9NYQ6 3014 aa1.93□□□□□ -2.1
LPP-222ENST00000640853 A0A087WTM6 91 aa1.93□□□□□ -2.1
LPP-222ENST00000640853 VWFP04275 2813 aa1.93□□□□□ -2.1
LPP-222ENST00000640853 WWC2-AS2Q96NR7 200 aa1.93□□□□□ -2.1
LPP-222ENST00000640853 TGP01266 2768 aa1.93□□□□□ -2.1
LPP-222ENST00000640853 KMT2AQ03164 3969 aa1.92□□□□□ -2.1
LPP-222ENST00000640853 TENM2Q9NT68 2774 aa1.92□□□□□ -2.1
LPP-222ENST00000640853 CASC10Q5T4H9 136 aa1.92□□□□□ -2.1
LPP-222ENST00000640853 ADM2Q7Z4H4 148 aa1.92□□□□□ -2.1
LPP-222ENST00000640853 SPRR1AP35321 89 aa1.92□□□□□ -2.1
LPP-222ENST00000640853 Q5VV11 94 aa1.92□□□□□ -2.1
LPP-222ENST00000640853 C20orf166-AS1Q96NR2 134 aa1.92□□□□□ -2.1
LPP-222ENST00000640853 DYNC1H1Q14204 4646 aaKnown RBP1.91□□□□□ -2.1
LPP-222ENST00000640853 VPS13CQ709C8 3753 aa1.91□□□□□ -2.1
LPP-222ENST00000640853 SPATA8Q6RVD6 105 aa1.91□□□□□ -2.1
LPP-222ENST00000640853 LINC00472Q9H8W2 130 aa1.91□□□□□ -2.1
LPP-222ENST00000640853 FAM229BQ4G0N7 80 aa1.91□□□□□ -2.1
LPP-222ENST00000640853 Q8N9P0 234 aaPredicted RBP1.91□□□□□ -2.1
LPP-222ENST00000640853 CSAG1Q6PB30 78 aa1.91□□□□□ -2.1
LPP-222ENST00000640853 A0A1B0GU33 70 aa1.91□□□□□ -2.1
LPP-222ENST00000640853 A6NN06 94 aa1.91□□□□□ -2.1
LPP-222ENST00000640853 ALMS1Q8TCU4 4167 aa1.9□□□□□ -2.11
LPP-222ENST00000640853 DYNC2H1Q8NCM8 4307 aaKnown RBP1.9□□□□□ -2.11
LPP-222ENST00000640853 Q6ZSA8 131 aa1.9□□□□□ -2.11
LPP-222ENST00000640853 R4GN34 69 aa1.9□□□□□ -2.11
LPP-222ENST00000640853 DMDP11532 3685 aa1.9□□□□□ -2.11
LPP-222ENST00000640853 SACSQ9NZJ4 4579 aa1.9□□□□□ -2.11
LPP-222ENST00000640853 WDFY3Q8IZQ1 3526 aa1.9□□□□□ -2.11
LPP-222ENST00000640853 FAT3Q8TDW7 4589 aa1.9□□□□□ -2.11
LPP-222ENST00000640853 ZCCHC13Q8WW36 166 aaKnown RBP1.89□□□□□ -2.11
LPP-222ENST00000640853 SPRR1BP22528 89 aa1.89□□□□□ -2.11
LPP-222ENST00000640853 KRTAP26-1Q6PEX3 210 aa1.89□□□□□ -2.11
LPP-222ENST00000640853 SMR3BP02814 79 aaPredicted RBP1.88□□□□□ -2.11
LPP-222ENST00000640853 BIRC6Q9NR09 4857 aa1.88□□□□□ -2.11
LPP-222ENST00000640853 CSMD3Q7Z407 3707 aa1.88□□□□□ -2.11
LPP-222ENST00000640853 Q8N1X5 172 aa1.88□□□□□ -2.11
LPP-222ENST00000640853 NOTCH2NLQ7Z3S9 236 aa1.88□□□□□ -2.11
LPP-222ENST00000640853 LAMA5O15230 3695 aa1.88□□□□□ -2.11
LPP-222ENST00000640853 KRTAP19-4Q3LI73 84 aa1.88□□□□□ -2.11
LPP-222ENST00000640853 HRNRQ86YZ3 2850 aaPredicted RBP1.87□□□□□ -2.11
LPP-222ENST00000640853 ZFHX4Q86UP3 3567 aa1.87□□□□□ -2.11
LPP-222ENST00000640853 ZNF469Q96JG9 3925 aaPredicted RBP1.87□□□□□ -2.11
LPP-222ENST00000640853 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP1.87□□□□□ -2.11
LPP-222ENST00000640853 KRTAP29-1A8MX34 341 aaPredicted RBP1.86□□□□□ -2.11
LPP-222ENST00000640853 LRP1BQ9NZR2 4599 aa1.86□□□□□ -2.11
LPP-222ENST00000640853 PKHD1L1Q86WI1 4243 aa1.86□□□□□ -2.11
LPP-222ENST00000640853 FAT1Q14517 4588 aa1.86□□□□□ -2.11
LPP-222ENST00000640853 PLAC8Q9NZF1 115 aa1.86□□□□□ -2.11
LPP-222ENST00000640853 SMG1Q96Q15 3661 aaKnown RBP1.86□□□□□ -2.11
LPP-222ENST00000640853 Q5VSD8 79 aa1.86□□□□□ -2.11
LPP-222ENST00000640853 Q5W150 140 aa1.86□□□□□ -2.11
LPP-222ENST00000640853 LCE6AA0A183 80 aa1.85□□□□□ -2.11
LPP-222ENST00000640853 KRTAP4-16G5E9R7 235 aaPredicted RBP1.85□□□□□ -2.11
LPP-222ENST00000640853 OTOGQ6ZRI0 2925 aa1.85□□□□□ -2.11
LPP-222ENST00000640853 MMP24-AS1A0A0U1RRL7 71 aa1.85□□□□□ -2.11
LPP-222ENST00000640853 FBN1P35555 2871 aaKnown RBP1.84□□□□□ -2.11
LPP-222ENST00000640853 SPENQ96T58 3664 aaKnown RBP1.84□□□□□ -2.12
LPP-222ENST00000640853 LYSTQ99698 3801 aa1.83□□□□□ -2.12
LPP-222ENST00000640853 DNHD1Q96M86 4753 aa1.83□□□□□ -2.12
LPP-222ENST00000640853 MYCBP2O75592 4640 aa1.83□□□□□ -2.12
LPP-222ENST00000640853 FAT2Q9NYQ8 4349 aa1.82□□□□□ -2.12
LPP-222ENST00000640853 FBN3Q75N90 2809 aa1.82□□□□□ -2.12
LPP-222ENST00000640853 KRTAP23-1A1A580 65 aa1.82□□□□□ -2.12
LPP-222ENST00000640853 S4R3F8 94 aa1.82□□□□□ -2.12
LPP-222ENST00000640853 A8MU10 97 aa1.82□□□□□ -2.12
LPP-222ENST00000640853 ASPMQ8IZT6 3477 aa1.81□□□□□ -2.12
LPP-222ENST00000640853 FLGP20930 4061 aaPredicted RBP1.81□□□□□ -2.12
LPP-222ENST00000640853 RYR3Q15413 4870 aa1.81□□□□□ -2.12
LPP-222ENST00000640853 KRTAP7-1Q8IUC3 87 aa1.8□□□□□ -2.12
LPP-222ENST00000640853 COL7A1Q02388 2944 aa1.8□□□□□ -2.12
LPP-222ENST00000640853 RPL37P61927 97 aaKnown RBP1.8□□□□□ -2.12
LPP-222ENST00000640853 RYR1P21817 5038 aa1.79□□□□□ -2.12
LPP-222ENST00000640853 CUBNO60494 3623 aa1.79□□□□□ -2.12
LPP-222ENST00000640853 SVEP1Q4LDE5 3571 aa1.78□□□□□ -2.12
LPP-222ENST00000640853 PKHD1P08F94 4074 aa1.78□□□□□ -2.12
LPP-222ENST00000640853 KRTAP1-5Q9BYS1 174 aa1.78□□□□□ -2.12
LPP-222ENST00000640853 KRTAP10-1P60331 282 aa1.78□□□□□ -2.12
LPP-222ENST00000640853 C10orf95Q9H7T3 257 aa1.78□□□□□ -2.12
LPP-222ENST00000640853 M0QZ58 72 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms