RNA–Protein interactions for RNA: ENST00000640523.1

KCNMA1-283, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-283ENST00000640523 TACC2O95359 2948 aa12.69□□□□□ -0.38
KCNMA1-283ENST00000640523 C20orf166-AS1Q96NR2 134 aa12.64□□□□□ -0.39
KCNMA1-283ENST00000640523 UTP20O75691 2785 aaKnown RBP12.64□□□□□ -0.39
KCNMA1-283ENST00000640523 FLNCQ14315 2725 aa12.59□□□□□ -0.39
KCNMA1-283ENST00000640523 HIVEP1P15822 2718 aa12.58□□□□□ -0.4
KCNMA1-283ENST00000640523 FRYLO94915 3013 aa12.56□□□□□ -0.4
KCNMA1-283ENST00000640523 ATMQ13315 3056 aa12.55□□□□□ -0.4
KCNMA1-283ENST00000640523 ADGRG4Q8IZF6 3080 aa12.54□□□□□ -0.4
KCNMA1-283ENST00000640523 NIPBLQ6KC79 2804 aaeCLIP12.53□□□□□ -0.4
KCNMA1-283ENST00000640523 EYSQ5T1H1 3165 aa12.5□□□□□ -0.41
KCNMA1-283ENST00000640523 BOD1L1Q8NFC6 3051 aa12.49□□□□□ -0.41
KCNMA1-283ENST00000640523 LRBAP50851 2863 aa12.48□□□□□ -0.41
KCNMA1-283ENST00000640523 SPTBN5Q9NRC6 3674 aaKnown RBP12.47□□□□□ -0.41
KCNMA1-283ENST00000640523 COL6A3P12111 3177 aa12.44□□□□□ -0.42
KCNMA1-283ENST00000640523 H0YAA0 97 aa12.43□□□□□ -0.42
KCNMA1-283ENST00000640523 TNP1P09430 55 aa12.43□□□□□ -0.42
KCNMA1-283ENST00000640523 KMT2BQ9UMN6 2715 aaPredicted RBP12.42□□□□□ -0.42
KCNMA1-283ENST00000640523 COL12A1Q99715 3063 aa12.41□□□□□ -0.42
KCNMA1-283ENST00000640523 CELSR2Q9HCU4 2923 aa12.4□□□□□ -0.42
KCNMA1-283ENST00000640523 C10orf95Q9H7T3 257 aa12.39□□□□□ -0.43
KCNMA1-283ENST00000640523 MYO15AQ9UKN7 3530 aa12.35□□□□□ -0.43
KCNMA1-283ENST00000640523 PP632Q6XCG6 107 aa12.32□□□□□ -0.44
KCNMA1-283ENST00000640523 REV3LO60673 3130 aa12.31□□□□□ -0.44
KCNMA1-283ENST00000640523 ZZEF1O43149 2961 aa12.25□□□□□ -0.45
KCNMA1-283ENST00000640523 P0C880 135 aa12.25□□□□□ -0.45
KCNMA1-283ENST00000640523 KRTAP1-4P0C5Y4 121 aa12.22□□□□□ -0.45
KCNMA1-283ENST00000640523 DCHS2Q6V1P9 2916 aa12.19□□□□□ -0.46
KCNMA1-283ENST00000640523 USP34Q70CQ2 3546 aa12.17□□□□□ -0.46
KCNMA1-283ENST00000640523 ZANQ9Y493 2812 aa12.13□□□□□ -0.47
KCNMA1-283ENST00000640523 CFAP47Q6ZTR5 3102 aa12.13□□□□□ -0.47
KCNMA1-283ENST00000640523 TENM4Q6N022 2769 aa12.12□□□□□ -0.47
KCNMA1-283ENST00000640523 XP32Q5T750 250 aa12.04□□□□□ -0.48
KCNMA1-283ENST00000640523 CRYBG3Q68DQ2 2970 aa12.03□□□□□ -0.48
KCNMA1-283ENST00000640523 LOC400499M0QZD8 3231 aa12.02□□□□□ -0.49
KCNMA1-283ENST00000640523 KRTAP10-8P60410 259 aa11.96□□□□□ -0.49
KCNMA1-283ENST00000640523 KRTAP13-3Q3SY46 172 aa11.96□□□□□ -0.49
KCNMA1-283ENST00000640523 TENM3Q9P273 2699 aa11.94□□□□□ -0.5
KCNMA1-283ENST00000640523 DMXL1Q9Y485 3027 aa11.93□□□□□ -0.5
KCNMA1-283ENST00000640523 A0A1B0GVY2 172 aa11.91□□□□□ -0.5
KCNMA1-283ENST00000640523 TNRC18O15417 2968 aaPredicted RBP11.9□□□□□ -0.5
KCNMA1-283ENST00000640523 TGP01266 2768 aa11.88□□□□□ -0.51
KCNMA1-283ENST00000640523 FBN2P35556 2912 aa11.87□□□□□ -0.51
KCNMA1-283ENST00000640523 WDFY3Q8IZQ1 3526 aa11.84□□□□□ -0.51
KCNMA1-283ENST00000640523 HRNRQ86YZ3 2850 aaPredicted RBP11.83□□□□□ -0.52
KCNMA1-283ENST00000640523 NF1P21359 2839 aa11.82□□□□□ -0.52
KCNMA1-283ENST00000640523 KRTAP21-3Q3LHN1 58 aa11.79□□□□□ -0.52
KCNMA1-283ENST00000640523 TENM1Q9UKZ4 2725 aa11.7□□□□□ -0.54
KCNMA1-283ENST00000640523 TPRXLQ17RH7 258 aa11.68□□□□□ -0.54
KCNMA1-283ENST00000640523 ASPMQ8IZT6 3477 aa11.59□□□□□ -0.55
KCNMA1-283ENST00000640523 KRTAP10-10P60014 251 aa11.59□□□□□ -0.55
KCNMA1-283ENST00000640523 KRTAP12-2P59991 146 aa11.54□□□□□ -0.56
KCNMA1-283ENST00000640523 ZFHX4Q86UP3 3567 aa11.54□□□□□ -0.56
KCNMA1-283ENST00000640523 DCHS1Q96JQ0 3298 aa11.54□□□□□ -0.56
KCNMA1-283ENST00000640523 RELNP78509 3460 aa11.52□□□□□ -0.57
KCNMA1-283ENST00000640523 CELSR1Q9NYQ6 3014 aa11.51□□□□□ -0.57
KCNMA1-283ENST00000640523 LAMA5O15230 3695 aa11.47□□□□□ -0.57
KCNMA1-283ENST00000640523 DMDP11532 3685 aa11.45□□□□□ -0.58
KCNMA1-283ENST00000640523 MXRA5Q9NR99 2828 aa11.45□□□□□ -0.58
KCNMA1-283ENST00000640523 PDZD2O15018 2839 aa11.44□□□□□ -0.58
KCNMA1-283ENST00000640523 PRO2289Q9P1D8 64 aa11.4□□□□□ -0.58
KCNMA1-283ENST00000640523 MUC3AQ02505 3323 aa11.39□□□□□ -0.59
KCNMA1-283ENST00000640523 KRTAP12-1P59990 96 aa11.38□□□□□ -0.59
KCNMA1-283ENST00000640523 TENM2Q9NT68 2774 aa11.35□□□□□ -0.59
KCNMA1-283ENST00000640523 KRTAP13-4Q3LI77 160 aa11.33□□□□□ -0.6
KCNMA1-283ENST00000640523 KRTAP3-1Q9BYR8 98 aa11.3□□□□□ -0.6
KCNMA1-283ENST00000640523 PKD1L1Q8TDX9 2849 aa11.2□□□□□ -0.62
KCNMA1-283ENST00000640523 CSMD1Q96PZ7 3565 aa11.17□□□□□ -0.62
KCNMA1-283ENST00000640523 SMG1Q96Q15 3661 aaKnown RBP11.16□□□□□ -0.62
KCNMA1-283ENST00000640523 VWFP04275 2813 aa11.07□□□□□ -0.64
KCNMA1-283ENST00000640523 KRTAP10-6P60371 365 aaPredicted RBP11.07□□□□□ -0.64
KCNMA1-283ENST00000640523 SVEP1Q4LDE5 3571 aa10.95□□□□□ -0.66
KCNMA1-283ENST00000640523 KRTAP15-1Q3LI76 137 aa10.87□□□□□ -0.67
KCNMA1-283ENST00000640523 CUBNO60494 3623 aa10.78□□□□□ -0.68
KCNMA1-283ENST00000640523 FBN3Q75N90 2809 aa10.77□□□□□ -0.68
KCNMA1-283ENST00000640523 FBN1P35555 2871 aaKnown RBP10.73□□□□□ -0.69
KCNMA1-283ENST00000640523 SRRM2Q9UQ35 2752 aaKnown RBP10.72□□□□□ -0.69
KCNMA1-283ENST00000640523 MEGF8Q7Z7M0 2845 aa10.69□□□□□ -0.7
KCNMA1-283ENST00000640523 KRTAP3-2Q9BYR7 98 aa10.65□□□□□ -0.7
KCNMA1-283ENST00000640523 SPENQ96T58 3664 aaKnown RBP10.62□□□□□ -0.71
KCNMA1-283ENST00000640523 INE1O15225 51 aa10.6□□□□□ -0.71
KCNMA1-283ENST00000640523 NBPF19A0A087WUL8 3843 aa10.59□□□□□ -0.71
KCNMA1-283ENST00000640523 KRTAP3-3Q9BYR6 98 aa10.56□□□□□ -0.72
KCNMA1-283ENST00000640523 CSMD2Q7Z408 3487 aa10.48□□□□□ -0.73
KCNMA1-283ENST00000640523 COL7A1Q02388 2944 aa10.44□□□□□ -0.74
KCNMA1-283ENST00000640523 BSNQ9UPA5 3926 aa10.36□□□□□ -0.75
KCNMA1-283ENST00000640523 ZFHX3Q15911 3703 aa10.34□□□□□ -0.75
KCNMA1-283ENST00000640523 OTOGQ6ZRI0 2925 aa10.31□□□□□ -0.76
KCNMA1-283ENST00000640523 ANK3Q12955 4377 aaKnown RBP10.19□□□□□ -0.78
KCNMA1-283ENST00000640523 MT1HL1P0DM35 61 aa10.18□□□□□ -0.78
KCNMA1-283ENST00000640523 KRTAP23-1A1A580 65 aa10.14□□□□□ -0.79
KCNMA1-283ENST00000640523 KRTAP10-12P60413 245 aa10.11□□□□□ -0.79
KCNMA1-283ENST00000640523 TRRAPQ9Y4A5 3859 aa10.08□□□□□ -0.8
KCNMA1-283ENST00000640523 CRCT1Q9UGL9 99 aa10.04□□□□□ -0.8
KCNMA1-283ENST00000640523 KRTAP10-4P60372 401 aaPredicted RBP9.99□□□□□ -0.81
KCNMA1-283ENST00000640523 KRTAP12-3P60328 96 aa9.97□□□□□ -0.81
KCNMA1-283ENST00000640523 VPS13CQ709C8 3753 aa9.95□□□□□ -0.82
KCNMA1-283ENST00000640523 LCE3AQ5TA76 89 aa9.85□□□□□ -0.83
KCNMA1-283ENST00000640523 LORP23490 312 aaPredicted RBP9.8□□□□□ -0.84
KCNMA1-283ENST00000640523 KRTAP4-5Q9BYR2 181 aa9.78□□□□□ -0.84
KCNMA1-283ENST00000640523 ZNF469Q96JG9 3925 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms