RNA–Protein interactions for RNA: ENST00000640393.1

RTTN-217, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,357 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-217ENST00000640393 C5orf56Q8N8D9 126 aa1.3□□□□□ -2.2
RTTN-217ENST00000640393 LINC00208Q96KT6 92 aa1.3□□□□□ -2.2
RTTN-217ENST00000640393 SPRR4Q96PI1 79 aa1.3□□□□□ -2.2
RTTN-217ENST00000640393 PLAC8Q9NZF1 115 aa1.3□□□□□ -2.2
RTTN-217ENST00000640393 KNL1Q8NG31 2342 aa1.3□□□□□ -2.2
RTTN-217ENST00000640393 SPTBP11277 2137 aa1.3□□□□□ -2.2
RTTN-217ENST00000640393 ZGRF1Q86YA3 2104 aa1.29□□□□□ -2.2
RTTN-217ENST00000640393 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.29□□□□□ -2.2
RTTN-217ENST00000640393 TRAV21A0A0B4J279 112 aa1.29□□□□□ -2.2
RTTN-217ENST00000640393 M0R1W7 72 aa1.29□□□□□ -2.2
RTTN-217ENST00000640393 STATHP02808 62 aa1.29□□□□□ -2.2
RTTN-217ENST00000640393 PRB3Q04118 309 aaPredicted RBP1.29□□□□□ -2.2
RTTN-217ENST00000640393 RPS27LQ71UM5 84 aaKnown RBP1.29□□□□□ -2.2
RTTN-217ENST00000640393 ARHGAP5-AS1Q96IT6 56 aa1.29□□□□□ -2.2
RTTN-217ENST00000640393 CCL19Q99731 98 aa1.29□□□□□ -2.2
RTTN-217ENST00000640393 CNFNQ9BYD5 112 aa1.29□□□□□ -2.2
RTTN-217ENST00000640393 TIMM8BQ9Y5J9 83 aaPredicted RBP1.29□□□□□ -2.2
RTTN-217ENST00000640393 MGAM2Q2M2H8 2515 aa1.28□□□□□ -2.2
RTTN-217ENST00000640393 CPSF4LA6NMK7 179 aaKnown RBP1.28□□□□□ -2.2
RTTN-217ENST00000640393 LINC01590Q5TEZ4 76 aa1.28□□□□□ -2.2
RTTN-217ENST00000640393 TRRAPQ9Y4A5 3859 aa1.28□□□□□ -2.2
RTTN-217ENST00000640393 HRNRQ86YZ3 2850 aaPredicted RBP1.27□□□□□ -2.21
RTTN-217ENST00000640393 ABCA4P78363 2273 aa1.27□□□□□ -2.21
RTTN-217ENST00000640393 TRGV1A0A0A0MS02 117 aa1.27□□□□□ -2.21
RTTN-217ENST00000640393 SPATA8Q6RVD6 105 aa1.27□□□□□ -2.21
RTTN-217ENST00000640393 WFDC9Q8NEX5 89 aa1.27□□□□□ -2.21
RTTN-217ENST00000640393 Q96NJ1 140 aa1.27□□□□□ -2.21
RTTN-217ENST00000640393 SMIM2Q9BVW6 85 aa1.27□□□□□ -2.21
RTTN-217ENST00000640393 UBR4Q5T4S7 5183 aa1.27□□□□□ -2.21
RTTN-217ENST00000640393 CACNA1CQ13936 2221 aa1.26□□□□□ -2.21
RTTN-217ENST00000640393 NCR3O14931 201 aa1.26□□□□□ -2.21
RTTN-217ENST00000640393 IAPPP10997 89 aa1.26□□□□□ -2.21
RTTN-217ENST00000640393 ACYP2P14621 99 aa1.26□□□□□ -2.21
RTTN-217ENST00000640393 Q6ZQY7 126 aa1.26□□□□□ -2.21
RTTN-217ENST00000640393 GAFA1Q96PS6 74 aa1.26□□□□□ -2.21
RTTN-217ENST00000640393 PRKDCP78527 4128 aaKnown RBP1.26□□□□□ -2.21
RTTN-217ENST00000640393 SONP18583 2426 aaKnown RBP1.26□□□□□ -2.21
RTTN-217ENST00000640393 ETDCA0A1B0GVM5 59 aa1.25□□□□□ -2.21
RTTN-217ENST00000640393 NDUFA4O00483 81 aa1.25□□□□□ -2.21
RTTN-217ENST00000640393 SPINK7P58062 85 aa1.25□□□□□ -2.21
RTTN-217ENST00000640393 KCNQ1DNQ9H478 68 aa1.25□□□□□ -2.21
RTTN-217ENST00000640393 LINC00472Q9H8W2 130 aa1.25□□□□□ -2.21
RTTN-217ENST00000640393 ZANQ9Y493 2812 aa1.25□□□□□ -2.21
RTTN-217ENST00000640393 VWFP04275 2813 aa1.25□□□□□ -2.21
RTTN-217ENST00000640393 MRPL33O75394 65 aaKnown RBP1.24□□□□□ -2.21
RTTN-217ENST00000640393 HAMPP81172 84 aa1.24□□□□□ -2.21
RTTN-217ENST00000640393 DEFB112Q30KQ8 113 aa1.24□□□□□ -2.21
RTTN-217ENST00000640393 RYR2Q92736 4967 aa1.24□□□□□ -2.21
RTTN-217ENST00000640393 NDUFA1O15239 70 aa1.23□□□□□ -2.21
RTTN-217ENST00000640393 DEFB110Q30KQ9 67 aa1.23□□□□□ -2.21
RTTN-217ENST00000640393 C10orf99Q6UWK7 81 aa1.23□□□□□ -2.21
RTTN-217ENST00000640393 AKAP6Q13023 2319 aa1.23□□□□□ -2.21
RTTN-217ENST00000640393 USF3Q68DE3 2245 aa1.23□□□□□ -2.21
RTTN-217ENST00000640393 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.23□□□□□ -2.21
RTTN-217ENST00000640393 WNK1Q9H4A3 2382 aa1.22□□□□□ -2.21
RTTN-217ENST00000640393 ANK3Q12955 4377 aaKnown RBP1.22□□□□□ -2.21
RTTN-217ENST00000640393 A0A1B0GU69 56 aa1.22□□□□□ -2.21
RTTN-217ENST00000640393 DEFB108AA8MXU0 73 aa1.22□□□□□ -2.21
RTTN-217ENST00000640393 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.22□□□□□ -2.21
RTTN-217ENST00000640393 LINC00308Q8TCZ7 52 aa1.22□□□□□ -2.21
RTTN-217ENST00000640393 TTTY10Q9BZA0 68 aa1.22□□□□□ -2.21
RTTN-217ENST00000640393 HERC2O95714 4834 aa1.22□□□□□ -2.21
RTTN-217ENST00000640393 DNAJC13O75165 2243 aa1.22□□□□□ -2.21
RTTN-217ENST00000640393 A0A096LNT2 108 aa1.21□□□□□ -2.21
RTTN-217ENST00000640393 SMIM11BQ8TCY0 68 aa1.21□□□□□ -2.21
RTTN-217ENST00000640393 TENM2Q9NT68 2774 aa1.21□□□□□ -2.22
RTTN-217ENST00000640393 RYR1P21817 5038 aa1.21□□□□□ -2.22
RTTN-217ENST00000640393 DEFB131BA0A096LNP1 70 aa1.21□□□□□ -2.22
RTTN-217ENST00000640393 LINC00959A0A1B0GUT2 108 aa1.21□□□□□ -2.22
RTTN-217ENST00000640393 COX7BP24311 80 aa1.21□□□□□ -2.22
RTTN-217ENST00000640393 CMYA5Q8N3K9 4069 aa1.2□□□□□ -2.22
RTTN-217ENST00000640393 TNCP24821 2201 aa1.2□□□□□ -2.22
RTTN-217ENST00000640393 CNTRLQ7Z7A1 2325 aa1.2□□□□□ -2.22
RTTN-217ENST00000640393 TENM3Q9P273 2699 aa1.2□□□□□ -2.22
RTTN-217ENST00000640393 CRIP1P50238 77 aa1.2□□□□□ -2.22
RTTN-217ENST00000640393 Q6ZRX8 168 aa1.2□□□□□ -2.22
RTTN-217ENST00000640393 DEFB106AQ8N104 65 aa1.2□□□□□ -2.22
RTTN-217ENST00000640393 PLAC4Q8WY50 150 aa1.2□□□□□ -2.22
RTTN-217ENST00000640393 COX14Q96I36 57 aa1.2□□□□□ -2.22
RTTN-217ENST00000640393 CSMD3Q7Z407 3707 aa1.19□□□□□ -2.22
RTTN-217ENST00000640393 LYSTQ99698 3801 aa1.19□□□□□ -2.22
RTTN-217ENST00000640393 COL7A1Q02388 2944 aa1.19□□□□□ -2.22
RTTN-217ENST00000640393 K7EIL1 84 aa1.19□□□□□ -2.22
RTTN-217ENST00000640393 POLR2KP53803 58 aaKnown RBP1.19□□□□□ -2.22
RTTN-217ENST00000640393 LINC00158P58513 81 aa1.19□□□□□ -2.22
RTTN-217ENST00000640393 PRCDQ00LT1 54 aa1.19□□□□□ -2.22
RTTN-217ENST00000640393 ABCA13Q86UQ4 5058 aa1.19□□□□□ -2.22
RTTN-217ENST00000640393 ABCA1O95477 2261 aa1.18□□□□□ -2.22
RTTN-217ENST00000640393 HECTD4Q9Y4D8 3996 aa1.18□□□□□ -2.22
RTTN-217ENST00000640393 GVQW2A0A096LPI5 108 aaPredicted RBP1.18□□□□□ -2.22
RTTN-217ENST00000640393 G3V318 75 aa1.18□□□□□ -2.22
RTTN-217ENST00000640393 SPINK13Q1W4C9 94 aa1.18□□□□□ -2.22
RTTN-217ENST00000640393 LINC00575Q6W349 94 aa1.18□□□□□ -2.22
RTTN-217ENST00000640393 H3BSH0 61 aa1.17□□□□□ -2.22
RTTN-217ENST00000640393 SSBP3-AS1Q7Z2R9 100 aa1.17□□□□□ -2.22
RTTN-217ENST00000640393 Q8IZM0 81 aa1.17□□□□□ -2.22
RTTN-217ENST00000640393 TP53AIP1Q9HCN2 124 aa1.17□□□□□ -2.22
RTTN-217ENST00000640393 DYNC2H1Q8NCM8 4307 aaKnown RBP1.16□□□□□ -2.22
RTTN-217ENST00000640393 CCL22O00626 93 aa1.16□□□□□ -2.22
RTTN-217ENST00000640393 LY6G6CO95867 125 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms