RNA–Protein interactions for RNA: ENST00000640099.1

NECAP1-224, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,313 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-224ENST00000640099 J3QL48 77 aa4.56□□□□□ -1.68
NECAP1-224ENST00000640099 LINC00483Q53H64 154 aa4.56□□□□□ -1.68
NECAP1-224ENST00000640099 BRK1Q8WUW1 75 aa4.56□□□□□ -1.68
NECAP1-224ENST00000640099 PSPHP1O15172 72 aa4.56□□□□□ -1.68
NECAP1-224ENST00000640099 C8orf17Q9NRJ1 99 aa4.56□□□□□ -1.68
NECAP1-224ENST00000640099 IGLV7-43P04211 117 aa4.55□□□□□ -1.68
NECAP1-224ENST00000640099 ALMS1Q8TCU4 4167 aa4.54□□□□□ -1.68
NECAP1-224ENST00000640099 A0A1B0GVX0 72 aa4.53□□□□□ -1.68
NECAP1-224ENST00000640099 RETNLBQ9BQ08 111 aa4.52□□□□□ -1.69
NECAP1-224ENST00000640099 KRTAP10-1P60331 282 aa4.51□□□□□ -1.69
NECAP1-224ENST00000640099 MRPL34Q9BQ48 92 aaKnown RBP4.5□□□□□ -1.69
NECAP1-224ENST00000640099 CYP4F30PQ9H0H9 118 aa4.5□□□□□ -1.69
NECAP1-224ENST00000640099 CD164Q04900 197 aa4.49□□□□□ -1.69
NECAP1-224ENST00000640099 A8MUN3 132 aa4.49□□□□□ -1.69
NECAP1-224ENST00000640099 Q5W150 140 aa4.47□□□□□ -1.69
NECAP1-224ENST00000640099 FAT2Q9NYQ8 4349 aa4.47□□□□□ -1.69
NECAP1-224ENST00000640099 H3BPC8 53 aa4.47□□□□□ -1.69
NECAP1-224ENST00000640099 PKD1P98161 4303 aa4.47□□□□□ -1.69
NECAP1-224ENST00000640099 KRTAP13-2Q52LG2 175 aa4.46□□□□□ -1.69
NECAP1-224ENST00000640099 COA5Q86WW8 74 aa4.46□□□□□ -1.69
NECAP1-224ENST00000640099 PRO0628Q9UI54 55 aa4.46□□□□□ -1.69
NECAP1-224ENST00000640099 VPS13BQ7Z7G8 4022 aa4.46□□□□□ -1.7
NECAP1-224ENST00000640099 ASB16-AS1Q495Z4 193 aa4.46□□□□□ -1.7
NECAP1-224ENST00000640099 C4orf48Q5BLP8 95 aa4.46□□□□□ -1.7
NECAP1-224ENST00000640099 TP53AIP1Q9HCN2 124 aa4.46□□□□□ -1.7
NECAP1-224ENST00000640099 PKHD1P08F94 4074 aa4.45□□□□□ -1.7
NECAP1-224ENST00000640099 A8MU10 97 aa4.44□□□□□ -1.7
NECAP1-224ENST00000640099 SPANXA2-OT1Q8N9U9 137 aa4.44□□□□□ -1.7
NECAP1-224ENST00000640099 Q1T7F1 81 aa4.44□□□□□ -1.7
NECAP1-224ENST00000640099 PRR15LQ9BU68 103 aa4.44□□□□□ -1.7
NECAP1-224ENST00000640099 IGLV7-46A0A075B6I9 117 aa4.43□□□□□ -1.7
NECAP1-224ENST00000640099 SMR3BP02814 79 aaPredicted RBP4.43□□□□□ -1.7
NECAP1-224ENST00000640099 SSBP3-AS1Q7Z2R9 100 aa4.43□□□□□ -1.7
NECAP1-224ENST00000640099 Q8N9P0 234 aaPredicted RBP4.43□□□□□ -1.7
NECAP1-224ENST00000640099 SPAG11AQ6PDA7 123 aa4.43□□□□□ -1.7
NECAP1-224ENST00000640099 LORP23490 312 aaPredicted RBP4.41□□□□□ -1.7
NECAP1-224ENST00000640099 LINC00313P59037 77 aa4.41□□□□□ -1.7
NECAP1-224ENST00000640099 C1orf195Q5TG92 126 aa4.41□□□□□ -1.7
NECAP1-224ENST00000640099 PLA2G1BP04054 148 aaKnown RBP4.41□□□□□ -1.7
NECAP1-224ENST00000640099 FAT1Q14517 4588 aa4.41□□□□□ -1.7
NECAP1-224ENST00000640099 CHKB-CPT1BH3BT56 60 aa4.41□□□□□ -1.7
NECAP1-224ENST00000640099 SACSQ9NZJ4 4579 aa4.4□□□□□ -1.7
NECAP1-224ENST00000640099 LCE2CQ5TA81 110 aa4.4□□□□□ -1.71
NECAP1-224ENST00000640099 Q5VV11 94 aa4.4□□□□□ -1.71
NECAP1-224ENST00000640099 Q6ZSA8 131 aa4.4□□□□□ -1.71
NECAP1-224ENST00000640099 HRES1P13985 223 aa4.39□□□□□ -1.71
NECAP1-224ENST00000640099 PRR26Q8N8Z3 221 aa4.39□□□□□ -1.71
NECAP1-224ENST00000640099 KRTAP1-4P0C5Y4 121 aa4.39□□□□□ -1.71
NECAP1-224ENST00000640099 TYMSOSQ8TAI1 123 aa4.38□□□□□ -1.71
NECAP1-224ENST00000640099 DYNC1H1Q14204 4646 aaKnown RBP4.37□□□□□ -1.71
NECAP1-224ENST00000640099 IGKV2D-30A0A075B6S6 120 aa4.37□□□□□ -1.71
NECAP1-224ENST00000640099 IGKV2-30P06310 120 aa4.37□□□□□ -1.71
NECAP1-224ENST00000640099 LOC101927531A0A1B0GV80 90 aa4.36□□□□□ -1.71
NECAP1-224ENST00000640099 V9GYY9 64 aa4.36□□□□□ -1.71
NECAP1-224ENST00000640099 KRTAP13-3Q3SY46 172 aa4.36□□□□□ -1.71
NECAP1-224ENST00000640099 C8orf87E5RJ46 101 aa4.35□□□□□ -1.71
NECAP1-224ENST00000640099 A6NED7 52 aa4.35□□□□□ -1.71
NECAP1-224ENST00000640099 LIMD2Q9BT23 127 aa4.35□□□□□ -1.71
NECAP1-224ENST00000640099 SPTSSBQ8NFR3 76 aa4.34□□□□□ -1.71
NECAP1-224ENST00000640099 FAM229AH3BQW9 127 aa4.33□□□□□ -1.72
NECAP1-224ENST00000640099 C9orf92A6NGG3 77 aa4.31□□□□□ -1.72
NECAP1-224ENST00000640099 KRTAP16-1A8MUX0 517 aa4.31□□□□□ -1.72
NECAP1-224ENST00000640099 SPINK7P58062 85 aa4.3□□□□□ -1.72
NECAP1-224ENST00000640099 LCA10Q71F78 164 aa4.3□□□□□ -1.72
NECAP1-224ENST00000640099 ACYP2P14621 99 aa4.29□□□□□ -1.72
NECAP1-224ENST00000640099 LINC00304Q8N9R0 145 aa4.29□□□□□ -1.72
NECAP1-224ENST00000640099 KMT2CQ8NEZ4 4911 aaKnown RBP4.29□□□□□ -1.72
NECAP1-224ENST00000640099 LINC01558Q9Y6Z2 57 aa4.28□□□□□ -1.72
NECAP1-224ENST00000640099 PMAIP1Q13794 54 aa4.28□□□□□ -1.72
NECAP1-224ENST00000640099 Q75L30 129 aa4.28□□□□□ -1.72
NECAP1-224ENST00000640099 SPINK1P00995 79 aa4.28□□□□□ -1.72
NECAP1-224ENST00000640099 APOBP04114 4563 aaKnown RBP4.27□□□□□ -1.73
NECAP1-224ENST00000640099 Q8N1X5 172 aa4.27□□□□□ -1.73
NECAP1-224ENST00000640099 C7orf65Q6ZTY9 151 aa4.26□□□□□ -1.73
NECAP1-224ENST00000640099 DMAC1Q96GE9 116 aa4.26□□□□□ -1.73
NECAP1-224ENST00000640099 LRP1Q07954 4544 aaKnown RBP4.23□□□□□ -1.73
NECAP1-224ENST00000640099 RYR2Q92736 4967 aa4.23□□□□□ -1.73
NECAP1-224ENST00000640099 FLG2Q5D862 2391 aaPredicted RBP4.22□□□□□ -1.73
NECAP1-224ENST00000640099 A0A1B0GU69 56 aa4.21□□□□□ -1.74
NECAP1-224ENST00000640099 CDC42SE1Q9NRR8 79 aa4.21□□□□□ -1.74
NECAP1-224ENST00000640099 A0A1B0GVY2 172 aa4.2□□□□□ -1.74
NECAP1-224ENST00000640099 DMBT1Q9UGM3 2413 aaPredicted RBP4.2□□□□□ -1.74
NECAP1-224ENST00000640099 SEC61GP60059 68 aa4.19□□□□□ -1.74
NECAP1-224ENST00000640099 MYCBP2O75592 4640 aa4.18□□□□□ -1.74
NECAP1-224ENST00000640099 KRTAP10-4P60372 401 aaPredicted RBP4.18□□□□□ -1.74
NECAP1-224ENST00000640099 PKHD1L1Q86WI1 4243 aa4.18□□□□□ -1.74
NECAP1-224ENST00000640099 LOC100996750A0A140TA64 210 aa4.18□□□□□ -1.74
NECAP1-224ENST00000640099 ATP11AUNQ6ZP68 121 aa4.18□□□□□ -1.74
NECAP1-224ENST00000640099 KRTAP4-6Q9BYQ5 205 aa4.18□□□□□ -1.74
NECAP1-224ENST00000640099 KRTAP21-3Q3LHN1 58 aa4.17□□□□□ -1.74
NECAP1-224ENST00000640099 RYR3Q15413 4870 aa4.13□□□□□ -1.75
NECAP1-224ENST00000640099 A6NN06 94 aa4.13□□□□□ -1.75
NECAP1-224ENST00000640099 RPS29P62273 56 aaKnown RBP4.12□□□□□ -1.75
NECAP1-224ENST00000640099 FAT3Q8TDW7 4589 aa4.11□□□□□ -1.75
NECAP1-224ENST00000640099 A8MUU9 505 aa4.11□□□□□ -1.75
NECAP1-224ENST00000640099 HSPG2P98160 4391 aa4.11□□□□□ -1.75
NECAP1-224ENST00000640099 C20orf166-AS1Q96NR2 134 aa4.11□□□□□ -1.75
NECAP1-224ENST00000640099 MIR22HGQ0VDD5 57 aa4.1□□□□□ -1.75
NECAP1-224ENST00000640099 KTN1-AS1Q86SY8 53 aa4.1□□□□□ -1.75
NECAP1-224ENST00000640099 KRTAP3-1Q9BYR8 98 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms