RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 LRBAP50851 2863 aa9.23□□□□□ -0.93
CACNA1A-253ENST00000637927 ZNF292O60281 2723 aa9.2□□□□□ -0.94
CACNA1A-253ENST00000637927 TNRC18O15417 2968 aaPredicted RBP9.19□□□□□ -0.94
CACNA1A-253ENST00000637927 ASB16-AS1Q495Z4 193 aa9.17□□□□□ -0.94
CACNA1A-253ENST00000637927 A6NN06 94 aa9.17□□□□□ -0.94
CACNA1A-253ENST00000637927 RPS29P62273 56 aaKnown RBP9.17□□□□□ -0.94
CACNA1A-253ENST00000637927 ASPMQ8IZT6 3477 aa9.16□□□□□ -0.94
CACNA1A-253ENST00000637927 BOD1L1Q8NFC6 3051 aa9.16□□□□□ -0.94
CACNA1A-253ENST00000637927 KMT2BQ9UMN6 2715 aaPredicted RBP9.11□□□□□ -0.95
CACNA1A-253ENST00000637927 DSPP15924 2871 aaKnown RBP9.11□□□□□ -0.95
CACNA1A-253ENST00000637927 KRTAP13-1Q8IUC0 172 aa9.11□□□□□ -0.95
CACNA1A-253ENST00000637927 FRYLO94915 3013 aa9.09□□□□□ -0.95
CACNA1A-253ENST00000637927 NSD1Q96L73 2696 aaPredicted RBP9.09□□□□□ -0.95
CACNA1A-253ENST00000637927 UBR5O95071 2799 aaPredicted RBP9.09□□□□□ -0.96
CACNA1A-253ENST00000637927 WDFY3Q8IZQ1 3526 aa9.08□□□□□ -0.96
CACNA1A-253ENST00000637927 DMXL2Q8TDJ6 3036 aa9.08□□□□□ -0.96
CACNA1A-253ENST00000637927 ITPR2Q14571 2701 aa9.03□□□□□ -0.96
CACNA1A-253ENST00000637927 DCHS1Q96JQ0 3298 aa9.03□□□□□ -0.96
CACNA1A-253ENST00000637927 ATMQ13315 3056 aa9.02□□□□□ -0.97
CACNA1A-253ENST00000637927 IGSF10Q6WRI0 2623 aa8.99□□□□□ -0.97
CACNA1A-253ENST00000637927 PRO2289Q9P1D8 64 aa8.99□□□□□ -0.97
CACNA1A-253ENST00000637927 XP32Q5T750 250 aa8.99□□□□□ -0.97
CACNA1A-253ENST00000637927 CRCT1Q9UGL9 99 aa8.98□□□□□ -0.97
CACNA1A-253ENST00000637927 ASH1LQ9NR48 2969 aaKnown RBP8.96□□□□□ -0.98
CACNA1A-253ENST00000637927 TACC2O95359 2948 aa8.95□□□□□ -0.98
CACNA1A-253ENST00000637927 APCP25054 2843 aa8.93□□□□□ -0.98
CACNA1A-253ENST00000637927 ADGRG4Q8IZF6 3080 aa8.88□□□□□ -0.99
CACNA1A-253ENST00000637927 LOC400499M0QZD8 3231 aa8.88□□□□□ -0.99
CACNA1A-253ENST00000637927 COL12A1Q99715 3063 aa8.87□□□□□ -0.99
CACNA1A-253ENST00000637927 DMXL1Q9Y485 3027 aa8.84□□□□□ -0.99
CACNA1A-253ENST00000637927 HIVEP1P15822 2718 aa8.82□□□□□ -1
CACNA1A-253ENST00000637927 H0YAA0 97 aa8.82□□□□□ -1
CACNA1A-253ENST00000637927 NBPF19A0A087WUL8 3843 aa8.8□□□□□ -1
CACNA1A-253ENST00000637927 KRTAP1-4P0C5Y4 121 aa8.8□□□□□ -1
CACNA1A-253ENST00000637927 UTP20O75691 2785 aaKnown RBP8.8□□□□□ -1
CACNA1A-253ENST00000637927 ITPR1Q14643 2758 aa8.78□□□□□ -1
CACNA1A-253ENST00000637927 ZZEF1O43149 2961 aa8.77□□□□□ -1.01
CACNA1A-253ENST00000637927 PP632Q6XCG6 107 aa8.74□□□□□ -1.01
CACNA1A-253ENST00000637927 ZFHX4Q86UP3 3567 aa8.74□□□□□ -1.01
CACNA1A-253ENST00000637927 CSMD1Q96PZ7 3565 aa8.73□□□□□ -1.01
CACNA1A-253ENST00000637927 LAMA5O15230 3695 aa8.73□□□□□ -1.01
CACNA1A-253ENST00000637927 KRTAP12-2P59991 146 aa8.71□□□□□ -1.01
CACNA1A-253ENST00000637927 NBEAQ8NFP9 2946 aa8.71□□□□□ -1.02
CACNA1A-253ENST00000637927 KRTAP21-3Q3LHN1 58 aa8.66□□□□□ -1.02
CACNA1A-253ENST00000637927 TENM4Q6N022 2769 aa8.65□□□□□ -1.03
CACNA1A-253ENST00000637927 TPRXLQ17RH7 258 aa8.62□□□□□ -1.03
CACNA1A-253ENST00000637927 FLNCQ14315 2725 aa8.61□□□□□ -1.03
CACNA1A-253ENST00000637927 RELNP78509 3460 aa8.6□□□□□ -1.03
CACNA1A-253ENST00000637927 CELSR2Q9HCU4 2923 aa8.56□□□□□ -1.04
CACNA1A-253ENST00000637927 KRTAP13-3Q3SY46 172 aa8.54□□□□□ -1.04
CACNA1A-253ENST00000637927 DMDP11532 3685 aa8.53□□□□□ -1.04
CACNA1A-253ENST00000637927 MUC3AQ02505 3323 aa8.52□□□□□ -1.05
CACNA1A-253ENST00000637927 KRTAP15-1Q3LI76 137 aa8.51□□□□□ -1.05
CACNA1A-253ENST00000637927 DCHS2Q6V1P9 2916 aa8.39□□□□□ -1.07
CACNA1A-253ENST00000637927 CELSR1Q9NYQ6 3014 aa8.38□□□□□ -1.07
CACNA1A-253ENST00000637927 TENM1Q9UKZ4 2725 aa8.35□□□□□ -1.07
CACNA1A-253ENST00000637927 SMG1Q96Q15 3661 aaKnown RBP8.33□□□□□ -1.08
CACNA1A-253ENST00000637927 SPENQ96T58 3664 aaKnown RBP8.31□□□□□ -1.08
CACNA1A-253ENST00000637927 TENM3Q9P273 2699 aa8.28□□□□□ -1.08
CACNA1A-253ENST00000637927 NF1P21359 2839 aa8.26□□□□□ -1.09
CACNA1A-253ENST00000637927 TENM2Q9NT68 2774 aa8.24□□□□□ -1.09
CACNA1A-253ENST00000637927 SVEP1Q4LDE5 3571 aa8.24□□□□□ -1.09
CACNA1A-253ENST00000637927 HRNRQ86YZ3 2850 aaPredicted RBP8.22□□□□□ -1.09
CACNA1A-253ENST00000637927 FBN2P35556 2912 aa8.21□□□□□ -1.09
CACNA1A-253ENST00000637927 ZANQ9Y493 2812 aa8.19□□□□□ -1.1
CACNA1A-253ENST00000637927 NIPBLQ6KC79 2804 aaeCLIP8.18□□□□□ -1.1
CACNA1A-253ENST00000637927 PKD1L1Q8TDX9 2849 aa8.14□□□□□ -1.11
CACNA1A-253ENST00000637927 KRTAP13-4Q3LI77 160 aa8.12□□□□□ -1.11
CACNA1A-253ENST00000637927 CUBNO60494 3623 aa8.1□□□□□ -1.11
CACNA1A-253ENST00000637927 VWFP04275 2813 aa8.07□□□□□ -1.12
CACNA1A-253ENST00000637927 TGP01266 2768 aa8.05□□□□□ -1.12
CACNA1A-253ENST00000637927 ZFHX3Q15911 3703 aa8.05□□□□□ -1.12
CACNA1A-253ENST00000637927 KRTAP12-1P59990 96 aa8.05□□□□□ -1.12
CACNA1A-253ENST00000637927 CSMD2Q7Z408 3487 aa7.99□□□□□ -1.13
CACNA1A-253ENST00000637927 PDZD2O15018 2839 aa7.98□□□□□ -1.13
CACNA1A-253ENST00000637927 ANK3Q12955 4377 aaKnown RBP7.93□□□□□ -1.14
CACNA1A-253ENST00000637927 KRTAP3-1Q9BYR8 98 aa7.9□□□□□ -1.14
CACNA1A-253ENST00000637927 LORP23490 312 aaPredicted RBP7.88□□□□□ -1.15
CACNA1A-253ENST00000637927 MXRA5Q9NR99 2828 aa7.87□□□□□ -1.15
CACNA1A-253ENST00000637927 KRTAP10-5P60370 271 aa7.82□□□□□ -1.16
CACNA1A-253ENST00000637927 BSNQ9UPA5 3926 aa7.78□□□□□ -1.16
CACNA1A-253ENST00000637927 KRTAP10-12P60413 245 aa7.78□□□□□ -1.16
CACNA1A-253ENST00000637927 VPS13CQ709C8 3753 aa7.78□□□□□ -1.16
CACNA1A-253ENST00000637927 KRTAP10-6P60371 365 aaPredicted RBP7.74□□□□□ -1.17
CACNA1A-253ENST00000637927 SRRM2Q9UQ35 2752 aaKnown RBP7.74□□□□□ -1.17
CACNA1A-253ENST00000637927 TRRAPQ9Y4A5 3859 aa7.71□□□□□ -1.17
CACNA1A-253ENST00000637927 HUWE1Q7Z6Z7 4374 aaKnown RBP7.68□□□□□ -1.18
CACNA1A-253ENST00000637927 KRTAP4-5Q9BYR2 181 aa7.68□□□□□ -1.18
CACNA1A-253ENST00000637927 CSMD3Q7Z407 3707 aa7.65□□□□□ -1.19
CACNA1A-253ENST00000637927 OTOGQ6ZRI0 2925 aa7.54□□□□□ -1.2
CACNA1A-253ENST00000637927 LCE3AQ5TA76 89 aa7.54□□□□□ -1.2
CACNA1A-253ENST00000637927 AKAP9Q99996 3911 aa7.53□□□□□ -1.2
CACNA1A-253ENST00000637927 MT1HL1P0DM35 61 aa7.49□□□□□ -1.21
CACNA1A-253ENST00000637927 FBN1P35555 2871 aaKnown RBP7.46□□□□□ -1.22
CACNA1A-253ENST00000637927 KRTAP8-1Q8IUC2 63 aa7.45□□□□□ -1.22
CACNA1A-253ENST00000637927 KRTAP12-3P60328 96 aa7.44□□□□□ -1.22
CACNA1A-253ENST00000637927 ALMS1Q8TCU4 4167 aa7.39□□□□□ -1.23
CACNA1A-253ENST00000637927 INE1O15225 51 aa7.38□□□□□ -1.23
CACNA1A-253ENST00000637927 MEGF8Q7Z7M0 2845 aa7.37□□□□□ -1.23
CACNA1A-253ENST00000637927 KRTAP3-3Q9BYR6 98 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms