RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 TENM2Q9NT68 2774 aa6.37□□□□□ -1.39
PSPC1-207ENST00000635251 PLECQ15149 4684 aaKnown RBP6.36□□□□□ -1.39
PSPC1-207ENST00000635251 C1orf134Q5TEV5 83 aa6.36□□□□□ -1.39
PSPC1-207ENST00000635251 LIMD2Q9BT23 127 aa6.36□□□□□ -1.39
PSPC1-207ENST00000635251 A0A087X002 238 aa6.36□□□□□ -1.39
PSPC1-207ENST00000635251 NOTCH2NLQ7Z3S9 236 aa6.36□□□□□ -1.39
PSPC1-207ENST00000635251 IGLV7-43P04211 117 aa6.35□□□□□ -1.39
PSPC1-207ENST00000635251 Q5VV11 94 aa6.35□□□□□ -1.39
PSPC1-207ENST00000635251 CIRBP-AS1Q8TBR5 109 aa6.35□□□□□ -1.39
PSPC1-207ENST00000635251 PRR15LQ9BU68 103 aa6.35□□□□□ -1.39
PSPC1-207ENST00000635251 C8orf87E5RJ46 101 aa6.34□□□□□ -1.39
PSPC1-207ENST00000635251 CHKB-CPT1BH3BT56 60 aa6.33□□□□□ -1.4
PSPC1-207ENST00000635251 KRTAP3-3Q9BYR6 98 aa6.32□□□□□ -1.4
PSPC1-207ENST00000635251 KRTAP3-2Q9BYR7 98 aa6.32□□□□□ -1.4
PSPC1-207ENST00000635251 LY6G6CO95867 125 aa6.32□□□□□ -1.4
PSPC1-207ENST00000635251 STARD9Q9P2P6 4700 aa6.29□□□□□ -1.4
PSPC1-207ENST00000635251 LOC101927531A0A1B0GV80 90 aa6.28□□□□□ -1.4
PSPC1-207ENST00000635251 SSBP3-AS1Q7Z2R9 100 aa6.28□□□□□ -1.4
PSPC1-207ENST00000635251 SPAG11AQ6PDA7 123 aa6.27□□□□□ -1.41
PSPC1-207ENST00000635251 HRES1P13985 223 aa6.27□□□□□ -1.41
PSPC1-207ENST00000635251 Q5W150 140 aa6.27□□□□□ -1.41
PSPC1-207ENST00000635251 KTN1-AS1Q86SY8 53 aa6.26□□□□□ -1.41
PSPC1-207ENST00000635251 A8MU10 97 aa6.25□□□□□ -1.41
PSPC1-207ENST00000635251 Q75L30 129 aa6.25□□□□□ -1.41
PSPC1-207ENST00000635251 VPS13DQ5THJ4 4388 aa6.25□□□□□ -1.41
PSPC1-207ENST00000635251 A6NED7 52 aa6.25□□□□□ -1.41
PSPC1-207ENST00000635251 A0A0A0MQY5 61 aa6.24□□□□□ -1.41
PSPC1-207ENST00000635251 KRTAP10-2P60368 255 aa6.23□□□□□ -1.41
PSPC1-207ENST00000635251 LINC01558Q9Y6Z2 57 aa6.23□□□□□ -1.41
PSPC1-207ENST00000635251 LINC00313P59037 77 aa6.22□□□□□ -1.41
PSPC1-207ENST00000635251 KRTAP13-3Q3SY46 172 aa6.21□□□□□ -1.42
PSPC1-207ENST00000635251 DNAH8Q96JB1 4490 aa6.2□□□□□ -1.42
PSPC1-207ENST00000635251 SPTSSBQ8NFR3 76 aa6.2□□□□□ -1.42
PSPC1-207ENST00000635251 RETNLBQ9BQ08 111 aa6.2□□□□□ -1.42
PSPC1-207ENST00000635251 HECTD4Q9Y4D8 3996 aa6.2□□□□□ -1.42
PSPC1-207ENST00000635251 MEGF8Q7Z7M0 2845 aa6.19□□□□□ -1.42
PSPC1-207ENST00000635251 LCA10Q71F78 164 aa6.19□□□□□ -1.42
PSPC1-207ENST00000635251 FRAS1Q86XX4 4008 aa6.19□□□□□ -1.42
PSPC1-207ENST00000635251 ACYP2P14621 99 aa6.18□□□□□ -1.42
PSPC1-207ENST00000635251 KRTAP13-2Q52LG2 175 aa6.18□□□□□ -1.42
PSPC1-207ENST00000635251 DNAH17Q9UFH2 4485 aa6.18□□□□□ -1.42
PSPC1-207ENST00000635251 FAM229AH3BQW9 127 aa6.18□□□□□ -1.42
PSPC1-207ENST00000635251 PRKDCP78527 4128 aaKnown RBP6.18□□□□□ -1.42
PSPC1-207ENST00000635251 KMT2AQ03164 3969 aa6.17□□□□□ -1.42
PSPC1-207ENST00000635251 DNAH2Q9P225 4427 aa6.16□□□□□ -1.42
PSPC1-207ENST00000635251 TGP01266 2768 aa6.15□□□□□ -1.42
PSPC1-207ENST00000635251 KRTAP10-1P60331 282 aa6.15□□□□□ -1.42
PSPC1-207ENST00000635251 CDC42SE1Q9NRR8 79 aa6.15□□□□□ -1.42
PSPC1-207ENST00000635251 ATP11AUNQ6ZP68 121 aa6.15□□□□□ -1.43
PSPC1-207ENST00000635251 SPINK7P58062 85 aa6.13□□□□□ -1.43
PSPC1-207ENST00000635251 Q6ZSA8 131 aa6.13□□□□□ -1.43
PSPC1-207ENST00000635251 DMAC1Q96GE9 116 aa6.12□□□□□ -1.43
PSPC1-207ENST00000635251 IGKV2-30P06310 120 aa6.11□□□□□ -1.43
PSPC1-207ENST00000635251 KRTAP16-1A8MUX0 517 aa6.09□□□□□ -1.43
PSPC1-207ENST00000635251 KRTAP1-4P0C5Y4 121 aa6.09□□□□□ -1.43
PSPC1-207ENST00000635251 ALMS1Q8TCU4 4167 aa6.08□□□□□ -1.44
PSPC1-207ENST00000635251 IGKV2D-30A0A075B6S6 120 aa6.08□□□□□ -1.44
PSPC1-207ENST00000635251 PLA2G1BP04054 148 aaKnown RBP6.08□□□□□ -1.44
PSPC1-207ENST00000635251 TYMSOSQ8TAI1 123 aa6.08□□□□□ -1.44
PSPC1-207ENST00000635251 A6NN06 94 aa6.05□□□□□ -1.44
PSPC1-207ENST00000635251 A0A1B0GU69 56 aa6.04□□□□□ -1.44
PSPC1-207ENST00000635251 DNAH6Q9C0G6 4158 aa6.03□□□□□ -1.44
PSPC1-207ENST00000635251 SPINK1P00995 79 aa6.02□□□□□ -1.44
PSPC1-207ENST00000635251 DNAH11Q96DT5 4516 aa6.02□□□□□ -1.45
PSPC1-207ENST00000635251 DNAH5Q8TE73 4624 aa6.02□□□□□ -1.45
PSPC1-207ENST00000635251 C7orf65Q6ZTY9 151 aa6.02□□□□□ -1.45
PSPC1-207ENST00000635251 LINC00304Q8N9R0 145 aa5.97□□□□□ -1.45
PSPC1-207ENST00000635251 LRP1BQ9NZR2 4599 aa5.95□□□□□ -1.46
PSPC1-207ENST00000635251 LINC01554Q52M75 96 aa5.95□□□□□ -1.46
PSPC1-207ENST00000635251 PKD1P98161 4303 aa5.93□□□□□ -1.46
PSPC1-207ENST00000635251 HYDINQ4G0P3 5121 aa5.93□□□□□ -1.46
PSPC1-207ENST00000635251 Q8N1X5 172 aa5.92□□□□□ -1.46
PSPC1-207ENST00000635251 UQCR11O14957 56 aa5.92□□□□□ -1.46
PSPC1-207ENST00000635251 SMR3BP02814 79 aaPredicted RBP5.92□□□□□ -1.46
PSPC1-207ENST00000635251 RPS29P62273 56 aaKnown RBP5.92□□□□□ -1.46
PSPC1-207ENST00000635251 MIR22HGQ0VDD5 57 aa5.91□□□□□ -1.46
PSPC1-207ENST00000635251 SPATA8Q6RVD6 105 aa5.91□□□□□ -1.46
PSPC1-207ENST00000635251 C9orf92A6NGG3 77 aa5.89□□□□□ -1.47
PSPC1-207ENST00000635251 FAT2Q9NYQ8 4349 aa5.88□□□□□ -1.47
PSPC1-207ENST00000635251 VPS13BQ7Z7G8 4022 aa5.85□□□□□ -1.47
PSPC1-207ENST00000635251 KMT2CQ8NEZ4 4911 aaKnown RBP5.85□□□□□ -1.47
PSPC1-207ENST00000635251 A8MUU9 505 aa5.82□□□□□ -1.48
PSPC1-207ENST00000635251 C20orf166-AS1Q96NR2 134 aa5.82□□□□□ -1.48
PSPC1-207ENST00000635251 RYR3Q15413 4870 aa5.81□□□□□ -1.48
PSPC1-207ENST00000635251 PRAC1Q96KF2 57 aa5.8□□□□□ -1.48
PSPC1-207ENST00000635251 ADM2Q7Z4H4 148 aa5.78□□□□□ -1.48
PSPC1-207ENST00000635251 A0A1B0GVY2 172 aa5.77□□□□□ -1.49
PSPC1-207ENST00000635251 KRTAP10-4P60372 401 aaPredicted RBP5.76□□□□□ -1.49
PSPC1-207ENST00000635251 KRTAP3-1Q9BYR8 98 aa5.73□□□□□ -1.49
PSPC1-207ENST00000635251 SEC61BP60468 96 aaKnown RBP5.72□□□□□ -1.49
PSPC1-207ENST00000635251 SACSQ9NZJ4 4579 aa5.71□□□□□ -1.49
PSPC1-207ENST00000635251 PKHD1P08F94 4074 aa5.7□□□□□ -1.5
PSPC1-207ENST00000635251 A0A1B0GU33 70 aa5.69□□□□□ -1.5
PSPC1-207ENST00000635251 H0YAA0 97 aa5.68□□□□□ -1.5
PSPC1-207ENST00000635251 DYNC1H1Q14204 4646 aaKnown RBP5.68□□□□□ -1.5
PSPC1-207ENST00000635251 COX6B2Q6YFQ2 88 aa5.67□□□□□ -1.5
PSPC1-207ENST00000635251 H1FX-AS1Q4G0G2 97 aa5.65□□□□□ -1.5
PSPC1-207ENST00000635251 CSAG1Q6PB30 78 aa5.63□□□□□ -1.51
PSPC1-207ENST00000635251 EPPK1P58107 5090 aaKnown RBP5.62□□□□□ -1.51
PSPC1-207ENST00000635251 RYR2Q92736 4967 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms