RNA–Protein interactions for RNA: ENST00000634760.1

SMARCA2-227, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 5,847 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-227ENST00000634760 TRIOO75962 3097 aa10.71□□□□□ -0.7
SMARCA2-227ENST00000634760 UBR5O95071 2799 aaPredicted RBP10.7□□□□□ -0.7
SMARCA2-227ENST00000634760 WDFY4Q6ZS81 3184 aa10.69□□□□□ -0.7
SMARCA2-227ENST00000634760 FRYQ5TBA9 3013 aa10.67□□□□□ -0.7
SMARCA2-227ENST00000634760 ITPR1Q14643 2758 aa10.67□□□□□ -0.7
SMARCA2-227ENST00000634760 KRTAP10-10P60014 251 aa10.66□□□□□ -0.7
SMARCA2-227ENST00000634760 STAB2Q8WWQ8 2551 aa10.65□□□□□ -0.7
SMARCA2-227ENST00000634760 UTP20O75691 2785 aaKnown RBP10.57□□□□□ -0.72
SMARCA2-227ENST00000634760 REV3LO60673 3130 aa10.57□□□□□ -0.72
SMARCA2-227ENST00000634760 EYSQ5T1H1 3165 aa10.56□□□□□ -0.72
SMARCA2-227ENST00000634760 VCANP13611 3396 aa10.54□□□□□ -0.72
SMARCA2-227ENST00000634760 APCP25054 2843 aa10.53□□□□□ -0.72
SMARCA2-227ENST00000634760 HIVEP1P15822 2718 aa10.53□□□□□ -0.72
SMARCA2-227ENST00000634760 LAMA1P25391 3075 aa10.52□□□□□ -0.73
SMARCA2-227ENST00000634760 USP34Q70CQ2 3546 aa10.49□□□□□ -0.73
SMARCA2-227ENST00000634760 SPEGQ15772 3267 aa10.44□□□□□ -0.74
SMARCA2-227ENST00000634760 MYO15AQ9UKN7 3530 aa10.44□□□□□ -0.74
SMARCA2-227ENST00000634760 KALRNO60229 2985 aa10.43□□□□□ -0.74
SMARCA2-227ENST00000634760 VPS13AQ96RL7 3174 aa10.4□□□□□ -0.74
SMARCA2-227ENST00000634760 LRBAP50851 2863 aa10.4□□□□□ -0.74
SMARCA2-227ENST00000634760 FLNCQ14315 2725 aa10.36□□□□□ -0.75
SMARCA2-227ENST00000634760 ATMQ13315 3056 aa10.32□□□□□ -0.76
SMARCA2-227ENST00000634760 KRTAP12-2P59991 146 aa10.32□□□□□ -0.76
SMARCA2-227ENST00000634760 NIPBLQ6KC79 2804 aaeCLIP10.32□□□□□ -0.76
SMARCA2-227ENST00000634760 KRTAP13-4Q3LI77 160 aa10.31□□□□□ -0.76
SMARCA2-227ENST00000634760 CELSR3Q9NYQ7 3312 aa10.3□□□□□ -0.76
SMARCA2-227ENST00000634760 COL12A1Q99715 3063 aa10.2□□□□□ -0.78
SMARCA2-227ENST00000634760 COL6A3P12111 3177 aa10.18□□□□□ -0.78
SMARCA2-227ENST00000634760 HRNRQ86YZ3 2850 aaPredicted RBP10.18□□□□□ -0.78
SMARCA2-227ENST00000634760 KRTAP12-1P59990 96 aa10.18□□□□□ -0.78
SMARCA2-227ENST00000634760 TNRC18O15417 2968 aaPredicted RBP10.17□□□□□ -0.78
SMARCA2-227ENST00000634760 FREM2Q5SZK8 3169 aa10.17□□□□□ -0.78
SMARCA2-227ENST00000634760 ADGRG4Q8IZF6 3080 aa10.15□□□□□ -0.78
SMARCA2-227ENST00000634760 KRTAP3-1Q9BYR8 98 aa10.12□□□□□ -0.79
SMARCA2-227ENST00000634760 TENM4Q6N022 2769 aa10.12□□□□□ -0.79
SMARCA2-227ENST00000634760 TACC2O95359 2948 aa10.11□□□□□ -0.79
SMARCA2-227ENST00000634760 ZZEF1O43149 2961 aa10.1□□□□□ -0.79
SMARCA2-227ENST00000634760 FRYLO94915 3013 aa10.08□□□□□ -0.8
SMARCA2-227ENST00000634760 DMXL2Q8TDJ6 3036 aa10.05□□□□□ -0.8
SMARCA2-227ENST00000634760 WDFY3Q8IZQ1 3526 aa10.05□□□□□ -0.8
SMARCA2-227ENST00000634760 DMDP11532 3685 aa9.97□□□□□ -0.81
SMARCA2-227ENST00000634760 BOD1L1Q8NFC6 3051 aa9.96□□□□□ -0.82
SMARCA2-227ENST00000634760 NBEAQ8NFP9 2946 aa9.94□□□□□ -0.82
SMARCA2-227ENST00000634760 CRYBG3Q68DQ2 2970 aa9.89□□□□□ -0.83
SMARCA2-227ENST00000634760 ASH1LQ9NR48 2969 aaKnown RBP9.89□□□□□ -0.83
SMARCA2-227ENST00000634760 CELSR2Q9HCU4 2923 aa9.89□□□□□ -0.83
SMARCA2-227ENST00000634760 KRTAP10-6P60371 365 aaPredicted RBP9.87□□□□□ -0.83
SMARCA2-227ENST00000634760 DCHS2Q6V1P9 2916 aa9.86□□□□□ -0.83
SMARCA2-227ENST00000634760 ZANQ9Y493 2812 aa9.8□□□□□ -0.84
SMARCA2-227ENST00000634760 LOC400499M0QZD8 3231 aa9.77□□□□□ -0.85
SMARCA2-227ENST00000634760 TGP01266 2768 aa9.77□□□□□ -0.85
SMARCA2-227ENST00000634760 KRTAP15-1Q3LI76 137 aa9.75□□□□□ -0.85
SMARCA2-227ENST00000634760 TENM2Q9NT68 2774 aa9.74□□□□□ -0.85
SMARCA2-227ENST00000634760 DMXL1Q9Y485 3027 aa9.71□□□□□ -0.85
SMARCA2-227ENST00000634760 MUC3AQ02505 3323 aa9.7□□□□□ -0.86
SMARCA2-227ENST00000634760 ASPMQ8IZT6 3477 aa9.66□□□□□ -0.86
SMARCA2-227ENST00000634760 ZFHX4Q86UP3 3567 aa9.65□□□□□ -0.86
SMARCA2-227ENST00000634760 MT1HL1P0DM35 61 aa9.64□□□□□ -0.87
SMARCA2-227ENST00000634760 NF1P21359 2839 aa9.64□□□□□ -0.87
SMARCA2-227ENST00000634760 ANK3Q12955 4377 aaKnown RBP9.63□□□□□ -0.87
SMARCA2-227ENST00000634760 CFAP47Q6ZTR5 3102 aa9.63□□□□□ -0.87
SMARCA2-227ENST00000634760 PDZD2O15018 2839 aa9.6□□□□□ -0.87
SMARCA2-227ENST00000634760 TENM1Q9UKZ4 2725 aa9.6□□□□□ -0.87
SMARCA2-227ENST00000634760 FBN2P35556 2912 aa9.59□□□□□ -0.87
SMARCA2-227ENST00000634760 CELSR1Q9NYQ6 3014 aa9.59□□□□□ -0.87
SMARCA2-227ENST00000634760 LAMA5O15230 3695 aa9.58□□□□□ -0.88
SMARCA2-227ENST00000634760 TENM3Q9P273 2699 aa9.54□□□□□ -0.88
SMARCA2-227ENST00000634760 KRTAP3-2Q9BYR7 98 aa9.52□□□□□ -0.88
SMARCA2-227ENST00000634760 KRTAP3-3Q9BYR6 98 aa9.51□□□□□ -0.89
SMARCA2-227ENST00000634760 MXRA5Q9NR99 2828 aa9.48□□□□□ -0.89
SMARCA2-227ENST00000634760 KRTAP10-4P60372 401 aaPredicted RBP9.45□□□□□ -0.9
SMARCA2-227ENST00000634760 ALMS1Q8TCU4 4167 aa9.44□□□□□ -0.9
SMARCA2-227ENST00000634760 INE1O15225 51 aa9.43□□□□□ -0.9
SMARCA2-227ENST00000634760 SMG1Q96Q15 3661 aaKnown RBP9.43□□□□□ -0.9
SMARCA2-227ENST00000634760 KRTAP23-1A1A580 65 aa9.41□□□□□ -0.9
SMARCA2-227ENST00000634760 RELNP78509 3460 aa9.38□□□□□ -0.91
SMARCA2-227ENST00000634760 KRTAP10-12P60413 245 aa9.37□□□□□ -0.91
SMARCA2-227ENST00000634760 DCHS1Q96JQ0 3298 aa9.37□□□□□ -0.91
SMARCA2-227ENST00000634760 SPENQ96T58 3664 aaKnown RBP9.31□□□□□ -0.92
SMARCA2-227ENST00000634760 HUWE1Q7Z6Z7 4374 aaKnown RBP9.25□□□□□ -0.93
SMARCA2-227ENST00000634760 CSMD1Q96PZ7 3565 aa9.24□□□□□ -0.93
SMARCA2-227ENST00000634760 BSNQ9UPA5 3926 aa9.22□□□□□ -0.93
SMARCA2-227ENST00000634760 OTOGQ6ZRI0 2925 aa9.09□□□□□ -0.95
SMARCA2-227ENST00000634760 KRTAP12-3P60328 96 aa9.09□□□□□ -0.95
SMARCA2-227ENST00000634760 SVEP1Q4LDE5 3571 aa9.09□□□□□ -0.95
SMARCA2-227ENST00000634760 NBPF19A0A087WUL8 3843 aa9.07□□□□□ -0.96
SMARCA2-227ENST00000634760 KRTAP4-5Q9BYR2 181 aa9.05□□□□□ -0.96
SMARCA2-227ENST00000634760 LCE3AQ5TA76 89 aa8.96□□□□□ -0.97
SMARCA2-227ENST00000634760 VWFP04275 2813 aa8.95□□□□□ -0.98
SMARCA2-227ENST00000634760 FBN1P35555 2871 aaKnown RBP8.89□□□□□ -0.99
SMARCA2-227ENST00000634760 PKD1L1Q8TDX9 2849 aa8.85□□□□□ -0.99
SMARCA2-227ENST00000634760 CRCT1Q9UGL9 99 aa8.82□□□□□ -1
SMARCA2-227ENST00000634760 DNAH2Q9P225 4427 aa8.82□□□□□ -1
SMARCA2-227ENST00000634760 LORP23490 312 aaPredicted RBP8.79□□□□□ -1
SMARCA2-227ENST00000634760 FBN3Q75N90 2809 aa8.76□□□□□ -1.01
SMARCA2-227ENST00000634760 VPS13CQ709C8 3753 aa8.75□□□□□ -1.01
SMARCA2-227ENST00000634760 CSMD2Q7Z408 3487 aa8.74□□□□□ -1.01
SMARCA2-227ENST00000634760 ZFHX3Q15911 3703 aa8.74□□□□□ -1.01
SMARCA2-227ENST00000634760 MEGF8Q7Z7M0 2845 aa8.73□□□□□ -1.01
SMARCA2-227ENST00000634760 DNAH9Q9NYC9 4486 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 182.7 ms